Erythranthe guttata (spotted monkey flower): 105955263
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Entry
105955263 CDS
T07346
Name
(RefSeq) DNA damage-binding protein 1
KO
K12830
splicing factor 3B subunit 3
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105955263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egt03021
]
105955263
03041 Spliceosome [BR:
egt03041
]
105955263
03036 Chromosome and associated proteins [BR:
egt03036
]
105955263
Transcription machinery [BR:
egt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105955263
Spliceosome [BR:
egt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
105955263
Complex B
105955263
Complex C
U2 SnRNP specific factors
105955263
Chromosome and associated proteins [BR:
egt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
105955263
TFTC complex
105955263
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
105955263
NCBI-ProteinID:
XP_012834434
UniProt:
A0A022RJ37
LinkDB
All DBs
Position
Unknown
AA seq
1383 aa
AA seq
DB search
MAVSEEESSSSSSSRPNTSNTNLRSPNADAFYLAKTVLRGSVVLQAVCGHFRSPNSYDVV
FGKETSIELVIVDEDGVVQSISEQPVFGTIKDIAVLPWNKRFQVQNPKVLGKDMLLVISD
SGKLSFLTFCSEMHRFLPLTHIQLSDPGNSRHQVGRMLAVDSSGCFVAASAYEDQLAIFS
LSMSSSGDIIDKRILCPPEKDGGLETAKGSIINISGTIWSMCFISEDDNQPEKERKPVLA
ILLNRWGSFYRNELLLLEWNIKEQSVQVVYQFAEAGPLAYHIVEVPHTHGFAFLFRAGDI
ALMDFRNVKSPSCVHRTSLNFTPLEEKKFKNSIRIPDIMDEEGMYSVAASALLELGDINK
NDDPMNIDDYSSVQPGSNYVCSWSWEPGVTNGHRIIFSADSGDLYALEVLFESDGVRVNL
SDCLYKGRPANALLWLDCGFVAVVVDMADGMVLKFEEGFLKYKSSIQNIAPILDMCIVDY
PDEKHDQLFACSGMASEGSLRIIRSGISVEKLLKTAPIYQGVTGTWTVKMKLSDPYHSFL
VLSFVEETRVLSVGVNFSDVTESVGFQPDVCTLACGVVADGVMVQIHQRGVRLCLPVGSV
HPEGIPFSSPICTSWFPDNMSISLGAVGHGMIVVATSSPCFLFILGIRCSLAYHYEVYQM
YCVKLQNELSCISIPQKHLELSRFLTNYAANNSTPAFPSGNHVDNLFVIGTHRPSVEVVS
FTGDKGLQVLAIGIISLTNTLGTTISGCVPEDVRLVLVDRLYVLSGLRNGMLLRFEWPSA
STLSSAGSTGQQSIVGSSTINFHISSNLLSPNNEVPEIFKSNISGKTEGDLPVNLQLIAV
RRIGITPVFLVSLSDSLDADMIALSDRPWLLQTARHSLSYTSISFQPSTHVTPVCSVECP
RGILFVAENSLNLVEMVPSKRLNVQAFHLGGTPRKILYHNATRLLFIMRTELDNDSCSSD
ICCVDPLSGSVVSSFKFEPGETGKCMEFIKVGCEHVLVVGTSLSAGPAMMPSGEAESTKG
RLLVLFLEYTHISDIGSVTQRNSPIGGYSADQLFNSSLCSSPDDNNYDGIKLEETEAWHL
RLAYSTIVSGMILAVCQYLDSYFLFSSGSTFSVCGFVNDNCQRMRKFASTRTRFTIMTLT
SHFTRIAVGDCRDGVLFYSYHEDSKKLEQVYCDPVQRLVADCLLMDVDTAVVSDRKGSLV
VLSCANHLEDNASPERNLTLSCSYYMGEIAMSMRKGSFSYKLPADDMLKDSDDATNNINS
SRNCIMASTLLGSIIIFIPMTREEYELLEEVQARLVVDPLTAPILGNDHNEFRSRESRAG
IRKILDGDILGQFLELTSMQQEAVLALPSGTPNVTVMSTLKPPMPVMVNQVVRLLERVHY
ALN
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttcagaagaagaatcttcatcatcgtcttcatcacgcccaaatacatccaac
actaatttgcgatcacctaacgccgatgccttttatttggccaaaacagtcctcagaggc
agcgttgttcttcaagctgtttgcggccacttccgctcccccaattcttacgacgtcgtc
ttcggcaaggagacatcaatagaactcgtgatagttgatgaagatggggttgttcagtct
atttctgaacaacctgtatttggtaccatcaaagatattgcagtccttccatggaataag
aggtttcaggtgcagaatccaaaggtactggggaaggatatgttacttgtcatttctgat
tcaggaaagctttcatttctcaccttttgcagtgaaatgcacaggtttttgccgttgacc
catattcagctttctgatcctggcaactcaaggcatcaagttggaaggatgctagctgtt
gattccagtggttgttttgttgctgctagtgcgtatgaggatcaattggctatcttctcg
ctgtctatgtcctcaagtggtgatatcattgataagagaattttgtgtcctcctgaaaaa
gatgggggtttggaaactgcaaaaggttctattatcaatatttctggtacaatatggagc
atgtgcttcatctctgaagatgacaatcagcctgagaaggagaggaagcctgttcttgcc
attcttctgaatagatggggatctttttatcgaaatgagcttttgttgctggaatggaat
atcaaggaacagtcagtccaagtggtgtatcagtttgcagaagccggacctttagcatat
catatagtagaagtgcctcatactcatggatttgccttcctgttcagggcaggtgatatt
