Erythranthe guttata (spotted monkey flower): 105955492
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Entry
105955492 CDS
T07346
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105955492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105955492
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105955492
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
105955492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
105955492
NCBI-ProteinID:
XP_012834676
LinkDB
All DBs
Position
Unknown
AA seq
199 aa
AA seq
DB search
MKERGEAEDFVTPGEVLGKTSELKPGNGAYVSPQDNTVYASLAGIRSLTPPPPESADLRP
TVEVKGHKAHGPVPEPGAIVLARVTKVMAKMASADIVCVGPKSVREKFTGIIRQQDVRAT
EIDKVEMHSSFRPGDIVKALVLSLGDARAYYLSTAKNELGVVSAESAAAGETMVPISWTE
MQCPSTGQIEQRKVAKVGA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaagaggagaagcagaagatttcgtgacaccaggtgaagtattggggaaaacc
tcagagttgaaacctggtaacggcgcgtacgtttcaccccaggataacaccgtctacgcc
tccctcgccggaatccgctccctcactcctcctccacctgaatccgccgacctgaggcct
acggtggaggtgaaaggtcacaaggcgcatggtccggtgccggagcctggtgctattgtc
cttgcaagagttaccaaagtgatggccaaaatggcttcagcagatatagtatgtgttggt
cccaagtccgtacgagaaaaatttaccggcattattaggcagcaagatgtgagagcaaca
gagattgacaaagtagaaatgcactcatctttccgcccgggcgacatcgttaaagcttta
gttctgtcccttggagatgcgcgagcttattatctatcaactgcaaaaaacgaactcggc
gttgtttctgcagaaagtgcagctgcaggtgaaacaatggttccgataagctggacagag
atgcagtgtccttcaacaggtcaaattgagcagaggaaagttgccaaggttggggcttga
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