Erythranthe guttata (spotted monkey flower): 105955239
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Entry
105955239 CDS
T07346
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105955239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egt03041
]
105955239
03009 Ribosome biogenesis [BR:
egt03009
]
105955239
Enzymes [BR:
egt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105955239
Spliceosome [BR:
egt03041
]
Complex A
U2 snRNP components
U2 related factors
105955239
Complex B
105955239
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
105955239
Ribosome biogenesis [BR:
egt03009
]
Eukaryotic type
90S particles
Helicases
105955239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
ResIII
nSTAND3
SRP54
ABC_tran
AAA_30
T2SSE
AAA_7
Flavi_DEAD
UvrD-helicase
SLFN-g3_helicase
PhoH
NACHT
TsaE
AAA_29
Motif
Other DBs
NCBI-GeneID:
105955239
NCBI-ProteinID:
XP_012834407
UniProt:
A0A022S5X8
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MGTERKRKVSLFDVVDDTALQGKMPRANGFGGAALPENVNPWNGKQYSQRYFEILEKRKS
LPVWHQKDEFFQALKANQTLILVGETGSGKTTQIPQFVLEAIKSETMDKGKKFMVGCTQP
RRVAAMSVSRRVAEEMDVAIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLER
YKVIILDEAHERTLATDVLFGLLKEVLRNRPDMKVVVMSATLEAEKFQGYFSGAPLMKVP
GRLHPVEIFYTENPERDYLEAAIKTVYQIHTSEPPGDILVFLTGEEEIEDACRKIGKEIA
KDGDQAGPVKIVPLYSTLPPAMQQKIFEAAPPPAKEGGPAGRKIVISTNIAETSLTIDGI
VYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFHND
LVPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEG
NLTKLGEIMSEFPLDPQMGKMLVVSPEFNCSNEILSISAMLSVPNCFIRPRDAQKAADEA
KARFGHVDGDHLTLLNVYHAYKQNKEDPQWCYDNFVNHRAMKSADNVRQQLARIMARFNL
KLCSTDFSSRDYYVNIRKAMLAGYFMQVAHLEHSGHYLTVKDNQVVHLHPSNCLDHKPEW
VIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLSNFPNCEAKRQLEKLYKKRENSRDE
SRNRK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggggacggagaggaagaggaaggtgagcctgttcgacgtagttgacgatacggcgtta
caggggaagatgcccagggccaatggattcggcggcgcggcacttcccgaaaacgttaat
ccgtggaacggaaagcagtactcccagagatattttgagattttggagaagaggaagtct
ctccccgtgtggcaccagaaagatgagttctttcaggccctcaaagccaatcaaacccta
attcttgtcggtgaaactggaagtggtaaaaccactcagattccccagtttgtcctggag
gctataaagagtgagactatggataagggcaagaagttcatggttggatgcactcagcct
agaagagtggccgcaatgtctgtttcaagaagggttgccgaagagatggatgtggcaatc
ggcgaggaagtaggttatagtattcgttttgaggattgtagcagtgcacgaactgtttta
aagtatttaacggatggtatgcttttgagagaagccatgaccgatccactcttggagaga
tacaaagtgataatacttgatgaggctcatgagagaaccttggcaacagatgttcttttt
gggcttctgaaggaagtgttgagaaacaggcccgacatgaaagtagtcgttatgagtgcc
accctggaggctgaaaagtttcaagggtattttagtggtgcaccactcatgaaagttcct
gggagacttcatcccgttgaaattttctataccgagaatcctgagagggattacctagaa
gctgctataaagactgtttatcagatacatacttctgaacctcctggtgatatactggtt
ttccttactggtgaagaagaaatcgaagatgcgtgtagaaagatagggaaggagatagct
aaggatggggatcaagcaggaccagttaaaatagtacctttgtattccactcttcctcca
gcaatgcaacagaagatttttgaagctgcccccccacctgccaaggagggtggtccagca
ggaaggaagattgttatttcaacaaacattgccgaaacatcattgacaattgacggtata
gtttacgtcatagaccccggatttgcaaaacaaaaggtttataatccacgaattcgtgtc
gagtctttattggtatctcctatttcgaaggctagtgcccaccaacgttcgggacgtgct
ggaagaacgcagcctgggaagtgtttcaggctctacactgaaaagagcttccataacgac
cttgtacctcagacctatccagagatattgcggtcaaaccttgcaaacactgtcttaact
ttgaaaaagcttggaatcgatgatctcgtccattttgatttcatggatccacctgctcca
gagacactgatgagagcgttggaggtcttgaattacttgggagcgcttgatgatgagggg
aacttaaccaagttgggtgaaatcatgagcgagtttcccttggatcctcagatgggcaaa
atgctggttgtcagtccagagtttaattgttccaacgagattctctctatatctgctatg
ctttcagtacccaattgctttatccggcctagggatgctcaaaaagctgccgatgaagca
aaagctcggttcggtcacgttgatggggatcacctcactctactgaatgtataccatgca
tacaaacaaaataaggaagatccacagtggtgctatgataattttgtcaatcatagggca
atgaaatcggcagacaatgtcaggcagcagttagctcggattatggccagattcaatctg
aagctatgcagcacagatttcagtagccgtgattactatgtcaatatcaggaaggctatg
ctagctggatacttcatgcaggttgcccatttagagcacagcggccattatctgaccgta
aaagacaaccaagttgttcacttgcacccttcaaattgcttggaccataagccagagtgg
gtcatctacaatgaatatgtactaacaagcaggaatttcatccgtacagtaacggatatt
cgtggtgaatggttggttgacattgcaccacattactatgacctctcaaatttccccaat
tgtgaggcaaaacgccaactggagaaactgtacaagaagcgggaaaactccagggatgag
agcaggaatcgcaagtga
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integrated database retrieval system
