Erythranthe guttata (spotted monkey flower): 105963771
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Entry
105963771 CDS
T07346
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105963771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105963771
03036 Chromosome and associated proteins [BR:
egt03036
]
105963771
Enzymes [BR:
egt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105963771
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105963771
mRNA degradation factors
5'-3' decay
Decapping complex
105963771
Chromosome and associated proteins [BR:
egt03036
]
Eukaryotic type
Gene silencing
piRNA pathway
105963771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
NA-iREase2
Aldedh
Motif
Other DBs
NCBI-GeneID:
105963771
NCBI-ProteinID:
XP_012843679
UniProt:
A0A022QTR8
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MNSRARYPPPGMGAGRGGGGGGGGGGMNPHAGPNPNFQPRYANQQYAERSPARNNQNQEL
FQNPQPQQWLRRNQLPPVDSAVDEVEKTVQSEAVDSSSQDWKGRLKLPPVDTRYRTEDVT
ATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFC
IPALEKIDQDKNVIQAVILVPTRELALQTSQVCKELAKHLQIQVMVTTGGTSLRDDIMRL
HQPVHLLVGTPGRILDLARKGICILNECNMLVMDEADKLLSPEFQPSIEQLIRFLSANRQ
ILMFSATFPVTVKDFKDRYLRKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKL
QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD
LFTRGIDIQSVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQE
LGTEIKQIPPQIDQAIYCQ
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgagagcgagatacccgccgccgggaatgggcgctggccgaggcggaggcgga
ggtggaggcggcggcggaatgaacccgcacgcaggaccaaaccctaattttcaaccaaga
tacgcaaatcaacaatacgcagagaggagtccagcgcggaacaatcagaatcaggaatta
tttcaaaaccctcaaccgcaacaatggctgcgaagaaatcagcttccgccggttgattcc
gcagtcgatgaggtcgaaaagactgtacaatcagaagccgtcgattctagttcccaagat
tggaaaggaagattgaagttgccaccagtagacacccgatatagaactgaggatgttaca
gcgaccaaaggaaacgagttcgaagactactttttgaagcgcgagcttctgatgggaata
tacgagaagggctttgagaggccatctccaatccaagaagaaagcattccaatcgctctt
accggaagcgatattttggctagagcaaaaaatggaactgggaaaactgctgccttttgc
attcccgccttagagaaaattgatcaagacaaaaacgttattcaagctgttattcttgtc
ccgacaagagagttggctcttcaaacatcgcaagtttgtaaagaactcgctaagcactta
caaattcaagtcatggttactaccggtggaactagcttaagggatgacatcatgcgtctc
catcaacccgttcatttactcgtcgggacacctggcagaattctggatctcgctagaaag
ggaatttgcatcttaaatgagtgcaatatgcttgtgatggacgaggctgataaacttttg
tcgccagagtttcaaccttcgatcgagcaattaattcgatttttatctgcaaaccgtcag
atacttatgttctctgccacattccctgttaccgtaaaagatttcaaagatcgatacctg
cgaaagccctacgtcatcaaccttatggacgaacttaccctcaagggtataacccagttt
tatgcttttgtcgaagaaagacaaaaagttcattgcctcaacactctcttttcgaagctt
caaataaaccaatcaattattttctgcaattccgtgaatcgagttgaacttcttgccaag
aaaatcacagagcttggctattcttgcttctatattcatgctaaaatgctccaagatcat
cgtaacagagtgtttcatgacttccgcaacggtgcctgcaggaatcttgtgtgcactgac
ttatttacaaggggtatagatattcaatctgtaaacgtcgtaatcaatttcgatttcccc
aagaatgcagaaacatatttacacagggtcggtcgatctgggaggtttgggcatcttgga
ttagccgtgaatttgatcacatacgaggaccgcttcaatttgtataggattgaacaagaa
ttagggacagaaatcaagcaaatccctccgcagatagatcaagctatttactgccaatga
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