Erythranthe guttata (spotted monkey flower): 105962099
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Entry
105962099 CDS
T07346
Name
(RefSeq) probable RNA polymerase II transcription factor B subunit 1-1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03022
Basal transcription factors
egt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105962099
09124 Replication and repair
03420 Nucleotide excision repair
105962099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egt03021
]
105962099
03400 DNA repair and recombination proteins [BR:
egt03400
]
105962099
Transcription machinery [BR:
egt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105962099
DNA repair and recombination proteins [BR:
egt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105962099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GRAM
SHOCT
DUF3072
Motif
Other DBs
NCBI-GeneID:
105962099
NCBI-ProteinID:
XP_012841835
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MAAKQVIKRAKYKSAVKDPGVPGILELTIERFVFRPNDPKSTTKLNVEFKLIKGHKFTKD
GSKQALLNLTQDQGGNYIFEFTNFADRDVCKEFVANALAFHSESGKTIPEKSDVPVNEHL
STAETEQRIKLLQENSELQTLHKQFVFKGILTDAEFWATRKKLLEQSDGRRRKQRLALKN
EMWTVKPLSDGQSNKVTFNLTPEIIHQIFSEKPAVRQAYLNFVPHRLSEKDFWTKYSKAE
YLNSSRNVSVAAAEAALDEELAVFLKRDDMLADEARRKVRRVDPTVDMQADEGDDYIHLQ
DHGLVHDEPKDYMESQYEPFRKSFSQDLNQHGAVVLQGRVLDAELRDTRSVAEAIIRIKQ
AELSDEVSTRNLERDISDRISRMAEMEDLQGPRDPAVAPLSIKDPRDYFDSQQANALKAL
ADGSGGERTLKSSVSSHEAYGSLKNLVSHNRVMGLTEPVMSHEVALKVLSALTQNISSTK
FHLGSNPHESVLDRLPKSTKDELLIQWTSVQELLKHFWSSYPITTKYLYTKVTRMKDAMS
QIYLKLQEIKESVPSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSTKG
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaagcaagtgattaagcgtgccaagtacaagtctgcagtgaaggaccccggg
gttcccggcattctcgaattgacaatcgaaagatttgtttttaggccaaacgatccaaaa
tcaaccacgaagctaaacgtggagttcaagctgattaaagggcataaattcaccaaagat
ggttccaaacaggccctgctgaatctcacccaagaccaggggggtaattatatttttgaa
tttactaattttgctgaccgtgatgtatgcaaagaattcgtcgcgaatgctcttgcattt
cattctgaatctgggaaaacaatacctgaaaaatctgacgttccagttaatgaacatctt
agcaccgcagagacagagcaacgtattaagctactgcaggagaacagtgaactacagaca
cttcacaagcaatttgtcttcaaaggtattctcacagatgctgaattttgggcaacaagg
aagaaattactggaacagagtgatggcagaaggcgaaaacagcggctagcattaaaaaat
gaaatgtggactgtgaaaccattatccgatggtcagtcaaacaaagtgacatttaacttg
acaccagaaatcattcatcagatattttccgaaaaaccagcagttcgccaagcatatttg
aattttgtccctcacagactgtcagaaaaggatttctggaccaaatattcaaaagcagaa
tatctgaatagttcaagaaatgtaagcgttgcagcagcagaggctgctttagatgaggag
cttgctgttttcctaaagcgagatgatatgctggcagatgaagctcggagaaaggtcagg
cgtgtggatccaaccgtggacatgcaagctgatgagggcgatgattacatacatctccag
gatcatggattagtgcatgatgaaccgaaggattatatggaatcgcaatatgaaccattt
cggaagtccttctcacaagatttgaatcagcatggtgctgttgttcttcaaggaagagtt
ctagatgccgagctaagagatacaaggtctgttgctgaagccattatcaggataaaacag
gcggaactttctgacgaagtatccaccaggaatttagagagagatatctcagacaggatt
tctcgaatggccgaaatggaggatcttcaggggcctcgagatcctgcagtcgcccccctc
agtattaaggatccgcgcgactactttgattctcaacaagctaatgcgctaaaagcattg
gccgatggtagtggaggtgaaagaacattaaaatccagcgtcagttcacatgaagcttat
ggttcgttaaagaatctcgtctctcacaatagagtcatgggtttgactgaaccagtgatg
agtcacgaggttgctcttaaggtcctcagcgcattgacccagaatatctccagcaccaag
tttcatcttggaagcaatccacacgagagtgtcctggacagattgccaaaatcaacgaaa
gatgaacttttgattcaatggacttccgttcaggaactgttgaaacacttctggtcgtct
tacccaattacgacgaagtacctctatacaaaggttaccagaatgaaagacgctatgtcg
cagatttatctgaagttgcaggagattaaggaatcagtgccgtctgatttcaggcatcaa
gtctctcttcttgttcacccgatgcttcaggctctagatgccgcctttgcacactacgat
gccgatgtacaacgaagatcgaccaagggttga
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