Erythranthe guttata (spotted monkey flower): 105959238
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Entry
105959238 CDS
T07346
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03015
mRNA surveillance pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105959238
09123 Folding, sorting and degradation
03018 RNA degradation
105959238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105959238
03041 Spliceosome [BR:
egt03041
]
105959238
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105959238
mRNA cycle factors
Stress granule specific factors
105959238
Spliceosome [BR:
egt03041
]
Complex C
Other components
Complex C specific factors
105959238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
RRM_RdRP1_2
RRM_MARF1
RBD_DGKtheta
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
105959238
NCBI-ProteinID:
XP_012838750
UniProt:
A0A022R8K6
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MAQMQVQQQNVAAAGPNGASAPGGAASGQFLSTSLYVGDLDFSVTDSQLYDTFNQVGQVV
SVRVCRDLSTRRSLGYGYVNYSNPQDAARALEALNFTPLNNKVIRVMYSHRDPSIRKSGT
ANIFIKNLDKGIDNKSLHDTFSTFGNILSCKIATDANGQSKGYGFVQFDSEEGAQKAIDK
LDGMLLNDKQVYVGHFLRKQERDTEFNKTKFNNVFVKNLAESTTDDDLKTAFGEYGTITS
SVVMRDADGKSRCFGFVNFENVDDAAKAVEALNGKKIDDKEWFVGKAQKKSEREQELKSK
FEQTSREAVEKFQGVNLYVKNLDDGIDDEKLKELFAEFGTITSCKVMRDPSGISRGSGFV
AFSSAEEASRALSDMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPIAMAPSIAPRM
PMYPPGAPGIGQQMFYGQGPAMIPPQAGFGYQQQLVPGMRPGGGPLPNFFMPMVQQGQQG
PRPGGRRGSGPVQQTQQPVPLMQQQMVPRGRMFRYPQGRDGPMPGVGGGMLSVPYDMGSG
MLPRDSAPIQQQQPMPITALATALANATSDQQRTMLGENLYPLVDQLEHEHAAKVTGMLL
EMDQTEVLHLLESPDALKAKVNEAMDVLRNVQQQANGPADQLASLSLNDTLVS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagatgcaggtgcagcaacagaatgtggcggcggctgggcccaacggagcgtcg
gctcccggtggagcggcgtctggacagtttctgtcgacgtctctgtatgtgggtgacttg
gacttcagcgtgacggactcgcagctctacgatacgttcaatcaggtcggccaggtggtc
tcggttagggtttgtcgagatctcagcactcgccgcagccttggctatggttacgtcaac
tacagcaacccccaggatgctgcaagagctttggaagctttgaacttcactccgctcaac
aacaaggtgatccgagtcatgtattctcatcgggacccaagcattcggaaaagtgggaca
gcaaatatatttatcaagaatttggacaaaggaattgacaacaagtcactgcatgacacc
ttctcaacctttggaaacatcctctcttgcaagattgcaacagatgctaatggccaatca
aagggctatggatttgtacaatttgatagcgaagaaggtgcacaaaaagccatagataag
ttagatggcatgcttttgaatgataagcaggtgtatgttgggcatttcctccgcaagcag
gagcgagatactgaatttaacaagacaaagttcaacaatgtctttgtgaaaaatcttgct
gagtctactacagatgatgatttgaagacagcttttggtgaatatggaacaatcactagt
tccgtggtgatgagggatgccgatgggaagtccagatgttttggatttgtcaattttgag
aacgttgatgatgctgccaaagctgttgaagctctcaacgggaagaaaattgatgataag
gagtggtttgttgggaaagcccagaagaagtctgagagagagcaagaacttaaaagtaaa
tttgagcaaacttccagggaagctgttgaaaaatttcaaggagttaatttatatgttaag
aacttggatgacggcattgatgatgagaagctgaaagaactgttcgccgagtttggtacc
atcacatcatgcaaggttatgcgtgatcctagtgggataagcagaggatctggatttgtt
gccttttcatccgcggaagaagcttcccgtgctctttctgatatgaatgggaaaatggtg
gtcagcaagccactctatgttgcgcttgcacagcggaaagaagaacgaagagcaagattg
caggctcagttttcacagatgagacctattgcaatggcaccatcaattgctcctcgtatg
ccaatgtatcctcctggtgctcctggaattgggcagcagatgttttatggtcaaggccct
gctatgattcctccacaggctggatttggttatcagcagcagcttgttcctggaatgcgt
cccggtggtggtcccctgccgaatttttttatgccgatggtccaacagggccagcagggg
ccacgtccgggtggcagacggggatctggtcctgtacaacagactcagcagcctgttccg
cttatgcagcaacaaatggtaccaaggggtagaatgttccgttatcctcagggtcgcgat
gggcccatgccaggtgtcggtggaggaatgctttctgttccatacgacatgggtagtggc
atgcttcctcgtgattctgctcctattcaacaacagcagcctatgcctatcactgctctc
gctaccgcacttgctaatgcaacttctgaccagcagagaactatgttgggcgagaacttg
tacccactagttgaccagctggagcacgagcatgctgcgaaagtgacgggtatgcttttg
gagatggaccagacggaggttctgcatttgctggaatcgccagacgctttgaaagctaag
gttaacgaagctatggatgtcttaaggaatgttcagcagcaagccaacggcccagccgac
caactcgcctctctgtcgctcaatgacacccttgtctcttag
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integrated database retrieval system