gccctcatggatttcaggaatgtcaaaagcccttcttgtgtccacaggacaagtttaaat
ttcacaccattggaggaaaagaaatttaaaaacagtattagaatacctgatattatggat
gaagaaggtatgtatagcgttgctgcatctgctttgctggagcttggtgacataaataaa
aacgatgatccaatgaatattgatgattatagtagtgtccaacctggttccaattatgtc
tgctcatggagttgggaacctggtgtaacaaatggtcataggatcatatttagtgctgac
tctggagatctttatgctcttgaagtcctttttgagtctgatggcgttagagtaaattta
tctgattgtctttacaaaggtcgaccagccaatgctctgttatggcttgactgtgggttt
gtagcagtcgttgttgacatggcagatgggatggtcttaaaatttgaagaggggtttcta
aaatacaaaagttcgattcaaaacattgcaccaatcttagatatgtgcattgttgattat
cctgatgagaaacacgatcaactgtttgcctgctctgggatggcatctgagggatctctg
cggatcatccgaagtggtatcagtgtggagaaattgttgaaaactgctccaatttatcag
ggtgtcactggtacatggacagtcaaaatgaaactttccgacccttatcattcttttctt
gtactatcatttgttgaggagaccagggttctttcagtcggtgtcaacttttctgatgta
actgaatctgttggttttcagccagatgtctgcactttggcttgtggtgttgtagctgat
ggtgtgatggtccagattcaccaacgtggagtgagactttgtttgcccgttggaagtgtg
catcccgaaggtattcctttctcatctccaatatgcacatcgtggttccctgataatatg
agtataagtctcggagctgttgggcacggcatgatagtggtagccacatccagtccatgt
ttcctattcattcttggtattcgatgttcattggcgtatcattacgaagtttatcagatg
tactgtgtaaaattgcagaatgagttatcttgtatctccatacctcagaagcaccttgag
ctgagtagatttttgacaaattatgcagctaacaactctacgccagcctttccatctgga
aatcatgttgataatttgttcgttattggtactcataggccttcagtagaagtcgtatcc
tttacaggtgataagggactacaagttcttgccatagggatcatctcattaacgaacaca
ctggggactactattagtggatgtgttccagaagatgtaaggcttgtcttagttgatcgc
ctgtatgttctttcaggattgaggaatggaatgctacttaggtttgagtggcctagtgcc
tctacactttcctcagcagggtcaaccggtcagcaatctattgttgggtcctccacaatc
aatttccatatctcgtcgaatttattgtctccgaataacgaagtcccggaaatattcaag
tccaatatatctgggaagactgaaggagatttgccagttaatcttcagctgattgctgta
cgccgaattggtattacacctgttttcttggtttcgttgagtgattcccttgatgctgat
atgattgccctcagtgataggccttggttattgcagactgcaaggcacagtctttcttat
acatccatctccttccaaccttctactcatgtcactcctgtgtgttcagttgaatgcccc
agaggaattttatttgttgcagagaacagtcttaatttggtggaaatggtgcctagtaaa
aggcttaatgtgcaggcatttcatcttggaggcactccgaggaaaattttatatcataat
gctaccaggttgttgttcattatgaggacagaattagataatgattcatgctcatcagat
atttgctgtgtggatcctttgagcggctcagtggtatcatctttcaaatttgaacctggg
gagactggaaaatgcatggagttcataaaggtcggatgtgagcatgtgctggttgttgga
actagcctttctgctggaccagctatgatgccaagtggtgaagctgaaagtacaaaaggc
cgtctgcttgttctcttccttgaatacacgcatatttcagacattggttctgtaacacaa
cgaaattcacctatcgggggctattctgctgatcagctctttaacagtagcctctgtagc
agcccggatgataataactacgatggaattaaacttgaagaaactgaagcatggcacttg
cgcttggcttactcaaccatcgtgagcggcatgatacttgccgtgtgccagtaccttgat
agttatttcttgttttcttctggttctactttttctgtttgtggttttgtgaatgataat
tgtcaaaggatgaggaaatttgcttccacaagaactcggtttactattatgactttgact
tcacatttcactagaatagctgttggggattgtcgtgacggtgttctcttctattcttac
catgaggattccaaaaaactagagcaagtttattgtgatcctgtccagaggctagttgct
gattgccttcttatggatgttgatactgccgttgtttcggacaggaaaggaagtttggtt
gtcttatcatgcgcaaatcatttagaagacaatgcgagtccggagcgcaacttgactcta
agctgttcatactatatgggtgagattgccatgagcatgaggaagggttcattctcatac
aaactcccagcagatgatatgttgaaggactccgatgatgctactaacaatattaactca
tcacgaaactgtataatggcatctacgctattagggagtataataatcttcattccgatg
acaagggaggaatacgagctattagaagaggttcaggctaggcttgtggttgacccgctt
actgctccaattctgggaaacgatcacaatgaatttcgaagccgtgaaagtcgggctgga
atacgtaagatactggatggtgacattttgggtcaattcttggagcttacaagcatgcag
caagaggcggtgttggcattacctagtggcacaccaaatgtaacagttatgtcgaccttg
aaacctcctatgccagttatggttaatcaggttgttcgactgcttgaacgtgtacattat
gcccttaactaa
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integrated database retrieval system
