Erythranthe guttata (spotted monkey flower): 105959158
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Entry
105959158 CDS
T07346
Name
(RefSeq) uncharacterized protein DDB_G0283357 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105959158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egt03000
]
105959158
03019 Messenger RNA biogenesis [BR:
egt03019
]
105959158
04121 Ubiquitin system [BR:
egt04121
]
105959158
Enzymes [BR:
egt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105959158
Transcription factors [BR:
egt03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
105959158
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105959158
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105959158
Ubiquitin system [BR:
egt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105959158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Baculo_IE-1
zf-UDP
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
105959158
NCBI-ProteinID:
XP_012838656
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MSDGGEKTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDETEGRCPACRTPY
NKEKIVGTASSCERLVSEMNVEKKIKSQKGKSKISEGRKQLASVRVIQRNLVYVVGLPLS
LADEDILQYKEYFGQYGKVLKVSISRTAAGTIQQFANSTCSVYITYSKEEEAVRCIQSVH
GFVLDARPLRACFGTTKYCHAWLRSAPCTNVDCLYLHEIGSHEDSFTKDEIVSAYTRVQQ
ITGPSNGTQRRSGNVLPPPVDEYINNTPASSGKLISKPAVNTNQNSTISARVSPPNSSSG
RSAALPPGASWGTRASNNQSSLTSVECSNGPLKQKTDMCNETVACSTASASQSQISSFAS
NTRKELAPNEENISSQDKSLAEASGPSEEKSKTESRVIVSESSSASVHPANLLVNTESHG
LSTTKLLSRTNLLPNSNNTTVDSSLTSGRLISDTQSTDAKDRNMENVCSDFLSMSIHENH
VLENGHVQYTREPATSQMSGRGAANTSEQLDFKDVKSDLGLGMPSEATKVDLREIEDELL
SFDNQRLKDPEVPINRVLDFPLSHLSNHSSTYSQYSNANGLTSFDVDNQAMDRHRNLAGS
TSYFPHAYHENILRNPEVNDIEYSSLFPGKDKRSLLGRYEGEVARGASDMGESSIISNML
SIGFDRWDESLTSPQNLAKLLGETDKRQESFGIPISRKIHNSNQSRFSFAREEPISQTSD
FGQFFDRFEEGFKQPSFGHDFSNSNLRHETLASRNGFPVFNGMESEMFAGNHSFASSNRS
SGSRSQISAPPGFSVPSRAPPPGFISHERTDQILDSVPGNQMFDSSPFSRNLYHTLSGGN
NTISDGDIEFMDPAILAVGKGTVPAGINYSGVDLRSNFSSQQNSYEGARFQSFLQRSLPP
HQNQRYADMGDSFSPHGDAYGVPSRAVEQTLANNLSPYSQFNHPQSRNGITSNGQWDSWN
EVQGGNNLGMAELLRNERLGYNNNNSINNNNNNKFYNGYEDSKMRMPSSGNIYNGAYGI
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacggaggagagaagacttgccccctatgcgctgaggagatggatttgactgat
cagcagctgaagccttgcaagtgtggctacgagatttgtgtttggtgctggcatcatatt
atggatatggctgagaaagatgagacagaagggcgttgtccagcatgtcgtactccctat
aataaggaaaagattgttggaacagcttcgagttgtgaaaggcttgtttctgagatgaat
gtggagaaaaagattaagtcacagaaggggaagagcaaaatctcagaaggaaggaagcaa
cttgctagtgtacgagttatccagaggaatctcgtttatgttgtgggcttgccgcttagt
ttggcagatgaagatattcttcagtacaaagaatattttggtcagtacggaaaggtgctg
aaggtttctatctcccggacagcagctggtactatacaacagtttgcaaatagcacatgc
agtgtatatatcacatattcaaaggaggaagaagctgttcgatgtatccagtcagtacat
