Erythranthe guttata (spotted monkey flower): 105956314
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Entry
105956314 CDS
T07346
Name
(RefSeq) general negative regulator of transcription subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105956314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105956314
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105956314
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105956314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
105956314
NCBI-ProteinID:
XP_012835611
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALMDARKQIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKGETRDWLNNVVSELENQIDSFEAEIEGLSVKKGKTRPPRLTHLEASISRHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVES
LEDLVTIGPPGLVKGASATSAVLNMKTSLAAVPTPPATTSASVQQTPPLDQVDETALQDD
AVVRSPPPKGSSLSISAPQTPASGLAASAITSASSLVAVSSPIKEEEIANFPGRKSSPAL
AETGLRAIGKGGLPSQPTSDILPSSGNTIPSSGTIPLGSEMGKKKILVSDDRSASSGIAQ
SIVSPLGNRVILSQAAAKASDGLGSADTGNVSDAAIMGSRVFTSPVVPGMQWRPGSSFQN
QNEAGQLRGRTEIAPDQREQFLQRFQQVQQQGQTNLLGMPPLAGGKQYSAQQQNLLIQQF
NAQSSSISPQLGMGIGVQTSGLSSVTTPASLQSQPSAIHQASNQQAVISSISKDAETSLT
KVEELRQQQPFTEDSAPDSSSNSGLGKSLVQEDELKASYALDTAQAAVASVPLGEPSQVM
RETDLSPGQPLQPASLGVIGRRSVSDLGAIGDNISASTANSGGMHDQIYNLQMLEAAYYR
LPQPKDSERARTYTPRHPVVTPQSYPQVQAPIVNNPAFWERLGPDSYATDMLFFSFYYQQ
NTYQQYLAAKELKKQSWRYHRKFNTWFQRHEEPKVATDDFEQGTYVYFDFHISSDEQQGW
CQRIRTEFTFEYSFLEDDLII
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaagtcggaagctgcagggggagattgaccgagttctcaagaaggttcaagag
ggcgtcgatgtatttgatagcatctggaacaaggtttacgatacggacaatgcaaaccag
aaggaaaaattcgaggcggacttgaagaaggagataaagaagctgcagagatacagagat
cagatcaaaacatggatacagtccagcgagatcaaggataagaaggttagtgcctcttat
gagcaggctctgatggatgctcgaaagcaaattgagcgtgaaatggaacgatttaagata
tgtgaaaaagaaacgaagacaaaagcattctcaaaagaaggccttggccaacaacctaaa
acggatccaaaggaaaaggctaaaggagaaacaagagactggttaaataatgtggtcagc
gagctggagaatcaaattgatagctttgaagctgaaatagaggggctttctgttaagaaa
gggaagacgaggccacccagactgacgcatctggaggcatccattagtcggcataaagct
catattatgaagttagaattaattctaaggctgttggataatgatgaattgagcccagaa
caagtcaacgacgtaaaggatttcttggatgactatgtggaaagaaatcaggaggacttt
gatgaatttagcgatgtcgatgagctttacagttctttacctctggacaaggtggagtct
cttgaagatctagttactatcggtcctcctggtcttgtaaagggtgccagtgccaccagt
gcagttttaaatatgaaaacatctttggctgcagtacccactcctccagcaacaacctca
gcttccgtacagcagactcctcctctcgaccaggtagatgaaacagctttgcaggatgat
gcagttgttagaagtccacctcctaaaggtagttcccttagcatttctgcaccacaaacg
ccagcatcaggccttgcagcttctgccatcacaagtgcttcatccctagtagctgtatca
agtcctataaaagaagaggagattgcaaacttccctggtcgtaaatcatcaccagctctt
gctgaaaccggattgagggctattggtaaaggtgggttgccaagtcaaccaacttctgac
atccttcccagttctggaaacacaattcccagcagtggtaccattcctttgggttctgaa
atggggaaaaaaaaaattttggtatctgatgatcgatctgcgagtagtggtattgcacag
tctattgtatcccctctaggcaatagagtaatcttgtcacaagctgctgctaaggcgagt
gatggacttggatcagctgatactggaaatgttagtgatgctgcgattatgggcagcagg
gttttcacttctcctgttgttcctggtatgcaatggaggcccggaagttccttccagaac
cagaatgaagcggggcagcttcgtggaagaaccgaaatagctcccgatcaaagggagcag
tttttacaacgatttcagcaggtacagcagcaaggtcagactaatcttcttggcatgcct
cctcttgctggggggaagcagtactctgctcagcagcagaatctactcatacagcagttt
aatgctcaaagctcgtctatctcacctcaactcggaatggggattggagtccaaacttca
ggtcttagcagtgttacaacacctgcttctctgcagtcacaaccaagtgcaattcaccaa
gcatctaatcagcaggcagtcatatcttcaatatctaaggatgcagaaactagccttacg
aaagttgaggagttgcggcagcaacagcccttcacagaagactcggcgccagattctagt
tctaactccggcctaggaaaaagtcttgtgcaagaggatgaattgaaagcttcctatgcc
ttagatactgcacaggctgcagttgcttctgtaccacttggtgaaccttcccaggtgatg
agggaaactgacctttctccagggcaacctttgcaaccagcaagtcttggtgttattggt
cgaagaagtgtatctgatctaggtgctattggagataacatcagtgcatcaactgcaaac
tctggaggaatgcatgatcagatatacaatttacagatgctcgaggctgcttattataga
cttcctcaacccaaagattccgaacgtgcaaggacctatactccaaggcaccccgttgtc
actcctcagagttatcctcaagtgcaagcgccaattgtcaataatcctgccttctgggag
cggcttggtccagattcttatgccactgatatgctattcttttcattttactatcaacag
aatacttaccagcaatatttggctgctaaggaattgaaaaagcagtcttggaggtaccac
agaaaattcaatacatggttccaaaggcacgaggagccaaaagttgccacagatgatttt
gaacaggggacatatgtctactttgacttccatatttccagcgacgaacaacagggatgg
tgccagagaatcaggacagagtttacctttgagtacagttttcttgaagatgatctaatc
atatag
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