Erythranthe guttata (spotted monkey flower): 105955348
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Entry
105955348 CDS
T07346
Name
(RefSeq) endoribonuclease Dicer homolog 2
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egt03036
]
105955348
Chromosome and associated proteins [BR:
egt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105955348
microRNA pathway
RISC loading complex
105955348
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
Helicase_C
PAZ
DEAD
ResIII
Cas3-like_C_2
Dicer_PBD
Helicase_C_2
dsrm
Motif
Other DBs
NCBI-GeneID:
105955348
NCBI-ProteinID:
XP_012834518
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All DBs
Position
Unknown
AA seq
1302 aa
AA seq
DB search
MFIHSGVDSQPLFFLGNTKFNLIKKNQERRNQMGTNNTSTNGESQHVVADPVSFARSYQL
EALEKALKQNTIVFFETGTGKTLIAIMLLRSYAHLLRKPSPYVAVFLVPTVVLVTQQGEV
VSAHTDLNVGMYYGELGVDFWDAAMWKKQKEDTRCLSLEENLQQLLEKHKLILRGPNISE
SVAKSAKKKLKMLLSTFMFCLTELGVWLAMKASELYSRQEDDIFMWDKMDISGERVVQAF
SLDAVKVFSAFMPSDPQWSVCNDLAASMKSGYLTSKVICLVETLLEYRETEALRCIVFVE
RIVTSIVIRSLLNELLPLYINWKTEYTAGNNSRLQSQSRKEQNAIIEEFRKGTVNIIIAT
SMLEEGLDVQSCNLVIRFDPSATVCSFIQSRGRARMPNSDFILMVKRDDPSAIARVKNYI
DSGSTMRQECLTHSDIPCEPLGNTMHGEPWYQVESTGAIVTLRSSVALLYFYCSRLPSDS
YYKPYPYFSPDEELGICTLHLPNSCPIKTINVEGNTKLLKQLACLEACKKLHQVGALTDN
LVPDMVEEERDAKELGSEPYIDEHAKYFPPELIGSCRKESKTHYHCYLIELKANFQYDVQ
LQEVVLAVHERLDDDIEKVNLDLDVDRGKIIVGIKHIGYISLDSEQVALCRRFQITLFRL
LLDHKLDKLYEEDNQSSEKIDSSIFNYLLLPTIGSPHNTSIDWKCITSVTYPENSSKDEH
NNCSRNGGNGPRMHTKNGSACRCMLDNSLVCTPHNGVVYCVNGSLDGFNGNTYLELKDGE
SITYKNYYKRTHGIDLQFERQTLLNAKRIFTVHNFLQRCRISSAKESRNTTYELPPELCL
IIMSPISISTFYSFSFLPSIMHRIESMLLASSLKSMPLDHCPQNVVIPTLTVLEAITTKK
CQENIHLESLETLGDSFLKYAVSQQLFKTHQNRHEGLLSLKREKLIRNTTLCKLGCDRKI
TGFIRNEPFDPKTWIIPGTNHTLQNELFSSTKKIYINGSRKIKGKTVADVAEALIGAFLS
AGGEIPALSFIAWLGIDVDFVSIPYTRGLFLKPELHVNIGHLESILNYSFKDVSLLVEAL
THGSYMRPEIPGCYQRLEFLGDAVLDYIITVHLYQENPSLSPGLLTDLRSASVNNDCYAN
SAVKAGLHKHILHLSPELHRHINTALSNFDEINSKSTFGWESETTYPKVLGDVIESLAGA
IFVDSGHNKEIVFQSLRPLLEPLVTLETLRLHPVRELNELCQREHFNFQKLVTKLNGLVY
ATIEVEARGVVHKETRSAADKDTAKRLACKDVLKSLKEGVFA
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgttcatacactctggagttgattcacagccattattttttttagggaatactaaattt
aatttaattaaaaaaaatcaagaaaggagaaatcaaatggggacgaataatacgagcacg
aatggagaaagccagcacgttgttgccgatcccgtctcctttgcaagaagttatcagctc
gaagcactggagaaagcactgaaacagaatacgattgttttcttcgaaaccggcaccgga
aaaaccctaatagcaataatgcttcttcgaagctacgctcacttacttagaaagccgtcg
ccttacgtcgctgtttttttggtccctactgttgttttggttacccaacaaggtgaagtt
gtgtcggcgcacaccgacttgaacgtgggaatgtactacggtgagttgggtgtcgacttt
tgggatgctgccatgtggaagaaacagaaggaagacacgaggtgcttgtccctcgaggaa
aacttgcagcagttgttagaaaagcataaacttattctcagaggaccaaacatttcagaa
tcagtcgccaaatctgcaaagaagaaattaaaaatgctattgtcgactttcatgttttgt
ttgaccgagctcggcgtttggctagctatgaaggcatcggagctttattctcgtcaagaa
gatgacatatttatgtgggataaaatggatatttccggtgaaagagtcgtacaagctttt
agtttagatgcagtaaaggtcttctctgcattcatgccgtctgatccacaatggtcggtt
tgtaatgatttagcagctagcatgaaatctggttatcttacgtcaaaagtcatatgcctc
gttgaaactcttcttgagtacagagaaacggaggctttgaggtgcatagtattcgttgaa
cggattgtgacatcaattgttattcgtagtttgttgaatgaattgctcccgttgtatatt
