Erythranthe guttata (spotted monkey flower): 105954226
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Entry
105954226 CDS
T07346
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105954226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105954226
03012 Translation factors [BR:
egt03012
]
105954226
Enzymes [BR:
egt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105954226
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105954226
Translation factors [BR:
egt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105954226
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
dsrm
DEAD
HA2_N
nSTAND3
AAA_22
AAA_19
ATPase
NACHT
AAA_11
PhoH
T2SSE
Motif
Other DBs
NCBI-GeneID:
105954226
NCBI-ProteinID:
XP_012833354
UniProt:
A0A022RLW7
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MTWASCQYPLSARAPHETWLRSSLLCLCSIDKPNNPRRRRRRETPPRSAASELTRPDQPT
PCERIFTRCMSNLHLQFSPYIISFSKTLKPHPPTQPPPPRRLLFRMKDRPRTPYEGVYVP
PHNRLRSVITTASAAIDSKHTSVTTLTEAENRSSFTTPTVNSNCKSNSVNSYPYLPQQKE
ISRPEEVAQQGFDPEFKFSAQHGEASSDNIIEWKWKLNTLLHSRDNQEIVSREKKDRRDF
AQIAALASKMGLYSHLYVKVVVVSKVPLPNYRFDLDDKRPQREVILPPSLQKRVDAYLVE
YISGKHKSMDVFSRTSSNASIATEESLFEQPETLPQNNAVLEKILCTRSLQMRNEKHTWQ
ESPEGRKMMDFRSRLPAYKEKDAILSAISRNQVVIISGETGCGKTTQIPQFILDSEIDSM
HGAMCNIICTQPRRISAISVSERIATERGEKLGETVGYKVRLEGMKGRDTHLLFCTTGIL
LRRLLVDRNLKGVTHIIVDEIHERGINEDFLLIVLKDLLPRRPELRLILMSATLDADLFS
SYFGGVPMVQIPGFTYPVRTHFLESILEATGYQLTPYNQIDDYGVEKTWKMSKQGPKKRK
SQIATAVEETLNAADFNDYSVRTRESLSYWNPDCLGFNLIEYLLYNICENEKPGAVLVFM
TGWDDITSLKDKLQAHHVLGDANRVLLLACHGSMGSAEQKLIFDNPGYGIRKIVLATNIA
ETSITIDDVVFVIDCGKAKETSYDALNNTPCLLPSWISKVSAKQRRGRAGRVQPGECYHL
YPRCVYDGFADYQLPEILRTPLQSLCLQIKSLNLGGISEFLSRALQSPECLAVQNATEYL
KIIGALDENENLTVLGRYLTMLPMEPKLGKMLLLGVIFNCLDPILSVVAGLSVRDPFLAP
YDKKDLAEAAKARFSLDCSDHLALVRAYEGWKVADRDLSAYEYCWQNFLSVQSMKAIDSL
RKEFYSLLKDTGLVDINPATYSVWSYDEHLVRSIICYGLYPGICSVVHNEKSFSLKTMED
GIVLLYSNSVNARHPRIPYPWLAFNEKIKVNSVFLRDSTAVSDSMLLLFGGSITKGEMDG
HLKMLGGYLEFYMDPTTAELYQSLRRELDELIQVKLLNPTMGIHSYHALMSAIRLLISED
RSAGKFVFNRQLLDPSKQPIIAQESTLIQNRESGPGGDNAKGQLQTLLTRAGYALPSYKT
KQLTNKQFQTSLELNGMLITGQPCSNKKQAEKEAAAAALQWLLGAHGAGAAVAGPDYIDQ
MSLLLKKSKKDHT
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgggcgtcgtgtcagtatccattatctgcacgtgcgcctcacgagacttggctc
cgatcatctcttttgtgcctctgttccatagataaacccaacaacccccgccgccgccgc
cgccgtgaaacccccccccgctcagcagcatccgaattgacccgacccgatcaaccaaca
ccgtgcgagcgtatattcacgcgttgcatgagcaacctacatctccaattctccccatac
attatttctttctccaaaaccctaaaacctcatcccccaacccaaccgccgccgccgcgc
cgcctgctcttcagaatgaaagaccgcccccgtacaccgtacgaaggggtctacgtacct
ccccacaaccgcctccgctctgtaatcaccactgcctccgccgccatagattccaagcat
acaagtgtaaccactctcactgaagctgaaaaccggagctcgtttaccactccaaccgtc
aatagcaactgtaagagtaattcagttaattcgtatccttacttgccgcagcaaaaggaa
atttcgcggcctgaggaggtggcccagcaaggcttcgaccctgaattcaagttttcggcg
caacatggtgaagcttcttcagataatattattgaatggaaatggaagttaaatacactt
ttgcacagtagggataatcaagagatagtatcaagagagaaaaaggatagacgtgatttt
gcgcaaatagcagctttagcaagcaaaatgggtttatacagccacctatatgtgaaggta
gttgttgtcagtaaagttccattgcccaactatcgtttcgatcttgatgacaagcgtcct
cagagggaggtgatcttgcctcccagtttgcaaaagcgtgtggatgcttatcttgtggaa
