Erythranthe guttata (spotted monkey flower): 105954969
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Entry
105954969 CDS
T07346
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105954969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egt04131
]
105954969
Membrane trafficking [BR:
egt04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
105954969
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
zf-HC5HC2H
DUF2576
Motif
Other DBs
NCBI-GeneID:
105954969
NCBI-ProteinID:
XP_012834111
UniProt:
A0A022RMG2
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MVHSAYDSFQLVTNSTARIDAVESYGSALLLSCSDGSLRIYAPESSPSDHRSPPPPSEFH
SQALELKKEPYVLERTINGFSRKPILAMEVLKSRELLLSLSESIAFHRLPSFETFAVITK
AKGANAYSWDERRGYLCFARQKRVCIFRHDGGRGFVEVKEFSVPDTVKSMSWCGENICVG
IRREYVVLNSTNGALSEVFPSGRIAPPLVVSLPSGELLLGKDNIGVFVDQNGKLLQEGRI
CWSEAPTAVLVEQPYAVGLLPRHVEIRSLRDPYPLIQTVVLRNVRRLLQSTNVIVVALEN
SVYCLFPVPLGAQIVQLTASGNFDEALALCKLLPPEDSNLQAAKEQSIHVRYAHHLFENG
SFEDAMEHFLASQVEISYVLSLYPSIVLPKSSFIPEPEKYLDMSGDAPELSRGSSGMSDD
MESSLPPYALDSEESTDLESRKMSHNTLMALIKFLQRKRYGIVEKAAAEGTEEAVSDAVG
NNFVSYGNNRPKKSGKGRANIPISSVARDTAAILDTALLQSLLLTGQPSAALELLKGLNY
CDLRICEEFLRERNQYVCLLELYKCNSMHREALELLHKLSEESNSSNPPAGLIQKFKPEM
IIDYLKPLCGTDPMLVLEFSMLVLESCPEQTIELFLSGNIPADLVNSYLKQHAPNMQTTY
LELMLAMNENSISGNLQNEMVQIYLSEVLDWYTDLNSQQKWDEKTYSSTRKKLLSALESI
SGYNPDVLLKRLPTDALYEERAILLGKMNQHELALSIYIHKLNVPELALSYCDRVYDSGP
QHSAKSYGNIYLTLLQIYLNPGKTTKNFEKRITNLISTQSPAVTKFGPGSGKTKIRLSKK
IAEIEGAVETRISQSGTDSGKSDGDNDDTIEEGSSTIMLDKVLDLLGKRWDRINGAQALR
LLPRETKLKNLIPFLGPLLRKSSEAHRNFSVIKSLRESENLQVKDELYSLRKNVVKISGD
SMCSLCNKKIGASVFAVYPNGKTIVHFVCFKDSQNMKAVGKGSSLRKR
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacagcgcctacgattccttccagctcgtcactaattccaccgccagaatcgac
gccgtcgaatcgtacggctccgccctcctcctctcctgctccgatggctccctccgaatc
tacgctcccgaatcatccccctccgaccaccgatctccccctccgccgtctgaattccat
tcccaagccctagagctgaagaaggagccctacgttctcgagcggacaatcaatggcttc
tccagaaagccgattctcgcgatggaggttctcaagtctagagagctcctcctctcgcta
tcggagtcgatcgcatttcataggctgccgagtttcgagactttcgccgtgattaccaaa
gctaaaggtgcgaatgcctactcctgggatgagaggcgagggtatctgtgcttcgcgcgg
cagaagagggtttgcatcttcaggcacgatgggggacgggggtttgtggaagtgaaagaa
tttagtgttccagacacagtcaaatcaatgtcatggtgtggtgaaaatatatgtgtggga
atccgaagagagtatgtagtgttgaattcgaccaatggtgcattatcagaggtgttcccg
tcggggaggattgctccgcctttagttgtgtctcttccatcaggagagcttcttcttggg
aaggataatattggagtgtttgtcgaccagaatgggaaactacttcaggaaggcaggatt