ggatttgttttggatgctagacccctgagggcatgcttcggcactactaaatactgccat
gcgtggctgagaagcgcgccttgcaccaacgtcgattgtctatatttgcacgagattggt
tcacatgaggacagttttactaaggacgaaatagtatctgcttacacaagggttcagcaa
attactggtccctcaaatggtacacaacggcgttcaggaaatgtgttacctccaccagtc
gacgagtatatcaataacacacctgcttcatctgggaagcttataagtaaacctgctgta
aatacaaatcagaactcaacaatcagtgctagagtttctccaccaaacagcagctctggt
agatctgctgctctcccccctggagcgtcatggggaactcgtgcttcaaataaccagtct
tcgcttacaagtgtagaatgttctaatggaccccttaaacagaaaacagatatgtgtaat
gagacagtggcatgctcaactgcaagcgcaagccaaagtcagatttcctcatttgccagt
aataccagaaaagaattggcccctaatgaagaaaacattagttctcaagataaaagttta
gcagaagcttcgggaccatccgaagagaaatcaaagacagaaagtagagttattgtttcc
gagagctcctccgcatctgtacatcctgccaacttgctcgtaaatacagagtcccatggc
ctatcaacaaccaagctgctatcaagaaccaatctgttacctaatagtaataatactact
gttgactcttcattaacttctggtcgacttatttcagacacacaatctactgatgccaaa
gatagaaacatggagaatgtatgctctgattttttatcaatgagcattcatgaaaaccat
gttttagaaaacggccatgtccagtacactagagaaccggctacttctcaaatgtctgga
agaggagctgcaaatacaagtgagcagctcgatttcaaagatgtcaagtctgatcttgga
ctgggaatgccaagtgaagcaacaaaagtcgatttgcgtgaaatagaagacgaattattg
tcttttgataaccaaagactaaaggatcctgaggttcctatcaacagagtactagatttt
cctctgtctcatctgtcaaatcattctagtacctattctcagtatagtaatgctaatggt
ttgacaagttttgatgtggataatcaggccatggatagacacagaaatttggcaggttct
acttcatattttcctcatgcatatcatgagaatatactcaggaatcctgaggttaatgat
attgaatattctagtttgtttcctggtaaggataaaaggtcactgctggggagatatgaa
ggtgaagtagctaggggggcttctgatatgggagagagcagtataatatctaatatgtta
tcgattggctttgatagatgggatgagtcattaacttcacctcagaacttggctaagttg
ttaggtgaaactgataaacggcaagaatcttttgggataccaatttcacggaaaatccat
aatagcaatcagtcaaggttttcgtttgctagagaggagcccattagccaaacatctgat
tttggacaattttttgatcgctttgaagaaggctttaagcagccttcttttggtcatgat
ttctctaacagtaacttgcgtcatgaaacgttagccagtcgcaatggttttcctgttttc
aatggcatggaatcagagatgtttgctggcaatcattcttttgcatcttctaacagaagt
tctggttcaagatctcaaatatcagcccctccaggattttctgtgcctagcagggcacct
ccaccaggctttatttctcatgaaaggacagatcaaatactggactcagtccctgggaac
caaatgtttgattcttcacctttttcaagaaatctttaccacacactatcaggtggtaat
aacaccattagtgacggtgatatcgagtttatggatcctgcaattttggcagtaggcaaa
ggcacagttccagctggcatcaactactccggcgtagacttgaggtcaaatttttcttca
cagcagaattcatacgaaggggcgagattccaatcgtttttgcaaagatcgcttcctcca
catcagaatcaaagatacgctgatatgggggatagtttttctccccatggtgatgcttat
ggagttccttctagagctgtggagcaaacactagccaataatctctctccatattctcag
ttcaaccatcctcagtctagaaatggtataacttctaacggccaatgggatagctggaat
gaggtacaaggtgggaataacttgggtatggcagaactactcaggaatgagagattgggg
tacaataataataatagcattaataataataataataataaattctacaatggttatgaa
gattccaaaatgcgaatgcctagttccggcaatatatacaatggggcttacgggatttaa
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integrated database retrieval system
