Erythranthe guttata (spotted monkey flower): 105962786
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Entry
105962786 CDS
T07346
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 40-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105962786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egt03041
]
105962786
03009 Ribosome biogenesis [BR:
egt03009
]
105962786
Enzymes [BR:
egt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105962786
Spliceosome [BR:
egt03041
]
Complex A
U1 snRNP components
U1 related factors
105962786
Complex B
105962786
Ribosome biogenesis [BR:
egt03009
]
Eukaryotic type
Pre-60S particles
Helicases
105962786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
WW
Motif
Other DBs
NCBI-GeneID:
105962786
NCBI-ProteinID:
XP_012842563
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MSTAEASPSSLGPRYAPDDPTLPEPWKGLIDGSTGVLYYWNPETNVTQYEKPASVPPPLP
LGPPPAASTPKMNPVPAARDSTQVPQNQQMVQTHQQMHVVSQATQQQAGPPGQFQGSYMG
PIQHGPEQVRPQMMQQHGQQGPSQWGQMSTQPGQQGFQQSMQQIPMQTGHQAPYQSMQQM
PHVQHGQMYPGAQMGSPHGYQFSHQHSQYMVHQQNVPPQGPQSSLQQVPHKQEHKMEPGQ
RDDIDFNQGKQPGFSPANQHLVQGQQFPHLREQKTGIPQRDDVEFQQGNQAGFSPGQTRT
PSVQKMSIQLSQNAQYGGSSANTQQNNPSAHVQQTGVELPHAQHGSRFQNQIGPGMVHGQ
QQNPPPGRSNRPYEENHPGRPGNDLFYNTPTDVSAMPPHLPKLAPLPMTRNQQEMRTGDF
PPQNVAPSLPVNMNGPGGPPLHGAYGHASAAPPYPNNNFVRPPLAMMGSSDPIHLSAAEI
YRQKHEVSATGEDVPAPFMTFEATGFPPEILQEIHFAGFSAPTPIQAQTWPIALQGKDIV
AIAKTGSGKTLGYLMPAFIHLKRRRNNPQNGPSVLVLAPTRELATQIQDEAIKFGRSSRF
SCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKRIDFRQVSLLVLDEADRMLDM
GFEPQIRKIVNEIPPRRTPCWLRTSCTAVLNKS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgctgaggcatccccaagtagccttgggccgagatatgctccggatgatcca
actctacccgaaccctggaaaggtttaattgatggaagtacaggcgttttatattattgg
aatcctgaaacaaatgttactcagtatgaaaaaccggcttctgtgccaccacctttgccg
cttgggccaccacctgcagcttccacacctaagatgaatcctgtaccggcagccagagac
agtactcaagttcctcaaaatcagcaaatggtgcaaacacatcaacaaatgcatgtagtt
tcacaggccactcaacagcaagctggacctcctgggcagtttcaggggtcatacatgggg
ccaattcaacatggaccggagcaagtgagaccacaaatgatgcaacagcatggtcaacaa
gggccatctcagtggggacaaatgtctacacagccagggcaacaaggatttcagcagtca
atgcagcaaatccctatgcagacagggcaccaagctccttatcagtcaatgcagcaaatg
ccccatgtccaacatggtcaaatgtaccctggtgcgcagatgggatctccacatggttat
caatttagccatcagcattcacaatacatggtgcatcagcagaatgtgcctcctcaaggg
ccacaaagctccttgcaacaggtgcctcacaaacaagagcataaaatggaacctggtcag
agagacgatattgattttaatcaagggaaacagccaggattttcacccgccaatcagcat
ttggtacaagggcaacaatttcctcatctccgagagcaaaaaactggaattcctcagaga
gatgatgttgagtttcaacaaggaaaccaggcagggttttcacctggccagactcggaca
ccatctgtgcagaagatgagcattcagctaagtcaaaatgcacagtatgggggatcatct
gctaatacgcaacagaacaatccttcggctcatgtgcagcaaacaggagtggaattacca
cacgcacaacatggttctaggtttcagaatcagataggccctgggatggtgcatggccag
cagcagaatccaccgcctggtagatcaaataggccatatgaagaaaaccatcctgggaga
cctggaaatgatttattttacaacactccaactgatgtcagtgcaatgccccctcattta
cccaaacttgcaccactacccatgaccagaaatcagcaggaaatgaggactggtgatttc
ccccctcaaaatgttgcacccagtcttccagtgaatatgaatggtcctggaggccctccc
ttgcatggggcctatggtcatgcatctgctgctcctccatatccaaacaataattttgtg
aggcctcctttggcaatgatgggatcttcagatcctattcatttatcagctgcagaaatt
tatcgtcaaaagcacgaagtctcagccacgggcgaagatgttccagctccatttatgacg
tttgaagccactggatttccaccagaaatactgcaggagatacattttgctggtttctct
gctcccacaccaattcaggcacagacgtggcctattgctttacagggcaaggacatagtt
gctattgcgaagacaggatctgggaaaacgctaggatacttgatgccggcattcatacac
ctcaagcgaaggcgtaataatcctcagaacggcccatctgttttggtattggctccaacc
agggagcttgccacccaaatccaagatgaagcgatcaaatttgggagatcatctaggttc
tcttgcacgtgcttatatggtggtgctccaaaaggacctcagttgaaagagctagaacgg
ggagcagatattgttgtggcaactcctggtcggctcaatgacatccttgagatgaagagg
attgacttcaggcaggtctcgcttcttgttcttgatgaggctgatagaatgctggatatg
ggatttgagcctcagatccgtaagattgtgaatgagattcctccgagaaggaccccatgt
tggcttcgtacgagctgcactgccgtcttgaataaatcctga
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