KEGG   Erythranthe guttata (spotted monkey flower): 105963358
Entry
105963358         CDS       T07346                                 
Name
(RefSeq) sm-like protein LSM5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
egt  Erythranthe guttata (spotted monkey flower)
Pathway
egt03018  RNA degradation
egt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105963358
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105963358
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egt03019]
    105963358
   03041 Spliceosome [BR:egt03041]
    105963358
Messenger RNA biogenesis [BR:egt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105963358
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105963358
Spliceosome [BR:egt03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105963358
SSDB
Motif
Pfam: LSM DUF7452 SM-ATX
Other DBs
NCBI-GeneID: 105963358
NCBI-ProteinID: XP_012843204
UniProt: A0A022QXL1
LinkDB
Position
Unknown
AA seq 88 aa
MSSNNPSQLFPSELIDRCVGSKIWVIMKGDKELVGILRGFDVYVNMVLEDVTEYEITSEG
RRITKLDQILLNGNNIAILVPGGSPDSE
NT seq 267 nt   +upstreamnt  +downstreamnt
atgtcgtcgaacaatccgtcgcagctcttcccatcagagctgattgatcggtgcgtcggg
tcgaaaatatgggttataatgaagggagacaaagagttggttggtattctccgtggattc
gatgtttatgttaacatggtgttggaggatgttactgaatacgagatcacctccgaagga
agacgcattacaaaactcgatcaaatcttgcttaatggaaacaacattgcaatactggtt
cccggtggctcacccgactcggaatga

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