Erythranthe guttata (spotted monkey flower): 105953091
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Entry
105953091 CDS
T07346
Name
(RefSeq) uncharacterized protein LOC105953091 isoform X1
KO
K06100
symplekin
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105953091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egt03021
]
105953091
03019 Messenger RNA biogenesis [BR:
egt03019
]
105953091
Transcription machinery [BR:
egt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105953091
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
105953091
U7-dependent histone pre-mRNA processing factors
105953091
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_2
HEAT_EZ
RRT15
Adaptin_N
HEAT_GCN1_C
Motif
Other DBs
NCBI-GeneID:
105953091
NCBI-ProteinID:
XP_012832172
LinkDB
All DBs
Position
Unknown
AA seq
1354 aa
AA seq
DB search
MVGMMAGISREKIASRINSIKYGGTDIGQKLDQLRRLGDDLAAVDSVLLVEFLSPIIDLL
SDRLSPVRKSVTRMIGEIGLKHLELLPEIIPALVDVLKDDTPAVARQAITCGIDIFRSSL
VKVTIQGLYSSGFNESQRSSWLSVLKFRDEIYSMAFKVGSEGRRLPALKFVESVLLLYTP
DPNASQEPPADQISEGEFEEFNISWLRGGHPILNVRDLSAEASQNLGLLLDQLRFPSLKS
HSYLVIIVLIKCLSEVARKRPAFYGRILPVLLGLDPSSSASKGMHLAGVNHALKNAFESC
LNCTHPGAAPWRDRLVGALKEIKVGKPTEHAALEISDNNGRAEWTGDSHVAQVHEDEKPS
IAFVNEHNNVGRKRGVELDASEFTEDDMSGKRARSTPDNSEGTKKEITEAQTPSRPDADS
GPVQQLVAMFGALAAQGEKAAASLEILVSSISADLLAEVVMANLRNLPPKIPKSEMNEEP
LGNTGVPHPDTVASESHINHLSLLLTDILAQPNSSPVGTEDPHHSVSTEPEQTEEEEPRV
TLADSNVAYDDLNYASQQATLSISESVTPDDIPSAMETDFTAITSEVNDMKSVEDEIPGL
ALSTQDDGLPENLAVSSKGLTDLDDANEEDFINPDRTPLELDNTPLEVDSTPLELDSTSL
ELDRTPIELAQSLSTDRSEELSPKAASTDTNMNSSTATSVRLLPQLVLPKISAPVIHLAD
DQKDQLQELAFVRIVEAYKHVTVAGGSQTRFSILAHSGMEFPSELDPWKLLKAHILSDYV
NHEGHELTLRVLYRLFGEAEEDRDFFISTTATSVYETFLLQVAETLRDSFPASDKSLSRL
LGEVPYLPKSLFAMLESLCCPGSSDNDDKELHGGDRVTQGLSTVWSLMLLRPPIRDACLK
IALKSAVHHSEEVRMKAIRLVANKLYPLSFISEKIEDFAKEMLLSVVGDDQITLTKEGDG
TLAEVQKDENPSSENQPASSAIKEISVDTHQLSASESIPSSTVAEVQRCMSLYFALCTKK
HSLLRQIFDVYKDTSKMAKQTVHRQIPLLVRTIGSSRDLLDVVSNPPAGSEELIIQVVQI
LTDGTVPSPELVSTIKRLYNIKLKDVDILIPILPFLPKDEVLLVFPHLVNAPSDKFQVVL
SRVLQGLNHSTPVLTPAEALIAIHGIDPDRDGIPLKKVTDACNACFEQQHIFTQQVLAKV
LNQLVEQIPLPLLFMRTVLQAIGAFPSLVEFIMEILNRLVSKQIWKNPKLWVGFMKCALL
TKPQSFGVLLQLPTTQLENALNRTQALRAPLVAHASQPHIRSSLPRSTLVVLGIVSDVQA
PTQTQPTQTQTTTETDNTDKETVTDKSKESSTAS
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaatgatggcggggatatctcgagagaaaattgcgagcagaatcaactcaata
aagtacggaggtaccgacattggtcagaagctcgaccagttgcggcggcttggtgatgat
ctcgccgccgtggattctgtgttgctggtggagttcctctcccctattattgacctccta
tctgaccgtttaagccccgtccgaaaatctgttactcggatgattggtgaaattggttta
aagcacttggagttgttacctgaaataataccggcactggttgatgttttgaaagacgat
accccagctgttgctcgacaggctatcacatgcgggattgatatatttcgcagttctcta
gttaaagtcaccatccaggggttgtactcgagcggattcaacgaatcacagagatcatcg
tggctatcagtgctaaagtttagagatgaaatatattcgatggcatttaaagtgggaagt
gaagggagaaggttgcctgcattgaaattcgtggaatctgttctgctactttatactcct
gatcctaatgcctctcaggaaccacctgctgatcaaatttctgaaggggagtttgaggaa
ttcaatatctcatggcttcgtggtgggcatcccatactcaatgtcagagatttgtctgct
gaagcaagccaaaatttgggtctactgctagatcagctgagattcccatctttgaaatca
catagttacttggtgatcattgtactaattaaatgtctttcggaagtagcaaggaagagg
ccagccttttatggtcgtatactgcctgttttacttggcttggatccttcaagctctgct
agcaaaggcatgcatcttgctggggtgaatcatgctctgaagaatgcttttgagtcttgt
ttgaattgtacgcaccctggtgctgcaccgtggcgggatcgtctagttggtgcactgaaa
