Erythranthe guttata (spotted monkey flower): 105953307
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Entry
105953307 CDS
T07346
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105953307
03036 Chromosome and associated proteins [BR:
egt03036
]
105953307
Enzymes [BR:
egt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
105953307
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105953307
Chromosome and associated proteins [BR:
egt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
105953307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
ResIII
AAA_19
UvrD-helicase
DEAD
AAA_16
SLFN-g3_helicase
AAA_22
Helicase_RecD
UvrD_C_2
ATPase_2
NPHP3_N
PIF1
Mg_chelatase
PhoH
AAA
Motif
Other DBs
NCBI-GeneID:
105953307
NCBI-ProteinID:
XP_012832422
UniProt:
A0A022RNC2
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MSSVHNKSDDEYSVIGDKGDIGFIDYDNCKSICSYNPSEESQFVNISVPFPLVGGKPQSG
FVGETIFHPVTIKNTTNEPLDLWSVSIYDSKPENSFTISLKEPPKADSGVEYIQAFMETF
SLEDRVIGPEQSLTVYLSCKPKEIGVHSAAVHFSVGDETIERVVFLLAEDKISHSLFSAK
PYQRSRRKKQDVVNVHAADAAYIVGHRPSRGSGSGFRYRLSDYPVPANIREMVHNQQIPD
AVNEGLTERNYGFFFKTLLAMEEIKLEEDMRAYDMECVSMKSKRNQFLTLEVPGLAEKRP
SLVNGDHIFVKLASEDQNPNPAYQGYIHRVEAEEIYLKFDQAFHRIHRDCNLYNVQFNYN
RTGMRRLYQAVEAAGSLDRNFLFPSTSFNARTVKPNPMVPISPNLNDEQMRAVQMILASR
GGPPYVIHGPPGTGKTMTLIEAILQIYRSKRNARVLVCAPSNSAADHILERLVSQELVQI
HKNEIFRLNAYTRSFEDVNPNLIEFCCVEDFIFKCPSRYDLVKYKIIISTYTSASLLYSE
GVRRGHFSYFFLDEAGQASEPETLVPLSHLYREDTVAVLAGDPMQLGPVVFSGDAESYGL
GISFMERLFDCELYSSGNESFMTKLVRNYRTHEAILKLPSELFYYGELIPSKEEESCLYS
TTSSWEDLIPDKEFPMLFIGIQGCDEREGSNPSWFNRIEASKVVEIIRVLIEEKGMKEED
IGVITPYRQQVCKIRGALEMLGMGDARVGSVEQFQGQEREVIIISTVRSTVKHNEFDRLH
YLGFLSNSRRFNVAITRARSLLVVIGNPHILCKDPYWNNLLWYCVDNDSYKGCFLPERED
LSVEGPPEYTEEQYPSGEVANDFQPSDGNWDEKGDEWQSAQVQWGPSDVPWTGAENDDVP
WE
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgttcacaacaaatcggacgatgaatactcagtcatcggagacaaaggtgac
atcggattcatcgattacgacaactgcaaatcgatctgcagctacaatccatccgaggag
agccaattcgtaaatatctccgtcccgtttcctctagtcggaggcaaacctcaatcagga
ttcgtgggagaaactatattccaccctgtcactatcaagaacaccacaaacgagccctta
gatctctggtcggtcagcatttacgactccaaacctgagaactcgttcaccatttctctc
aaagagcctccgaaagccgattcgggcgtggaatatatccaagcttttatggaaacattt
tcgttggaagacagggtgatagggccagaacagtcgttgactgtatacctatcgtgcaag
cctaaggaaatcggggttcattcggctgctgtgcatttcagcgtgggtgacgagacaatc
gaaagggtggttttccttttggccgaggataagatttctcattctttgttttccgcaaaa
ccgtaccaaagatcgcgcagaaagaaacaggatgtggtaaatgtgcatgctgcagatgct
gcgtacattgttgggcatcggccctcgaggggttcgggtagcgggttccgatatcgactg
tcggattatcctgttccggcaaatattcgggaaatggtgcataatcagcagatccccgat
gcggtcaacgagggtttgaccgagaggaactacgggttttttttcaagactttgcttgcg
atggaagagataaagttggaggaggatatgcgagcatatgacatggagtgtgtctcgatg
aagagcaaacggaaccagttcttgactcttgaggtacccggattggctgagaaacggcct
tcactcgttaacggggaccacatattcgtgaagcttgctagtgaggatcaaaatccaaat
cctgcatatcagggatacattcacagggtagaagccgaagaaatttacttgaagttcgac
caagcattccaccgcatccacagagattgcaacctctacaacgtgcagttcaactacaac
cgaacaggcatgcgacgcctctatcaagccgtagaagcagccggatctttagatcgcaac
tttctctttccatccacatcgttcaacgcaagaacagtaaaacccaatccgatggtcccg
atttctcctaacctaaacgacgaacaaatgagagccgttcagatgatcctcgcctcccga
ggcgggcccccctatgtaatccacgggccacctggcacaggcaagaccatgactctgatc
gaagccatcctccaaatctaccgttcgaaacgaaacgctcgtgttctcgtctgcgcacct
tcaaacagtgcagccgatcacatactcgaaagactcgtaagccaagaattggtgcaaatt
cataaaaatgagatctttagactcaatgcgtacacgcgctcgttcgaggacgtcaatccg
aacctcatcgaattctgctgcgtcgaagatttcatttttaaatgcccttcaagatatgat
ctcgtgaagtacaaaatcattatatctacttacacaagtgcgtctctattatactcggaa
ggcgttcggaggggtcatttctcgtattttttcttggacgaagctggacaagcttccgag
ccagaaacactggtcccactatcccatctttatagggaggacacggttgcagttcttgcg
ggcgatcctatgcagctaggtcccgtggtattctccggggatgcggagagttacggacta
ggaatctccttcatggagaggctcttcgactgcgagctgtacagcagcggaaacgagagt
ttcatgaccaaattggtcagaaattaccggacccacgaggcaattctaaagcttccttct
gaactcttttactacggtgaattgattccatcaaaggaagaagagtcatgtttgtactcg
acgacatcatcatgggaggatctaatcccggataaggagtttcctatgctgtttataggc
attcaaggctgcgacgaaagagaagggagcaatccatcttggttcaatagaatcgaggcg
agtaaagtggtcgaaataatcagggttttgatcgaggaaaaggggatgaaagaggaagat
attggtgttattacgccttacaggcagcaggtctgcaagataagaggggcactggaaatg
ctcggtatgggtgatgctagggttggaagcgtcgaacaatttcaggggcaagagagagaa
gttattattatatcaactgttcgttcgactgtgaagcataacgaattcgacaggcttcat
tacttagggttcttgagcaactcgaggaggttcaatgttgctattactcgagcgaggtct
ttgctcgtggttattgggaatccacacatcctatgcaaggatccatattggaacaatctg
ttatggtactgtgtggacaatgactcgtataagggttgctttctccccgaaagagaggat
ctcagtgttgaagggccacctgagtacacagaggaacaatacccgagcggtgaggtggcg
aacgatttccagccgtcggatgggaattgggatgagaaaggtgatgaatggcagtctgct
caagttcagtggggcccgtctgatgttccttggaccggggcagaaaacgatgatgtacca
tgggagtaa
DBGET
integrated database retrieval system
