Erythranthe guttata (spotted monkey flower): 105964752
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Entry
105964752 CDS
T07346
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105964752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105964752
03041 Spliceosome [BR:
egt03041
]
105964752
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105964752
Spliceosome [BR:
egt03041
]
Complex B
Other components
Prp19-related factors
105964752
Complex C
105964752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Mad3_BUB1_I
TPR_15
UTP6_C
TPR_19
NRDE-2
ARM_TT21
TPR_5
Motif
Other DBs
NCBI-GeneID:
105964752
NCBI-ProteinID:
XP_012844711
UniProt:
A0A022QUT7
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MSSIPEDLYPSEEDFLYEEEVLRNPNSFKLWWRYLIARSGSPFKKRSIIYERAVKALPGS
YKLWHAYLRERLEIVRNLPISHSQYQALNNTFERALATMHKMPRIWIMYLQVLTQQKLVT
KTRHTFDRALCALPVTQHDRIWEYYLVFVSQKGVPIETSLRVYRRYLKYDPSHIEDFIEF
LINSERWQETAERLSGVLNDGQFYSIKGKTKHRLWLELCDILTQHATEISGLNVDAIIRG
GIRKFTDEVGRLWTSLADYYIRRNLLEKARDIFEEGMTTVITVRDFSVIFDAYSQFEESM
LSIKMEGSNDSEDEVNEELEEEEELDDRLDIEKLTERISSFWFKDEHDVDLRLARLEYLM
DRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMKAVGKPHSLW
VAFAKLYESHNDVSNARVIFDKAVQVGYKAVDHLASVWCEWAEMELRHKNFKGALELMRR
ATAEPSAEVKRRVAVDGNEPVQMKVHKSLRLWTFYVDLEESLGTLDSTRAVYERILDLRI
ATPQIIINYAMLLEDNKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKSKLER
ARELFEHAVEMAPAESVKQLYLQYAKLEEDFGLAKRAMRVYDQATKAVPANEKLGMYEIY
ISRAAEIFGVPKTREIYEQAIESGLPDKDVKTMCVKYAELEKSLGEIDRGRALYKHASQF
ADPRSDPDFWESWNNFEVQHGNVDTFREMLRVKRSVSASYSQTHFILPEYLMQKDQLQTL
EEAKDVLKKAGVGDDEMEALERRLLPPSGGGELAVKESGGRKRVGFVSAGTQQKDGGEDE
TGNREEIELPDDESDDDDEDNPTVEIAQKEIPSAVFGGLARKRDELEKDAEENKDSDEQL
GALERIKRMRRAKE
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaattccggaagatttatatcccagtgaagaagatttcctctacgaagaggaa
gttcttcggaaccctaatagcttcaagctatggtggcgttacctgatcgcccggagtgga
tcaccgttcaaaaagagatcaattatctacgagcgcgccgtcaaagctttgcccggaagc
tacaagctttggcacgcctacctccgcgagcgtctcgagattgtgaggaacctgcccatc
tcccactcgcagtaccaggccctgaacaacaccttcgagcgagctctggccactatgcac
aagatgccccggatttggataatgtacctccaggtgctgactcagcagaagctcgttacc
aagacacggcacacgttcgaccgtgctttgtgcgcgttgcctgttacccagcatgaccgg
atttgggagtattatctggttttcgtttcgcagaagggtgttccgatcgagacctcgttg
agagtgtacagaaggtatttgaagtatgacccgagtcacattgaggactttatcgaattt
ttgataaattccgagcggtggcaggagacagccgagaggctttcgggcgttttgaacgac
ggtcagttttactccataaaggggaagacgaagcaccggctgtggttagaattgtgcgat
atattgactcagcacgcgacggaaatttctggattgaatgtggatgccatcattagaggt
ggcattaggaagttcactgatgaagttggtaggctgtggacctcgttggctgattattac
ataaggaggaatttgttggagaaggccagagacatattcgaagaagggatgaccacagtg
ataactgtgagggattttagtgtgatatttgatgcgtattcgcagtttgaggagagtatg
ttgtctattaaaatggagggttcgaatgatagcgaagacgaggttaatgaggagttggag
gaggaagaagagttggatgatagattggatatagagaagttgacggagagaatcagcagt
ttttggtttaaggatgaacatgatgttgatttgagattagcgaggttggagtatttgatg
gataggaggccagagttggcaaacagtgtgcttttgaggcagaatccgcataatgtagag
cagtggcataggagggttaagcttttcgaagggaatcccacgaagcaaattttgacctac
acggaagctgtgaggacagtggaccccatgaaggctgtgggtaaaccacactctctgtgg
gttgcatttgcgaagctgtacgaaagccacaacgatgtttcgaatgcgagggtgatattt
gataaggctgtgcaggttggttataaggcggtggaccatctagctagtgtgtggtgtgaa
tgggcggagatggagcttaggcacaagaattttaagggtgcattggaactgatgcgtcgt
gctactgcagagccatcagctgaggttaagaggagagtggctgttgatggcaatgaaccg
gttcaaatgaaggttcacaaatcacttaggctttggacgttttatgttgatttggaggag
agcctgggcaccctggattcaactcgtgcagtttacgagagaatattggatttaagaata
gccactccccaaattataataaactacgcaatgcttttggaagataacaagtactttgaa
gatgcatttaaagtttatgagagaggtgtgaagatatttaagtacccacacgtaaaagat
atctgggtcacttatctttccaagtttgtcaagagatatggaaagtcaaagctggaacga
gctcgagagttatttgagcatgctgttgaaatggcccctgcagaatccgtcaaacagtta
tacctccaatacgcgaagctagaagaagacttcggtcttgcaaaaagggccatgagagtg
tacgatcaggctacaaaagctgtcccagctaacgagaaattaggcatgtacgaaatatac
atttccagggcagcagaaatatttggtgtgcccaaaactcgagaaatttacgagcaagct
atagaatctggcctgccagacaaagatgtcaaaaccatgtgcgttaaatacgccgaactc
gaaaaaagcctcggtgaaattgaccgtggccgagcattgtacaagcatgcttcccaattt
gccgaccctagatccgaccctgatttctgggaaagttggaacaacttcgaggttcagcac
ggaaatgtagatactttccgagagatgcttcgtgttaaaaggagtgtttccgctagttac
agccagacgcactttatcctgccggagtatttgatgcaaaaggatcagttacagacactt
gaggaagctaaggatgtattaaagaaagccggtgtgggtgatgatgaaatggaggcactg
gagaggcggttgctaccacccagtggcggcggtgaactggcggtgaaagagagcggcggc
agaaaaagagtaggtttcgtgagtgctggtactcaacagaaggatggaggagaagacgag
acaggaaatcgggaggagattgagcttccggatgatgaatctgatgatgatgatgaagat
aatccgacggtcgagattgctcagaaggaaatcccgtcggctgttttcgggggattagca
aggaaaagagatgaattggagaaagatgctgaagagaacaaagacagtgatgaacaactt
ggtgcactggagaggatcaaaagaatgaggcgtgcaaaagaatga
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integrated database retrieval system
