Erythranthe guttata (spotted monkey flower): 105956182
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Entry
105956182 CDS
T07346
Name
(RefSeq) probable NOT transcription complex subunit VIP2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105956182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105956182
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105956182
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105956182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
105956182
NCBI-ProteinID:
XP_012835473
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MSGILSSGLNGSNSSLPDNTGRAFATSFSAQSGSSGAVLNQSGGNLQGLHNIHGSFNMSN
MPAPYASRNSANLSGIPNTVQQAPGSVSNGRYAINSLPNALSQLSLGSSHGHSGVTNTGG
PGVLPNMGNTGRITNSIGGLVGGGNASRGANSSGVGNIPGLASRLNLTAPQVVSMLGNSY
SGSGVPLSQNQYQAGNNNFSFMALLNDSNAHDNGGFDVNDFPQLSGRPPSAGGSHGQIGL
MQKHNIGFAQQNQEFSIQNEDFPALPGYKAGGLNVGGNAEYTINTHQKEQIHDSMANLIQ
SQQLSMGRSSGFNFGGSYSSHHPQQHRASSINGTGVSYLTSGNQDLHFHGPDQYQQFQQS
QSRFINHPFRDKDMKSTQGSQTVPDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLN
SSDTLHKKFASPWSDEPVRGEPEYVVPECYYDKQRPPLNQGTFARFRPETLLYVFYSMPK
DEAQIFAANELYNRGWFYHREHRLWFTRVANVEPLVKTNSYERGSYICFDPNTWHASRKD
NFVLQYEMVEKRPTLSQQLPL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggatactcagttcaggattgaatggatcaaattcaagccttccagataacact
ggaagagctttcgcaacttccttttctgcccagtctggttcctccggcgctgttttaaat
cagtctggtggaaatcttcaaggacttcataacatccatggtagcttcaacatgtcaaac
atgcctgcaccatatgcatcaagaaattcagcgaatcttagtggtattccaaacactgtc
cagcaagctccagggagcgtgtcaaatgggagatacgcaataaatagtcttccaaatgca
ctttctcagctatctcttggaagttcacatgggcattcaggtgttacaaatactgggggc
ccaggtgttcttcccaatatgggaaatacaggccgaattacaaattctattggtggtctt
gtgggtggaggcaacgcttcaaggggtgctaactctagtggggtgggcaatattcctggc
cttgcttctcgcttgaacttgactgctccacaggtggtctccatgctaggcaattcttat
tctggttctggtgtgccactctcacaaaaccaatatcaagctgggaataataattttagt
tttatggcattattaaatgattcaaatgcccacgataatggtggttttgatgtaaatgac
tttcctcagctatctggccgtcctccttctgccggtggttctcatggtcaaataggttta
atgcaaaagcataacatcggtttcgcccaacagaaccaagaattcagcattcagaatgaa
gattttcctgctttgccaggatataaagcaggtggtcttaatgtcgggggcaatgcggaa
tataccataaatacccaccaaaaagaacagatccatgacagtatggcaaatttaatacag
tcccagcaattatccatgggaaggtcttctggattcaattttggtggctcatattcgtca
catcatcctcagcaacatcgcgcttcgtcaataaatggcacaggagtttcctatctaaca
tccggcaatcaagatcttcattttcacggtcctgatcaatatcagcaattccaacagtcg
caatctcgtttcatcaatcacccctttagagataaagacatgaaatccacgcagggatcc
caaactgtacctgaccaatacgggatgctcggtttattaagcatcataaaaatggtcaac
ccagctttgacctctcttgctttggggattgatctgacaactcttggtctgaacttaaac
tcatccgatactcttcacaagaagttcgcatctccttggtcagatgaacccgtgagagga
gagccagagtacgttgttcctgaatgttattatgacaaacaacgtcctccactgaatcaa
ggtacctttgcgagattccggccggaaacattgttatatgtcttttacagcatgccaaaa
gacgaggcgcaaatctttgcagcaaatgaactttacaacagaggatggttctaccacaga
gagcaccggttatggttcacaagggtggcgaacgtggaacctctcgtaaagacaaacagt
tacgagagaggttcctacatctgtttcgatcccaatacctggcatgcatcaagaaaggat
aactttgtcctgcaatatgaaatggttgagaaaaggccgacattgtctcagcagttgccg
ttgtag
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