Erythranthe guttata (spotted monkey flower): 105959239
Help
Entry
105959239 CDS
T07346
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03015
mRNA surveillance pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105959239
09123 Folding, sorting and degradation
03018 RNA degradation
105959239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105959239
03041 Spliceosome [BR:
egt03041
]
105959239
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105959239
mRNA cycle factors
Stress granule specific factors
105959239
Spliceosome [BR:
egt03041
]
Complex C
Other components
Complex C specific factors
105959239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_Nup35
RRM_RdRP1_2
SET_assoc
RRM_MARF1
RBD_DGKtheta
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
105959239
NCBI-ProteinID:
XP_012838751
UniProt:
A0A022R9A7
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MAQTQAVQQNLSAAATGGANGAAGGQFLSTSLYVGDLDFNVTDSQLYDLFNQVAQVVSVR
VCRDLSTRRSLGYGYVNYSNPQDAARALESLNFALLGNKNIRVMYSHRDPSIRKSGTANI
FIKNLDKGIDNKLLHDTFSTFGNILSCKIATDGNGQSKGYGFVQFDSEEGAQKAIDKLNG
MLLNDKQVFVGHFLRKQERDIAFGKTKFNNVFVKNLAESTTDDDLKTIFGEYGAITSSVV
MRDSDGKSRCFGFVNFENADDAAKAVEALNGRKSDDKEWYVGKAQKKYEREQELKSRFEQ
TAREAVDKFQGVNLYIKNLDDSIDDEKLKEMFSEFGTITSCKVMRDPSGISRGSGFVAFS
SQEEASRALTDMNGKMVISKPLYVAVAQRKEDRRARLQAQFSQMRPVAIPPSIAPRMPMY
PPGAPAMGQQLFYGQGPAMIPPQAGFGYQQQLVPGMRPGGAPMPNFFMPMVQQGQQGPRP
GGRRGPGPMQQTQQPVPLMQQQMVPRGRMYRYPTGRDGPMPGVGGGMLSVPYDMGGMLPR
DSAPIQPQQPMPITALATALANATPEQQRIMLGENLYPLVDQLEHEHAAKVTGMLLEMDQ
TEVLHLLESPDALKAKVNEAMDVLKNVQQQASSPSDQLASLSLNENLVS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagactcaggcggtgcagcagaatttgtcggcggcggcgactggcggagcgaat
ggggcggcgggaggacagtttctgtcgacgtctctgtacgtgggcgatttggatttcaat
gtgacggactcccaattgtacgatctgttcaatcaggtcgcccaggttgtctctgttagg
gtttgcagagacctcagcactcgccgcagcctgggttatggttatgtcaactacagcaac
ccccaggatgctgcaagggctttggaatcgttgaactttgctctacttggcaacaagaat
atccgagtgatgtactcgcatcgggacccaagcatccgaaagagtggaactgcaaatatc
ttcattaagaatttggacaaaggaattgataacaagttactgcacgacaccttttcaacc
tttgggaacatcctctcgtgcaagattgcgacagatggcaatggccaatcgaagggctac
ggattcgtacagtttgatagtgaagaaggcgcacaaaaggccatagataagttaaacggc
atgcttttgaacgacaagcaagtgtttgttggtcatttcctccgtaagcaggagcgagat
attgcgtttggcaagacaaagttcaacaatgtatttgtgaaaaatcttgccgagtctact
acagatgacgacttgaagacaattttcggcgaatatggtgcaatcactagctctgtggtg
atgagggattccgatggaaagtcgagatgtttcggatttgtgaatttcgaaaatgctgat
gatgctgctaaagctgttgaagctctcaacgggaggaaatctgacgacaaggagtggtat
gttgggaaagcccaaaagaagtacgagagggagcaagaactgaagagtcgatttgagcag
accgctagggaagccgtcgacaaatttcaaggggttaatttatatattaaaaacttggat
gatagcatcgatgacgaaaagctgaaagagatgttttcagagtttggtactatcacttct
tgcaaggttatgcgggatccgagcgggataagccgagggtctggattcgttgcattttcg
tctcaagaagaagcttctagagcacttaccgatatgaacgggaagatggtgattagcaag
ccactgtatgttgcggttgcacagcgtaaagaagatagaagagcaaggttacaggcccag
ttttcacagatgaggcctgttgcaattccaccgtcgattgctcctcgtatgccgatgtac
cctcccggtgctcctgctatgggtcaacagctgttttacggtcaaggtcctgccatgatt
cctcctcaggctggatttggttatcagcagcagcttgttcccggaatgcgccctggaggt
gcaccaatgccgaatttctttatgccgatggtccagcaaggccagcagggcccacgtcca
ggtggcagacgaggacctggccccatgcaacaaactcagcagcctgtaccgctcatgcag
caacaaatggtaccaaggggtagaatgtaccgttaccctacaggtcgagacgggcccatg
ccaggtgtcggtggaggaatgctttccgtaccatacgacatgggcggcatgcttcctcgc
gactctgctcctattcaaccgcaacagcctatgccaatcaccgctctcgcaacagcactt
gctaacgcaactcccgaacaacagaggattatgctgggggaaaacttgtacccactggtt
gaccagctggagcacgagcatgcagcgaaagtgacggggatgcttctggagatggaccag
acggaggttctgcatttgctggaatcgcccgacgcgttgaaagctaaggttaacgaagct
atggatgttcttaagaatgttcagcagcaggctagtagcccttccgaccaacttgcttct
ctctcactcaatgagaatcttgtttcttga
DBGET
integrated database retrieval system
