Erythranthe guttata (spotted monkey flower): 105956810
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Entry
105956810 CDS
T07346
Name
(RefSeq) ATP-dependent RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105956810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105956810
03012 Translation factors [BR:
egt03012
]
105956810
Enzymes [BR:
egt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105956810
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105956810
Translation factors [BR:
egt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105956810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
nSTAND3
FoP_duplication
Rad17
T2SSE
ATPase
Motif
Other DBs
NCBI-GeneID:
105956810
NCBI-ProteinID:
XP_012836166
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MSHTLLYNPFRHYCVFPLVQFRHTLSSAVHRQFIGSTNFCRNNTNRISAFTSMSQRPNFH
GGRRGGGGRGGGRGGGGRGGGRGGGGEQRWWDPVWRAERLRQQAAEKDVLDQNEWWGKLE
QMKRGGEQEMVIRRHFSRDDQQVFGDMANQLGLYFHAYNKGKALVVSKVPLPNYRADLDE
QHGSTTKEIKMSTETEERVGNLLNSSNGTKLVESKPSTSSQNATLKRKPVEVGTSQLEID
AASEGLSIELKQKQEKMREGDSVKAMLAFREKLPAFKVKADFLKAVAENQVLVVSGETGC
GKTTQLPQFILEEEISSLRGASCSMICTQPRRISAISVAARISSERGEKIGETVGYQIRL
ESKRSAQTRLLFCTTGVLLRQLVQDPYLTGITHLLVDEIHERGMNEDFLLIILRDVLPRR
PDLRLILMSATINADLFSKYFANAPTIHIPGLTFPVKEFYLEDVLEKTRYAIQSEYESFP
GNSRRGRRQQDTQKDPLTELFEDADIDALYKGYSTGTRRSLEAWSGSQLDLGLVESTIEH
ICRNEGSGAILVFLTGWDDISKLLDKLKANVILGDPNKVLLLPVHGSMPTINQREIFDRP
PPNVRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRR
GRAGRVQPGVCYRLYPKMIHDAMPQYQLPEMLRTPLQELCLHIKSLDLGAISTFLAKALQ
PPDALSVENAIELLKTIGALDDREELTPLGRHLCTLPLDPNIGKMLLMGSIFQCLDPALT
IAASLAHRNPFVLPINRKEEADDAKRSFAGDSCSDHVALVKAFEGWKDAKLNRNEKAFCW
ENFLSPVTMQMIGDMRNQFVDLLAGIGFVDKSRGAKAYNEYGDDLEMVCAILCAGLYPNV
AQCKRRGKRTALYTREVGKVDIHPGSVNAGVHLFPLPYMVYSEKVKTSSIYIRDSTSISD
YALLMFGGNLIPSKTGDGIEMLGGYLHFSASKTVLDLIRKLRGELDKLLTRKIKEPGVDV
TVESKGVVAALIELLHSQNVRCM
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacactctactttataaccccttccgccattactgcgttttcccactcgttcag
tttcggcataccctttcgtccgccgtgcaccgtcaatttatcggcagcactaacttttgt
aggaacaatactaatcggatctcagcatttacttccatgtctcaacgccctaacttccac
ggcggccgtcgaggcggtggaggacgcggaggcggccgtggcggtggaggaagaggcgga
ggtcgtggtggcggaggtgagcagcgatggtgggatcctgtttggagagctgagcgtctg
cgtcagcaagccgctgagaaagacgtattggatcagaatgaatggtggggaaaattggaa
caaatgaagagaggaggagagcaggagatggtaataaggcgacacttcagtagagatgat
cagcaagtctttggtgatatggctaatcagttgggtctttacttccatgcatataataaa
gggaaggcactcgttgtgagcaaagttccattgcctaattatcgtgcagatcttgacgaa
cagcatggctccactacgaaagagataaagatgtccacggaaaccgaggaaagagttgga
aatttattgaacagttccaatggaactaaattagtcgagagcaagccttctacatcctct