gaaattaaagttggaaaaccaacggaacatgctgccttagaaatatctgataacaatggg
agagcagagtggacaggtgattcgcacgtggctcaagttcatgaggatgaaaaaccttct
atagcatttgtgaacgaacataataatgttggtaggaaaagaggtgtagagctagacgca
tcagagtttactgaagatgacatgtcaggaaaacgtgctagatcaactcctgacaactca
gagggaacaaaaaaagaaattacagaggcacaaacaccgtctagaccagatgcagatagt
ggacctgtgcagcagcttgttgctatgtttggtgcattggctgctcagggggagaaagct
gctgcttctttggagattctcgtctcaagcatatcagctgatttgttagctgaagtagtt
atggctaatttacggaatcttcctccaaaaatccctaaatctgaaatgaatgaagagcca
ctgggcaatacaggtgttcctcatcctgatactgttgcaagtgaaagtcacatcaaccat
ttgtctttgctgctgacagacattctcgcacaacctaactcttctccagttggaacagaa
gaccctcatcattcagtatccactgagcctgagcaaactgaagaagaggaaccacgtgta
actttggctgatagtaatgttgcatatgatgatttgaattatgcaagtcaacaagcaaca
ttgtctattagtgagtctgttactcccgatgatataccttctgcaatggagactgatttt
acagcaattacatctgaagtcaatgatatgaagagtgtggaagatgaaatacctggactt
gctttgtccactcaggatgatggattgcctgaaaatctagctgtttcttccaagggtttg
actgatttagatgatgccaatgaagaagattttattaatccggataggacacccctagaa
ttagataatacacccctagaagtagatagtacacccctagaattagatagtacatcccta
gaattagataggacacctatagaactagctcaatcattgtctacagatagatctgaggaa
cttagcccaaaagcagcaagcacagacacaaacatgaattcctcaactgcaacgtctgtt
cggttgttaccacagttggttctgccgaagatatctgccccagttatccaccttgctgat
gatcaaaaggatcagttacaagaactagctttcgtacgcattgttgaggcatataagcat
gtcactgtcgctggagggtctcaaacccgcttttctattcttgcccattcaggaatggag
tttccgtcggagcttgatccatggaagttactgaaagcacatatattgtcggactatgtt
aatcatgaggggcatgagttaaccttgcgtgtcttataccggctatttggggaggcggaa
gaggaccgtgactttttcatctcaacaactgctacatctgtatatgaaacttttcttctc
caagtggcagaaacactgagagattcttttccagcctcggacaaatctttgagtagattg
ctcggtgaagttccgtatctgccaaaatctttatttgcaatgttagaatccttatgttgt
cctggtagcagtgataatgatgataaggaattgcatggtggagatcgagtaacccagggg
ctgagtactgtgtggagcctaatgttgctaagacctccaattcgagatgcttgtctcaaa
atcgctctaaagagtgcagttcatcactcggaagaagtgcggatgaaggcaatacgtttg
gtggcgaataagctttatcctttatcattcatatcagaaaaaattgaagactttgccaaa
gaaatgttgctatcagttgtaggtgatgatcaaattacactgacaaaggagggtgatgga
acccttgctgaggtacagaaggatgagaatccttcaagtgaaaatcaaccagcgagttct
gcaattaaagagatctcagttgatactcatcagctttcagcatctgaaagtattccatct
tctacggtagctgaggtgcaacgttgcatgtctctgtattttgcattgtgtacaaagaaa
cactctcttctccggcaaatctttgatgtttataaagatacatccaagatggcaaagcag
acagttcatcgtcaaatcccactacttgttcgaactattggctcatcccgtgatctcctt
gatgttgtatccaatccacctgctggaagtgaagagcttataattcaggttgtgcaaata
ctgacagatggaacagttccttctccagagttggtatctaccattaagaggttatacaat
ataaagctaaaggatgtagatattctgattccaattttaccattcctgccaaaagacgag
gttttacttgttttcccacatcttgtgaatgcaccatcggataagtttcaagttgtgctt
tcgcgtgtccttcagggattgaaccattctactccagtgctcactccagccgaagcatta
attgctatccatgggattgatcctgacagagacggaattcccttgaaaaaggtgacagat
gcttgtaatgcttgttttgaacagcaacatatatttactcagcaagttctggccaaggtc
ttgaatcaattggttgagcaaattcctcttcccttgctttttatgcgcacagtattgcaa
gccattggtgcttttccttccttggtggaattcataatggagattcttaatcgcctcgta
agcaagcagatatggaaaaatccgaagctgtgggtgggattcatgaagtgtgctcttttg
acaaagccacagtcttttggtgttctgcttcagttacctacaacacagcttgaaaatgca
ttaaatagaacacaagctctgagggctcctttagttgcccacgcaagccaaccacacata
agatcttcgcttccaaggtctacactagtggttcttggtatcgtgtcagatgtgcaagca
cctactcagacacaacctactcaaactcagaccaccacagagacggataatacagataaa
gaaactgtcaccgataagtcaaaggaatcatctaccgccagttga
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integrated database retrieval system
