Erythranthe guttata (spotted monkey flower): 105953673
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Entry
105953673 CDS
T07346
Name
(RefSeq) LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105953673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egt03041
]
105953673
Enzymes [BR:
egt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105953673
Spliceosome [BR:
egt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105953673
Complex C
U5 SnRNP specific factors
105953673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
AAA_30
T2SSE
DUF7863
Motif
Other DBs
NCBI-GeneID:
105953673
NCBI-ProteinID:
XP_012832806
LinkDB
All DBs
Position
Unknown
AA seq
2170 aa
AA seq
DB search
MAHPGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPETLWGKIDPKSFGDRAF
RDKPPELEEKLKKSKKKKEREPALDAAQPRSKKRRLQEESVLTSSEEGVYQPKTKETRAA
YEAMLSVIQQQLGGQPLNIVSGAADEILAVLKNDNLKNPDKKKEIEKLLNPISVSTFDEL
VKIGRLVTDYHDASDAGDAAVNGDDGLDDDVGVAVEFEENEEEEEESDLDMVPEDEEDDD
DVAEVDGSGAMQMGGIDDDEEQEANEGMTLNVQDIDAYWLQRKISQAYDQNIDPQQSQKL
AEEVLKILAEGDDREVENKLLVHLQFENFNLIKYLLRNRLKVVWCTRLARAEDQEKRKEI
EEEMKGLGPNHVAILDQLNATRATAKERQKDVEKRIREEARRLKDDGGDGVRDRHERVDR
DADGGWLKGQRQLLDLDNLAFNQGGLLMANKKCELPVGSYRNHRKGYEEVHVPALKPMPL
AAGEKLVKISDIPDWAQPAFKGMSQLNRVQSRVYETALFSAENILLCAPTGAGKTNVAML
TILQQIALNMNDDGSINHSNYKIVYVAPMKALVAEVVGNLSNRLEQYGVVVRELSGDQSL
TRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIIART
VRQIETTKEHIRLVGLSATLPNYDDVAVFLRVKLEKGLFHFDNSYRPVPLAQQYIGITVK
KPLQRFQLMNDVCYEKVVGVAGKHQVLIFVHSRKETSKTARAIRDTALEKDTLGKFLKED
SASREILQSHTELVKSNDLKDLLPFGFAIHHAGMVRADRQIVEELFADGHVQVLVSTATL
AWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSE
LQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKEACKWLLYTYLFVRMMRNPTL
YGLAADALKRDGSLEERRADLIHSAATVLDKNNLVKYDRKSGYFQVTDLGRIASYYYITH
GTVSTFNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKVELAKLLDRVPIPIKESLEEP
SAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLMRALFEIVLKRGWAQLAEKALKLC
KMIGRRMWSVQTPLRQFHGSPNEILMKIEKKDLAWERYYDLTSQEIGELIRFPKMGRTLH
KFIHQFPKLNLNAHVQPITRSVLRVELTITPDFQWDDKVHGYVEPFWILVEDNDGENILH
HEYFMLKKQYIDEDHTLNFTVPIFEPLPPQYFINVVSDRWLGAQSVLPISFRHLILPEKL
PPATELLDLQPLPVTALRNPAYEALYQQFKHFNPVQTQVFTILYNSDDNVLVAAPTGSGK
TICAEFAILRNHQKGPDNVMRAVYIAPIEALAKERYQDWKKKFGEGLGIRVVELTGETAT
DLKLLDKGQIIISTPEKWDALSRRWKQRKHIQQVSVFIVDELHLIGGQGGPILEVIVSRM
RSIASQVENKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPSVRPVPLEIHIQGIDIAN
YEARMQAMTKPTYTAIVQHAKNGKPAIIFAPTRKHARLTAVDLMTYSSVDNEEKPLFLLG