cagaacgcaacattaaaacgaaaaccagttgaggtcggcacatcacagttggagattgat
gctgcctccgagggacttagtattgaactgaaacagaaacaggaaaaaatgagggaaggg
gatagtgtaaaggcaatgctagcatttagagagaagctgccggcgttcaaagtaaaagca
gactttttgaaagctgttgcagaaaatcaggttctggtagtatcaggagagactggttgt
ggcaaaaccacacagcttccgcaattcatcctagaagaggagatatcatctctgcgaggt
gctagttgtagtatgatatgcacgcagcctcgaagaatatcggcaatatccgttgcagct
cgaatatcgtctgaaagaggagagaagattggtgaaactgtaggttatcagattcgtctg
gaatcaaaacggtctgctcaaacaagattgctattttgcaccacaggggttttacttcgg
cagctggtgcaggacccatatttaacaggaattactcacttgctggtggatgaaattcat
gaaagaggcatgaatgaggacttcctattgataatattgcgagacgtccttcctcgccgt
cccgaccttcgtcttatccttatgagtgccaccataaatgctgatctattctcgaaatac
ttcgcaaatgctccaaccattcatatccctggattgacatttccagtgaaagaattttat
ttggaagatgtcttagagaaaactcggtatgctatccaatcagagtatgaaagttttcca
ggaaactcaagaagaggtcggcgacaacaggatacccaaaaagatcctctgacagaatta
tttgaggatgcagacattgatgctctctacaaaggatatagtacaggcactaggcgatct
cttgaggcttggtctggttctcagttggatttgggccttgttgaatcaactatcgagcat
atatgtcgcaatgaaggtagtggagcaattcttgttttcctcactggatgggatgatatt
tcaaagctccttgataaacttaaagcaaatgtcattcttggagacccaaataaggtctta
cttcttcccgttcatggttcaatgccaacaatcaatcagcgcgaaatttttgatcggcca
cccccaaatgttagaaagattgtgttagctacaaacattgccgagagtagtatcaccata
gatgatgttgtgtacgttgtagactgtggaaaggcaaaggagactagttacgatgctctt
aataagttggcttgtcttttaccttcatggatttccaaggcatctgcacaccagagacgt
ggtcgtgcaggtcgtgtacaaccaggggtttgctacaggctttatcctaaaatgatccac
gatgctatgcctcagtatcaactgcctgaaatgcttcgaacacctctgcaagagctatgc
ctgcatataaagagtttggatcttggagcaattagtacatttttggctaaggcacttcaa
ccacccgatgctctctctgtagaaaatgccattgagctactcaaaactatcggtgccctt
gatgatagagaagagctgactcctcttgggcgtcatctctgcactttacctttggacccg
aatattggaaagatgcttctcatgggttctattttccaatgccttgaccctgcactaacc
atagctgcttctcttgcacatcgcaacccatttgttcttccaattaacaggaaagaggaa
gcagatgatgcaaaaagatcctttgccggtgattcatgcagtgaccacgttgctcttgtt
aaagcatttgaaggatggaaagatgctaaactcaatagaaatgagaaagccttctgctgg
gaaaattttctgtcaccagtaactatgcaaatgattggagatatgagaaatcagtttgtt
gatttactggcagggattggttttgtcgataaatcccgtggtgccaaagcatataatgag
tacggtgatgatttggagatggtgtgtgcaatactgtgtgccggactgtacccaaacgtt
gcgcagtgcaaaagaaggggaaaacgaacagctctatacactagagaagtcggaaaagtc
gacattcatccaggatctgtcaatgctggtgttcatcttttcccacttccttacatggta
tacagcgaaaaggtcaaaaccagtagcatatatataagagactcgactagtatatcggat
tacgctctgctcatgtttggtgggaatcttattccaagcaaaactggagatggtatcgaa
atgcttggcggataccttcatttttctgcatcgaagaccgttttggacttgatacggaag
ttgcgaggggagctggacaagcttctaacaaggaagatcaaggagccaggagtagatgtt
acggtagaaagtaagggtgttgttgcagctttaatagagctgttgcatagtcaaaatgtg
cgctgcatgtga
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integrated database retrieval system