tacatttctggaaagcataagagcatggatgtgttttcaagaacaagcagtaatgccagt
attgccaccgaagagagcttgtttgagcaaccggagacacttccacaaaataatgctgtc
ctggagaaaattttgtgcacaagaagtttgcaaatgcgtaatgagaaacacacttggcag
gaatcccccgaaggaagaaagatgatggacttccgtagtagactccccgcttataaggag
aaagatgctatattaagtgccatttcacggaaccaggttgtcatcatctctggtgaaact
ggttgcgggaagacaactcagattccccaatttattttggactctgagatagattctatg
catggggcgatgtgcaatattatatgtactcagcccagaagaatatctgccatatctgta
tctgagaggattgccacagagaggggggagaagctgggggaaacagttggatataaagtt
cggctagaaggtatgaaaggaagggatacccacctactcttttgcacaactggcatcctc
ttacgcagactattagttgatagaaacttaaagggtgtaacacatattatcgtggatgaa
attcacgaacgtgggataaatgaagactttctgttgattgtgctgaaagatcttcttccc
cgtcgaccagaattaaggcttattttgatgagtgcaaccttagatgcagatctcttctca
tcatactttggtggggttccaatggtccaaattcctggttttacttatccggtacggact
catttcttagaaagtattttggaggcaacaggataccagttgaccccttacaatcaaata
gatgattacggtgtggagaagacgtggaagatgagcaaacaaggaccaaaaaagagaaag
agtcaaattgctactgcagtagaggagacacttaatgctgctgacttcaatgactactct
gttcggacaagggagtctttgtcttactggaatcctgattgtcttggtttcaacctcata
gaatatcttctatacaatatatgtgaaaatgaaaagcctggtgctgttttagtttttatg
actgggtgggatgacataacatctctgaaagataagcttcaagctcatcatgtactaggt
gatgcaaatcgggttttattattggcatgccatggctcaatggggagtgcagaacagaaa
ttgatttttgacaatcctggatatgggataaggaagattgttctagctacaaacattgct
gaaaccagcatcactattgacgacgtagtttttgttattgactgcgggaaggcaaaggag
acatcatatgatgcgttaaataacactccttgtttgcttccgtcctggatctcaaaggtt
tcagctaagcaaagaagaggaagagctggacgtgttcagccaggagaatgctaccatctt
tatccaagatgcgtatatgatggttttgcagattatcaattacctgaaattctgagaact
cctctacagtccctctgtttgcagatcaagagtttaaaccttgggggaatctctgagttc
ttatcgagggcacttcaatcaccagagtgtctcgcggttcaaaatgctaccgagtatcta
aagataattggggctttagatgagaatgagaacctgactgttttagggcgctacttgaca
atgctgcccatggagccgaaacttgggaaaatgcttttacttggtgtcatatttaattgc
ttggacccaatattaagtgttgttgctggtctaagtgtccgtgatccctttttagctcca
tatgacaagaaggacctagcagaagcggcaaaggcacggttttcactagattgcagtgac
catcttgctcttgttcgggcttatgaaggctggaaagttgctgatagagatctatccgca
tatgaatattgctggcaaaatttcctgtctgtacagtctatgaaagctattgattctctt
cgtaaggagttctactctttgctaaaagatacaggtctagtcgatatcaacccagccact
tacagtgtctggagctatgatgagcatctcgtgcgttcaattatttgttatggcttgtat
cctggaatttgttctgttgtgcacaatgaaaaatccttttccctgaaaacaatggaagat
ggaattgtgcttctatactctaactcagtgaacgcacgccacccaagaataccatatcca
tggctcgcttttaacgaaaaaatcaaagtaaactctgtctttttgcgggattcaaccgct
gtgtctgattcaatgctgctcctatttggtggaagcatcacgaaaggggagatggatgga
cacctaaaaatgttgggtggatacttggagttttatatggatccgacaacagctgaattg
taccagagtttgaggagagagcttgatgaattaattcaagtcaaactcctaaatcccacg
atgggcatacactcttaccacgcgcttatgtcagcaatacgtctgctaatctcagaagat
cggtctgctggcaaatttgtgttcaaccgtcagttactagacccttccaaacaaccaatc
attgcacaagaatcaaccctgatacagaaccgggaaagtgggccaggaggtgataacgcc
aagggccagctacagacattactaactcgagcaggctatgctctacccagctacaagacc
aagcagcttacaaacaaacagttccaaacaagtctggaattaaacggcatgctgataacg
gggcagccatgcagcaacaagaagcaagcagaaaaagaagcagcagctgccgctctgcag
tggctgctcggtgcacacggagctggagctgctgtagctggtcctgattatattgaccaa
atgtccttattgctcaagaaaagcaagaaagatcacacatga
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integrated database retrieval system