SAEEMEPFVANIKEPMLKETIKFGVGYLHEGLSSTDQDIVKTLFETGWIQVCVMGSSMCW
GVPLSAHLVVVMGTQYYDGRENAHSDYPVTDLLQMMGHASRPLIDNSGKCVILCHAPRKE
YYKKFLFEAFPVESHLHHYMHDNINAEVVAGVIQNKQDAVDYLTWTLMYRRLTQNPNYYN
LQGVSHRHLSDHLSELVESTLSDLEASKCVAVEEDILLSPLNLGLISSYYYISYTTIERF
SSSLTSKTKLKGLLDILASASEYELIPIRPGEEELIRRLIHHQRFSFENPKFTDPNVKAN
ALLQAHFSRQTIGGTLASDQQEVVINASRLLQAMVDVISSSGWLNLALLAMEVSQMVTQG
MWERDXMLLQLPHFTKDXAKRCMENPWKKVETIADLVKMDDDERREXLQMSDSQXWICSM
CNRLPDXDLTYDVTNEDNVRAGEDISVHVSLERDLQGRTEVGPVNAPRYPKSKEEGWWLV
VGDTKTNQLLAIKRVALQRKSKVKLEFTAPTEPGERTYQLYFMSDSYLGYDLEEVFTVDV
KEAANPEDGN
NT seq
6513 nt
NT seq
+upstream
nt +downstream
nt
atggctcacccaggtggtggtgccgaagcccatgctcgattcaagcagtacgagtataga
gctaactcgagtctcgttcttacaaccgattctcgcccccgtgacacccatgagcctacg
ggggagcccgaaactttgtgggggaagatcgacccaaaatctttcggcgaccgtgctttt
agggataaaccccccgaattggaggagaaacttaagaaatctaagaagaagaaggagagg
gagcctgcccttgatgctgctcaacctaggagcaaaaagaggcgtcttcaggaggagagt
gtgctcacttcgtcggaggaaggtgtttaccagcccaagactaaagaaacgagggctgct
tatgaggccatgctcagtgttattcagcagcagttgggtgggcagcctttgaatattgtt
agtggcgctgctgacgagattttggctgttctcaagaatgataacttgaagaatcctgat
aagaagaaggaaatagagaagttgttgaacccaatttccgtctctacttttgatgagctt
gtaaaaatcgggaggctcgttaccgattatcacgatgctagtgatgctggtgatgctgct
gtcaatggagatgacggtcttgatgatgatgtaggtgttgctgttgagtttgaagagaat
gaagaggaggaggaagagagcgatctggatatggtacctgaggacgaagaggatgatgat
gatgtggcggaagtagatggctctggtgctatgcagatgggtgggattgacgatgatgag
gagcaggaagctaatgaagggatgaccttgaatgtgcaggacattgatgcatattggctt
cagaggaagatctcacaggcttatgaccagaatattgatccccaacagagtcagaagctt
gctgaagaggttctcaaaattcttgctgaaggtgatgaccgtgaagttgagaataagttg
ttggtgcatctgcagtttgaaaattttaatcttatcaagtacttgttgcggaaccggttg
aaggtagtatggtgtacccggctggcaagggctgaagaccaagaaaagaggaaggagatt
gaagaggaaatgaagggattaggaccaaatcatgttgcgatcctggatcaattgaatgcc
actcgagcgactgctaaagagaggcaaaaagacgtggagaaaagaattagggaggaggct
cggcggctcaaggacgatggaggagatggtgtcagggaccgtcacgagcgagttgataga
gatgcggatggtggttggttaaaagggcagcgccaacttctcgatctagataaccttgcc
tttaatcaaggtggcttgctgatggcaaacaagaagtgcgagcttcctgtgggatcttat
cgaaatcataggaagggttatgaagaagttcatgtgccagctttgaagccaatgccttta
gctgctggcgaaaaactcgtgaagatctctgatattcctgattgggcacaaccagctttt
aaaggaatgagccagttgaacagggtccagagtagagtttacgagactgctctattcagt
gcagaaaatatcttgctttgtgctcccactggggctgggaaaacaaatgttgctatgctc
accatacttcagcagattgcattgaacatgaatgatgacgggtctatcaatcatagcaat
tataagattgtgtatgttgcacctatgaaggcattggtcgctgaggtagtaggtaatctg
tcaaatcgtctggagcaatatggtgtcgttgttagagagctgagtggagaccaatcattg
