Erythranthe guttata (spotted monkey flower): 105967223
Help
Entry
105967223 CDS
T07346
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105967223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105967223
Enzymes [BR:
egt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
105967223
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
105967223
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
nSTAND3
CbiA
AAA_22
FtsK_SpoIIIE
DUF1611
ATP_bind_1
SRPRB
AAA_29
Motif
Other DBs
NCBI-GeneID:
105967223
NCBI-ProteinID:
XP_012847275
UniProt:
A0A022QKV3
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MAYGGPALAPTAPPSGSKTVRQVKLDKECELRVEVSPDSPLRLRVLNGTAEIYGTEIPPE
IWLNFPPRLKFAVFTWYGATIEIDGTTETDYTADETPMISYVNVHAVLDARRNRARASPS
DSDDSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCISATP
IELPIDPVEGIPLDMPLVYFHGHVTPSANVELYKVLVKELSQTLEKQFTGNVESRAAGMV
INTMGWIEGVGYELLLHAIDTLNATVVLVLGQEKLWSMLKDVLKNKANVDVVKLQKSGGV
VSRNAKVRQKSRAFRIREYFYGLANDLSPHSNIVSFSDLYIYRVGGGPQAPRSALPVGAE
PAADPTRLIPVTVNQDLLHLVLAVSFAKEPDEIISSNVAGFIWITDINFESKKITYLAPS
AGNLPGKYLIMGSLTWYEP
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcttatggcggccccgcccttgctccgacggcgccaccgagtggctctaaaacagtt
aggcaggtgaagctggacaaagaatgtgaattgagagttgaagtcagtcctgattccccg
cttcgcctccgcgtgctcaacggtaccgccgagatttatggaaccgaaattccgccggag
atttggttgaattttcctccccggctcaaatttgctgtttttacttggtatggtgcaaca
attgaaatcgatggtacaacagaaactgattatacagcagacgagacacccatgatcagc
tatgtcaatgtacatgctgtgctcgatgctagaagaaatcgcgccagagcttcaccgagt
gattctgatgattctcagggaccaagggttattgttgtgggacctactgattctggaaag
agtacgttgtcaaggatgcttcttagttgggcagctaaacagggatggaaacctactttt
gtagatttagacattggccaaggatctataacgatacctggatgcatatccgctacaccg
atagaactgcctattgaccccgtcgaaggaattcctcttgatatgcctctagtttacttc
catggccatgtcactcctagtgccaatgtagaactttacaaggtgttggttaaggagcta
tctcaaactctggaaaagcagtttacaggaaatgttgaatctagagctgcgggcatggtc
attaatacaatggggtggattgaaggtgttggttatgagctgctgctgcatgcaattgac
acgttgaatgccacagttgttcttgttttgggtcaggaaaaactttggagcatgcttaaa
gatgttctgaaaaacaaagctaacgtagatgtggtgaaacttcagaaatcgggtggtgtt
gtctctaggaatgccaaagtccggcagaagtccagagcctttagaatacgtgaatatttc
tatggactagcaaatgacctttcgccacattctaacatcgtaagtttcagtgacttgtac
atttatcgagtgggtggtggaccccaggccccacgctctgctctgccagttggtgcagaa
ccggctgcagatcccacaagattgattccagttactgttaaccaagatttgttgcatcta
gttttagccgtctcgtttgctaaagaacctgatgaaattatttccagtaatgttgctggg
ttcatctggattaccgacatcaactttgaaagcaagaaaatcacatacctcgctccgtct
gccggaaatcttccgggtaagtatttgatcatgggtagcctcacatggtatgaaccttga
DBGET
integrated database retrieval system