tgctggtcagaggctcctacagcagttctagttgagcagccgtatgcagtaggtctctta
ccaagacacgttgagatacgatctcttcgtgatccttatccactgatccagacagttgtt
cttcgcaatgttcgccgacttcttcaaagcacgaatgttatagttgtagctctagagaac
tctgtttactgcttgtttccagttcctcttggtgcacagattgtacagctgacagcatca
ggcaatttcgatgaagcgctggctttatgcaagttacttcctccagaagattcaaacctt
caagctgcaaaggagcagtcgatacatgttagatacgctcaccatttgttcgaaaatggg
agctttgaggatgctatggaacattttttggcatctcaagtggaaatcagttacgtgctt
tctttgtatccatctatagttcttcccaaatcatcttttattcccgaaccagagaaatat
ttggatatgagtggtgatgctccagaactctcaagaggttcatccggcatgtcggatgat
atggaatcttcacttcctccttatgcattggattctgaggaaagtacggacctcgaatcc
aggaaaatgagccacaacactctgatggctctcattaagttcttgcagaggaaaagatat
ggtattgttgaaaaggctgctgcagagggaactgaggaggctgtttcagatgccgtagga
aataattttgtttcttatgggaacaatcggccaaagaaatcgggcaagggtcgagccaat
attcctatcagctcagttgctagggacactgcagctatactcgacacagcattacttcag
tctcttctattgacaggacaaccttcggctgccctggaactactgaagggtcttaattat
tgcgatctaagaatatgtgaggaatttttgcgggaaaggaatcagtacgtttgtctgctt
gaactttataaatgcaattccatgcatcgtgaagcactcgagcttcttcacaaattatct
gaagagtcaaactcaagcaatccaccagctggactcattcagaagttcaagcccgagatg
attatcgattatcttaaacctctttgtggcacagatccgatgcttgtcctggagttctca
atgcttgttcttgaaagctgtcccgagcaaactattgaactcttcttgtctggaaacatt
ccagccgacctggtcaactcatatctaaaacagcatgctccaaatatgcagactacatat
ttggagcttatgcttgcgatgaatgaaaatagtatctcagggaatctccagaatgaaatg
gtgcaaatatacctgtcggaagttcttgattggtacacagatcttaattctcagcaaaag
tgggatgagaaaacgtattcttcgaccaggaagaaactattgtctgctctggagagcata
tctggctacaaccccgatgttttgttgaagcgtcttccaacagatgcgttgtatgaagaa
cgagcgattttgttgggaaagatgaaccaacacgagcttgctctctccatatacattcac
aagcttaacgtacctgaactggcgctgtcgtattgcgatcgagtatatgattctggacca
cagcattcagcaaaatcttatggcaacatatacctcactctactacaaatatatttgaat
cctggcaagacaaccaaaaacttcgagaagaggatcactaacttgatatccactcagagc
cccgcggttacaaagtttggtccaggaagtggtaaaactaagattcgcctatcgaaaaaa
attgctgaaattgagggagctgtcgagactcggatcagccaaagcggtactgacagtgga
aagagtgacggagataacgacgacaccattgaggaaggatcttctacgattatgctcgat
aaggtccttgatttgttgggcaagagatgggatcgaataaatggagctcaggccttaaga
ctgcttcctcgagaaactaaattgaagaatctaattccatttcttggacctcttttgaga
aaatccagtgaagcacaccgcaacttttcagttataaagagtttgagagagagtgaaaac
ctacaggtgaaagacgaactttatagcctgaggaaaaacgtagtgaagataagtggcgat
agtatgtgctcgctttgcaacaaaaagataggagctagtgtgtttgcagtttaccccaat
gggaagacaattgttcactttgtttgcttcaaagattcacagaatatgaaagctgtgggt
aaaggttcgtcgttaaggaagagatga
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