Erythranthe guttata (spotted monkey flower): 105963567
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Entry
105963567 CDS
T07346
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 56
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03013
Nucleocytoplasmic transport
egt03015
mRNA surveillance pathway
egt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105963567
09122 Translation
03013 Nucleocytoplasmic transport
105963567
03015 mRNA surveillance pathway
105963567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105963567
03041 Spliceosome [BR:
egt03041
]
105963567
Enzymes [BR:
egt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105963567
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105963567
Spliceosome [BR:
egt03041
]
Complex C
Other components
EJC/TREX
105963567
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105963567
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
YihI
Motif
Other DBs
NCBI-GeneID:
105963567
NCBI-ProteinID:
XP_012843429
UniProt:
A0A022QYC3
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MGDTKENEAYEEELLDYEEEEEKAPDSVTAKANGESGKKGYVGIHSSGFRDFLLKPELLR
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTMQQIEPIAGQVAALV
LCHTRELAYQICSEFDRFSTYLPGTKAAVFYGGVSIKNHKDILKNECPQIVVGTPGRILA
LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPI
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS
RAAELNKLLVDCNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI
DTSTYMPS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactaaggaaaacgaggcgtacgaagaagagcttctcgattacgaggaggaa
gaagaaaaagcccctgattcagttaccgccaaagccaacggggagtccggcaaaaagggc
tacgtagggatccacagttcaggatttagagacttccttttgaagccagagcttttacga
gctattgttgattcgggatttgaacatccatcagaagttcaacatgaatgcatacctcaa
gcaattttgggaatggatgttatttgccaagcgaagtctggtatggggaaaactgcggtg
tttgtgctttcaacaatgcagcagattgaacccattgcaggtcaagttgctgctcttgtc
ctatgtcatacgagggaactggcttatcagatctgtagtgaattcgatcgattcagcact
tacttaccaggcactaaagctgctgttttctatggcggtgtcagcataaaaaatcacaaa
gatattctgaagaacgagtgtccccagattgttgtagggactccagggaggattcttgct
ctagcaagagagaaggacctttctttaaaaaatgtgaggcatttcattctggatgagtgt
gacaagatgctcgagtctcttgatatgcggcgagatgtgcaggagatattcaaaatgaca
cctcatgataagcaagttatgatgttttctgctacgctcagcaaggagattcgacctatc
tgcaagaaatttatgcaagatcctatggagatttacgtggatgacgaagcgaaattgaca
cttcatggtcttgtacagcactacatcaaattgagtgagctagagaaaaaccgaaagctg
aacgatcttcttgatgcattggacttcaatcaagttgtcatctttgttaaaagcgtcagt
agagctgctgagctgaacaagttgcttgtggactgtaattttccatctatatgcattcac
tctggcatgtcccaggaagagagattgacgcgatacaagtcattcaaggaggggcacaaa
aggattcttgttgcaacggatttagtcggaagaggaattgacatagaacgagtgaacatt
gtcattaactatgatatgccagattcagctgacacttatctgcatagggtgggtagagcg
ggaaggtttggtacaaaagggcttgccatcacttttgtttcatcagcttctgattcagat
gttctaaatcaggttcaagaaaggtttgaagttgatattaaagaactgcctgagcagatt
gacacttctacatacatgccgtcgtag
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