KEGG   Erythranthe guttata (spotted monkey flower): 105959494
Entry
105959494         CDS       T07346                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
egt  Erythranthe guttata (spotted monkey flower)
Pathway
egt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105959494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:egt03041]
    105959494
Spliceosome [BR:egt03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    105959494
 Complex C
   U5 SnRNP specific factors
    105959494
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_EML NBCH_WD40 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd ANAPC4_WD40 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_WDR35_TULP_N eIF2A Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_RIG_1st Beta-prop_Nup120_160 Cytochrom_D1
Other DBs
NCBI-GeneID: 105959494
NCBI-ProteinID: XP_012839056
UniProt: A0A022RDQ0
LinkDB
Position
Unknown
AA seq 339 aa
MQVESALSVVGPKPTELSTVTHGFAPPGANAKQRTSSLEAPIMLLSGHQSAVYTMKFNPA
GTVIASGSHDRDIFLWNVNSDCKNFMVLRGHKNAVLDLQWNTDGSQIISTSPDKTLRAWD
VETGKQIKKMIGHLFVVNSCCPARRGPPLIVSGSDDGTAKLWDMRQRGSIQSFPDKYQIT
AVGFSDASDKIYTGGIDNDVKVWDLRRTEPVMKLQGHHDMITGMQLSPDGSYLLTNSMDC
TLRIWDMRPYAPQNRCVKILEGHQHNFEKNLLRCSWSPDGSKVTAGSSDCMVYVWDTTSR
RILYKLPGHTGSVNECVFHPNEPIIGSCSSDKQIYLGEI
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgcaggtggaaagtgctctatcagtagttggcccaaagccaaccgagctgtcaactgtc
acacacggcttcgccccaccaggagcaaatgcaaagcagcgaacgtcaagcttagaggca
ccaatcatgttgctgtcgggccatcaaagtgcagtctacacaatgaaattcaatcccgca
ggaaccgtaatagcatctggctcgcacgatagggatatctttctctggaatgtgaacagc
gattgcaagaatttcatggtcttgagagggcacaagaacgctgtactggacctccaatgg
aacacagacggatcacaaataatatcaacgagcccagataaaacactaagagcatgggat
gtcgagacaggcaaacagatcaagaagatgattggtcacttgtttgtcgtgaattcttgc
tgtcctgcccgaaggggcccaccccttattgtcagtgggtccgacgatggaactgcaaag
ctttgggatatgcgtcaaaggggctccatacagagttttccagacaagtaccagattaca
gctgtcggtttctctgatgcgtcggacaagatttacactggcggcattgacaacgatgtg
aaggtgtgggatttacgtaggactgagcctgtgatgaagcttcaaggtcatcatgatatg
attaccggtatgcagttgagcccagacgggtcctaccttctaaccaacagcatggattgc
actcttcggatatgggatatgagaccatatgcaccgcagaaccgatgtgtgaagattcta
gaagggcatcagcacaactttgagaagaatttgctgaggtgtagttggtcgcccgatgga
agcaaagtgacagctggcagtagtgactgcatggtctatgtatgggacactacctcacgg
agaatattgtataagcttccgggtcatactggatcggttaatgagtgtgtctttcatccc
aacgaacctattattgggtcatgcagcagcgacaagcagatatatcttggtgaaatttaa

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