actcgtcagcagattgaagaaactcagattattgtgactactcctgagaagtgggacatt
attaccagaaaatcaggtgaccgcacatatacacagcttgtaaaacttctcattatcgat
gagatccatcttctgcatgacaatagaggccctgtgcttgaaagtattatagcaagaact
gttcggcagattgaaactacaaaagagcacattcggctggtgggattatctgctacgctt
ccaaactacgacgatgtggcagtttttttaagagttaaactagagaaagggctatttcat
tttgataatagttacaggcctgttcctttggcccaacagtatattgggattactgtaaag
aagccattacagagatttcagttgatgaatgatgtgtgttatgagaaggtggttggtgtt
gcaggaaagcatcaagtactgatctttgtgcactcgaggaaggaaacatccaaaacagct
cgtgcaatccgtgatactgcccttgaaaaagacactcttggtaaattcttgaaggaggat
agtgcaagtcgtgaaattcttcagtctcacacggagttggtaaagagcaatgatctcaaa
gacctattgccatttggtttcgcaattcatcatgcggggatggttagagcagatagacaa
attgtcgaggagctttttgcagatgggcacgtgcaagtcttggtttctactgcaactcta
gcatggggtgtcaatttgcctgctcatactgttattatcaaaggcactcaaatctataat
cccgagaaaggagcatggactgagttaagtcctctagacgtcatgcagatgcttggtcgt
gctggaaggccgcagtatgacacttatggtgaaggaattatcataactgggcacagtgaa
ttgcaatattatctgtccttaatgaatcagcagcttccaattgaaagtcagtttatttct
aaattggctgatcagttgaatgcagaaattgttcttggaactgtacaaaatgctaaagaa
gcatgcaaatggctcttgtatacttacctttttgttcgcatgatgcggaaccccaccctc
tatggtttggctgctgatgcactgaaaagagatggaagcttggaggaaagaagagccgat
ctgattcattcagcagctacggtgttggataagaataacctggtgaagtatgaccggaaa
agcggatatttccaggtgactgacttgggtcgcattgctagttattactatataactcat
gggacagtttcaacattcaatgagcatttaaagccgacgatgggtgatatcgaactttgt
cgtctgttctcccttagtgaagagttcaaatacgtaacggtgagacaggatgagaaggtg
gaactagccaagctgttggatcgggtccctataccaatcaaagagagtctcgaggaacct
agtgccaaaatcaatgttttacttcaagcttatatttcacaattgaaacttgaaggactg
tcattgacatctgacatggtttacatcactcagagtgctgggcgtttaatgagagctctg
tttgagatagtacttaaaaggggatgggcccaattagctgagaaggctttgaaactatgc
aaaatgataggcaggaggatgtggagtgttcagacaccactacgtcagttccatggaagt
ccaaatgaaattttaatgaaaattgaaaagaaagatctggcctgggaaaggtattatgac
ctcacttctcaggagattggggaactaattcgttttcctaagatgggaagaacacttcat
aaatttatccatcagttcccaaagctgaacctgaatgcacatgttcaaccaattactcgc
tctgttttgagggttgaactaaccattacgcctgacttccagtgggatgacaaagtccac
gggtacgtggagcctttttggatcttagttgaggataatgatggggaaaatattcttcat
catgaatatttcatgttgaagaaacaatacattgacgaggaccacaccttgaattttact
gttcccatattcgaacccctgccccctcagtacttcattaatgttgtgtctgatagatgg
ctaggcgcacagagtgttcttcctatttctttcaggcacctaatcttgcctgaaaagctt
cctcctgcaacggagttgctagatttgcagccccttcctgtgacagccttgaggaaccca
gcatatgaagccctttatcagcaattcaagcatttcaatcccgtccagacccaggttttc
accatcttatataactcagatgacaatgtcttggttgctgcaccaactggaagtgggaag