aattggaaaaccgaatatacagctggcaacaattcaagattgcagtctcagagtcggaaa
gaacaaaatgcaattatcgaagaattccgcaaaggaacggttaacatcatcattgccact
tcaatgctcgaagagggcttagatgtccaaagctgcaatctcgtaattagattcgatcct
tctgccacagtatgtagctttattcagtcacggggtcgtgctcgtatgccaaactctgat
tttatactaatggttaaaagggacgatccttcggccatagcgcgtgtgaagaactatata
gatagtggaagtacaatgaggcaagaatgcttgacccattccgatattccgtgtgaaccg
ctcggtaatacaatgcacggtgagccgtggtatcaagtcgaaagcacgggtgcaatcgta
actttgaggtctagtgtggctttgctttacttttattgctcgaggctcccttccgatagt
tattataaaccttatccatacttttcacccgacgaagagcttgggatttgcacgcttcac
ctcccaaatagctgcccgattaaaacaattaatgtcgagggcaacaccaaattactaaag
caacttgcttgccttgaagcttgtaagaagcttcatcaagttggtgccctaacggataac
ctcgttcccgatatggttgaggaagaaagagatgctaaagaattaggatctgaaccgtac
atagacgagcatgcaaagtatttcccgccagaattgattggctcgtgtagaaaagagtcg
aaaacgcattatcactgctatttaatcgagctaaaagcgaatttccaatacgatgttcag
cttcaagaagttgtgttggctgttcacgaaaggttggacgatgatatcgaaaaagtcaac
cttgacttggacgttgataggggaaagataattgtagggattaaacatattggatacatt
tcattggattccgagcaggtggccctgtgtcggagattccaaattacgctcttcaggctt
cttctcgatcataaactagacaagctttacgaagaagacaatcaatcttccgaaaaaatc
gattcttccatatttaattatcttcttctcccaactataggctcgcctcataacacatca
atcgactggaaatgcattacttctgttacgtaccccgaaaattcttctaaagacgaacac
aataattgttctagaaatgggggtaatggcccccgcatgcatacgaaaaacggctcagcg
tgtcgctgcatgctagataattccttagtgtgtacccctcataatggtgttgtgtactgc
gttaacgggagtttggatggttttaatggtaatacgtatcttgaactcaaagatggagaa
tctattacgtacaaaaactattacaaacggacacatgggatcgatttgcaatttgaacga
caaactcttcttaatgccaaacggatatttaccgtgcataactttctccagagatgtcga
atttccagtgcaaaagaatcaaggaatacgacatatgaactaccacctgagctttgcttg
ataattatgtcgcctatttcaatttctacgttttattcattctcgtttcttccatcgatt
atgcatcgaatcgagtcgatgcttttagcgtcgagcctgaaaagtatgcctttggatcac
tgtcctcaaaatgttgttattccaacactcacagttttggaggcaataacaacaaagaaa
tgccaagagaatattcatttggaatctttggagacacttggagattcttttctcaagtac
gcggttagtcaacaactcttcaaaacgcatcaaaatcggcacgaaggtcttcttagtctt
aaaagagagaaacttattcgcaatactacattgtgcaagcttggatgtgaccgcaaaatt
acgggatttattcgtaacgagccatttgatccgaaaacatggataataccgggtactaat
catacattacaaaacgagctcttttcgtcaacgaaaaaaatctacataaatgggagcagg
aaaattaaaggtaaaaccgtagctgacgtggcagaagcattaatcggtgcatttcttagt
gctggaggtgaaattccggctttgtccttcattgcatggctaggtattgatgttgacttt
gtcagtataccttatacaagaggcttgtttttgaaaccggagttgcatgtaaatatcgga
catttggaatctattttgaactactcgtttaaggatgtttccctattggtcgaggcgctg
actcatggttcttatatgcggcccgaaattccaggatgttatcagcgtctcgagtttctt
ggggatgcggtgctggattatataattacagttcacctctatcaagaaaatcccagccta
tctccgggacttttaaccgatctaaggtctgcatctgtgaacaatgattgttatgccaac
tcagcagttaaggctggtctgcacaaacacatacttcatctttcaccggagcttcaccga
catataaataccgcccttagcaactttgacgagataaattccaaatcaactttcggttgg
gaatccgagacaacttatccaaaggtacttggagacgtaatagaatctctagcgggggcg
atatttgtcgactcgggtcacaataaggagattgtttttcaaagtttgaggccgcttctc
gagccattagtcacactcgaaacactgaggctacatccagtcagagagttgaacgaatta
tgtcaaagggagcattttaatttccagaaactagttactaaattgaacgggctggtatat
gctactatagaggttgaagcgcgtggcgttgtgcataaagaaacgagatctgcggcggac
aaggacacggcaaaaagattggcgtgcaaagacgttttgaagtctctgaaagaaggcgtt
tttgcttga
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