Erythranthe guttata (spotted monkey flower): 105962838
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Entry
105962838 CDS
T07346
Name
(RefSeq) eukaryotic initiation factor 4A-3-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03013
Nucleocytoplasmic transport
egt03015
mRNA surveillance pathway
egt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105962838
09122 Translation
03013 Nucleocytoplasmic transport
105962838
03015 mRNA surveillance pathway
105962838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105962838
03041 Spliceosome [BR:
egt03041
]
105962838
03009 Ribosome biogenesis [BR:
egt03009
]
105962838
03012 Translation factors [BR:
egt03012
]
105962838
Enzymes [BR:
egt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105962838
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105962838
mRNA cycle factors
Stress granule specific factors
105962838
Spliceosome [BR:
egt03041
]
Complex C
Other components
EJC/TREX
105962838
Ribosome biogenesis [BR:
egt03009
]
Eukaryotic type
90S particles
Helicases
105962838
Translation factors [BR:
egt03012
]
Eukaryotic type
Initiation factors
eIF-4
105962838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
Cas3-like_C_2
Helicase_RecD
AAA_22
CMS1
Motif
Other DBs
NCBI-GeneID:
105962838
NCBI-ProteinID:
XP_012842632
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MAAASIERGGGRRAMEEEDDAKLVFETSKGVERIMSFDEMGIKDGLLREIYNYGFEKPSA
IQQRAVLPIISGRDVIAQAQSGTGKTSMIALAVCQIADTKSSEVQALILSPTRELAAQTE
KVISAIGDYINIQSHACIGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRSIKL
LILDESDEMLSRGFKDQIYDVYRYLPPEIQVVLVSATLPNEILEMTSKFMTDPVRILVKR
DELTLEGIRQFFVAVEREEWKFDTLCDLYDILTITQAVVFCNTKQKVDWLAAQMRKNNFT
VSSMHGDMPQKERDAIMGEFRSGQTRLLITTDVWARGLDVQQVSLVINYDLPNNRELYIH
RIGRSGRFGRKGVAISFVKSDDIKILRDIEQYYSTQIDEMPMNVADLV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgagcattgagagaggaggagggcggcgagctatggaggaggaggacgac
gctaagctcgtatttgagacttcgaaaggcgtggagcgaatcatgagcttcgacgagatg
ggaataaaggacggcctcctcagagaaatctacaactatgggttcgagaagccttccgca
attcagcagcgcgctgtcctccccattatctctggccgtgacgttattgctcaggcgcag
tctggtacgggcaagacttccatgattgctcttgctgtttgccagattgccgataccaag
tcctcagaggtccaagccttgatactgtcacctacaagagagctggctgctcagacagag
aaagtaatatcggcaattggtgactatataaatatacaatctcatgcttgtattggaggc
aaaagtgtgggtgaggatataagaaaattagaacatggagttcatgtggtatcgggtact
ccaggcagagtttgtgacatgatcaagaggagaactttacgaactagatcaatcaaatta
ttaattctggatgagtctgatgaaatgctgagcagagggtttaaggatcagatttatgat
gtttacagatatcttccgccagagattcaggttgtcctggtctctgccacccttccaaat
gaaatattggagatgacaagcaaattcatgactgatcctgttcggatacttgtaaagcgt
gatgaactgacccttgagggcatcaggcaattttttgttgccgtagaaagagaagaatgg
aaatttgacactttatgcgatttatacgatatcctcacaattacccaagctgttgtcttc
tgtaacacgaagcagaaggtggattggctggcagcacaaatgcgtaagaataacttcacc
gtctcttctatgcatggagatatgccacaaaaggagcgagatgcaattatgggagaattt
cgctctggccagaccagacttcttataacaacagatgtatgggctaggggactggatgtt
caacaggtatctttggtgattaattatgatcttccaaacaacagagagctttacatccat
cgtattggaagatccggccggtttgggaggaagggtgttgccataagttttgttaaaagt
gatgacatcaaaatcttaagagatatcgagcaatactacagtacacaaatcgatgaaatg
ccaatgaacgtggctgatctggtttag
DBGET
integrated database retrieval system