accatatgcgctgagtttgccattttaagaaatcatcaaaagggacctgataatgtcatg
agagctgtctacattgcgcctattgaagctcttgcgaaggaacgatatcaggattggaag
aagaaatttggggagggcctcgggattagggtggttgagttaactggagagactgcaaca
gacttgaaacttcttgataaaggtcagataataatcagcactcctgagaaatgggatgct
ttatcacgcagatggaaacagcggaagcatatccagcaagttagtgtcttcattgttgat
gaactccatttgattgggggtcaaggtggtcctatcctggaggttattgtatctaggatg
aggtccattgctagtcaagtggaaaacaaaattcgtattgtggctctgtctacttctctt
gcgaatgccaaggacttgggtgaatggattggggctacgtctcatggtcttttcaatttt
cctcctagtgtaaggcctgtgcctctggaaattcatatacagggtattgacattgctaat
tatgaagctagaatgcaagccatgacaaagcctacatacactgctattgtgcagcatgct
aagaatggaaaacctgcaattatttttgctcctacaaggaagcatgcccgtctcactgct
gtggacctgatgacatactcaagcgttgacaatgaagaaaagcctttgttcttattaggg
tctgctgaagagatggagccttttgttgccaacattaaggaacctatgttgaaggaaact
attaaatttggtgtaggttatttgcatgagggcctaagcagcacagaccaggatatagtt
aagacactgtttgaaacaggatggattcaagtttgcgttatgggtagttcaatgtgctgg
ggagtcccactgtctgcacatctggtagtggttatgggaactcagtattatgatggcaga
gaaaacgctcacagtgattatccagtcactgatttattgcagatgatgggtcatgctagt
cgacctctcatagacaactcaggaaaatgtgttatcctctgtcacgcgccacgtaaggaa
tattataagaagtttctgtttgaagccttcccagtggaaagccatttgcatcattatatg
cacgataatatcaatgctgaggtggttgctggggttattcagaacaagcaggatgcggtg
gattatctgacttggacgcttatgtacagaaggctgactcagaatccaaactattacaat
cttcagggcgtgagtcacaggcatctttcggatcatctctcagagcttgtggaaagcaca
ctaagcgatctagaagcaagtaaatgtgttgccgttgaggaagatattttgctgtcacct
ttgaatcttggcctgatttcttcttattactacatcagttacactacaatcgagcgcttc
agttcttctctgacatctaaaacgaagttgaagggactcttggatattttggcttcagct
tcagagtatgagctgattccaataagacccggtgaagaagagttgatacgaaggttgatc
catcaccagcgtttctccttcgagaacccgaagttcacagatccaaatgtgaaggcaaat
gctctgttgcaagctcacttctctaggcaaacaattggtggtacccttgcctctgaccag
caagaggtggttataaatgcaagcaggctgcttcaggctatggttgatgttatttccagt
agtggctggcttaatctggcccttttggccatggaagtaagtcaaatggtaactcaagga
atgtgggagcgtgatntcatgctcctccaacttcctcacttcacaaaggatntggcgaag
aggtgcatggaaaatccctggaagaaagtcgagacaattgctgatttggtcaaaatggac
gacgatgaaaggcgagagnctctgcaaatgtctgactcacagtgatggatatgctcgatg
tgtaatcgtttgccggatnatgatttgacatatgatgtgactaacgaggataatgttagg
gctggggaagacattagtgtgcatgtcagtcttgaacgagatcttcaaggaaggacagag
gtaggacccgtgaatgcccctaggtatcctaagtcgaaagaagagggatggtggctcgtt
gttggtgatactaaaaccaatcagcttcttgctattaaaagggttgccctccaaaggaag
tccaaagtgaaactcgagtttactgcccccacagaacctggagaaagaacttatcaactt
tattttatgagtgattcttatcttggctatgatctggaggaggtcttcacagttgatgtc
aaggaggctgcaaatcccgaagatggtaattaa
DBGET
integrated database retrieval system
