Erythranthe guttata (spotted monkey flower): 105966467
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Entry
105966467 CDS
T07346
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52C-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105966467
03041 Spliceosome [BR:
egt03041
]
105966467
03036 Chromosome and associated proteins [BR:
egt03036
]
105966467
Enzymes [BR:
egt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105966467
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105966467
mRNA cycle factors
Common to processing body (P body) and stress granule
105966467
Spliceosome [BR:
egt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105966467
Chromosome and associated proteins [BR:
egt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105966467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
105966467
NCBI-ProteinID:
XP_012846477
UniProt:
A0A022QR77
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MSSPPWFSHSSSAGSTRRPRSTYLPPHLRTQPKITVTIPPPPYPKPAGPFDISEKFDELE
VTEEEEEEALEENIIKTKKVGPGPEVEASGVDIPPAVTSFDEMGFATKALGDNVRRCKYV
NPTPIQKYAIPVGMAGRDLMACAQTGSGKTAAFCFPIINSILLHKNNNTITGIGSRGSSA
TAFPMALILAPTRELASQIHEEAKKFSYQTGVKVVVAYGGAPIVLQLQNLEKGVDILVAT
PGRLVDLIERRRVSLRNVKYLALDEADRMLDMGFERQIRMIVQQMHMPPPGSRQTMLFSA
TFPDQIQRLASDFLSNFIFLAAGKVGSSTDLIVQKVEFVADMDKRDYLVNLLRSQRTNNT
TPQNNALTLVFVETKRGADSLERWLCSKGFPSTAIHGDKIQMERERALKLFRSGRTPILV
ATDVAARGLDIPHVAHVINYDLPRAVDDYVHRIGRTGRAGKSGLATAFFSDKNAPLAKPL
AQLMHQANQEVPLWLDQYANNNNSNTSSQSHYGKYAAPDYSYNDNYALPDSSYVDPTYAS
SYAPYDVAPYDAPAAYYGYNYDGPITATGWD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcctccatggttcagccattcaagcagcgccgggtcaacacgccgcccacga
tccacttacctccccccgcacctccgtacacagcctaagatcacggtcaccattccgccg
ccgccgtacccgaaacctgctgggccatttgatatctcagagaaattcgacgagctggag
gtcacggaagaagaagaagaagaagcactggaagagaatattattaaaacgaagaaagtg
gggccagggccagaggtggaggcgagtggggttgacataccgccagcagtgacgtcattt
gatgaaatggggttcgctacgaaggcgttgggagataatgtgaggaggtgcaagtacgtg
aacccaacacccatacagaagtacgctattccggtgggcatggccggtagggatttgatg
gcgtgtgcacagactggttctggtaaaacggcagccttctgcttccccattatcaatagc
attttgcttcataagaataataatactattactggcattgggagcaggggtagtagtgct
acggctttccccatggctctcattcttgctcctacacgagagctcgcttctcagattcac
gaggaagcaaagaagttttcgtatcagactggtgtcaaagttgtcgttgcttatggtggg
gctcctattgttctacagttgcaaaatctggagaagggtgtagacatattggtggcaaca
ccaggtcggttggtggacttgattgaaagaagaagagtttcccttaggaatgttaagtat
ttggcacttgacgaggctgaccgaatgttggatatgggctttgaacgccaaattcgtatg
attgttcagcaaatgcacatgcctcctcctggttctaggcagactatgctttttagtgct
acttttcctgatcaaatacagaggcttgcatcggattttctctcaaacttcatatttctt
gctgctggaaaggtgggctcaagtactgatctgattgttcaaaaagttgaatttgttgct
gacatggacaaacgtgactatttggtcaatcttcttcgttcccaaaggacaaataacacc
acccctcagaacaatgctttgaccctagtctttgtggagacaaagagaggagcagactca
ctcgagcgctggttgtgcagcaaaggttttccctcaactgccattcatggcgacaaaata
caaatggagagagagagagcgctgaaattgttcagaagcggacgcactccaattctagtg
gcgacagatgtggctgcacgtgggcttgacattcctcacgtcgctcatgtcataaattac
gacttgcccagagctgttgatgactatgttcacaggataggaaggactggccgtgctggt
aaatctggtttggcaactgcatttttcagtgacaagaatgcccctcttgctaagccgctt
gcccagctcatgcaccaagctaaccaggaagttcctctgtggctcgatcaatatgccaat
aacaacaacagcaacacatcatcccaatcccattatggtaaatatgctgcaccagattat
tcttacaatgacaactatgccctcccggactcatcatatgtggacccgacatatgcttct
tcttatgctccttatgatgttgctccgtatgatgcacctgctgcgtactatggctataac
tatgatggtcctatcactgcaaccggctgggactag
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