Erythranthe guttata (spotted monkey flower): 105967308
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Entry
105967308 CDS
T07346
Name
(RefSeq) pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105967308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105967308
03041 Spliceosome [BR:
egt03041
]
105967308
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105967308
Spliceosome [BR:
egt03041
]
Complex B
Other components
Prp19-related factors
105967308
Complex C
105967308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
Mad3_BUB1_I
TPR_19
UTP6_C
ARM_TT21
TPR_5
Motif
Other DBs
NCBI-GeneID:
105967308
NCBI-ProteinID:
XP_012847363
UniProt:
A0A022QK02
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MSIAGSYKRWHADLRERLDTVRGLPITHSQYETVNNTFERALATMHKMPRIWIMYLQVLT
QQKLVTKTRHAFDRALRALPVTQHGRIWEYYLVFVSQKGVPIETSLGVHRRCLMYDPSHI
EDLIEFSINSELWQETAERLSGVLNDGQFYSIKGKTKHRLWLELCDILTQHASEISGLNV
DAIIRGGIRKFTDEVGWLWTSLADYYIRRRLFEKARDIFEEGMNTVITVRDFSVVFDAYS
QFEESMLSKKMETLGVIEDGVNEKEEEDDERFELENLKKTIDSFWFNDDNDVDLRLARLE
YLMDRRPELANSVLLRQNPYNVEQWHRRVRLFEGNPTKQILTYTEAVRTVDPTKAVGKPH
TLWVAFAKLYESHNDVSNARVIFDKAVQVGYKAVDHLASVWCEWAEMELRHKNFKGALEL
MRRATAEPSDEVKRSVAVDGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILD
LRIATPQVIINYAMLLEDNKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKSK
LERARELFEHAVEMAPAESVKQLYLQYAKLEEDFGLAKRAMRVYDQATKAVPANEKLGMY
EIYISRAAEIFGVPKTREIYEQAIESGLPDKDVKTMCVKYAELEKSLGEIDRGRALFKQA
SQFSDPRSDPDFWKKWQEFEFQHGNEDTVTEMFRVKRSISASYSQTHFMLPEYVLQKDQL
RALEEAKDVLKKAGVGFEMEALERRLSPPSGGGELAVKESGGRKRVGFVSAGSIQQKDGG
EKETGNREEIKLPEDESDDDPTVEIDQKEIPSAVFGGLARKRDELEKDAVDDEENKDIGA
LERIKRMRHLPF
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgccggaagctacaaacggtggcacgccgatctccgggaacgcctcgatacg
gtaaggggtttaccgatcacacactcgcaatacgagacagtgaacaacaccttcgagcga
gctctggccacgatgcacaagatgccccgtatttggattatgtacctccaggtgctgact
cagcagaagctcgttaccaagacgcgccacgcgttcgaccgcgcgttgcgcgcgctcccc
gtcactcagcacggccgtatttgggagtactatctggttttcgtttcgcagaagggcgtt
ccgatcgaaacctctttgggagtgcacagaaggtgtttgatgtatgacccgagtcacatt
gaggacttgatcgagttctcgatcaattccgagctgtggcaggagacagccgagaggctt
tcgggcgtcttgaacgacggccagttttactccataaagggaaagacgaagcaccggctg
tggttagaattgtgcgatatattgacgcagcacgctagtgaaatttctggattgaacgtg
gatgccataattagaggcggcattagaaaattcaccgacgaagttggttggttgtggaca
tcgttagccgattattacataaggaggcgtttgtttgagaaggcgagagacatatttgaa
gaagggatgaacacagtgataactgtgagggattttagtgttgtatttgatgcatattca
cagtttgaggagagtatgttgtctaaaaagatggagactttgggtgttatcgaagacggg
gttaatgagaaggaagaggaagatgacgagaggttcgaattagagaatttgaagaagacg
attgatagtttttggtttaacgatgataatgatgttgatttgagattggcaagattggag
tatttgatggataggaggccagagttggcaaacagtgttcttctgaggcagaatccttac
aatgtagagcagtggcataggagggttaggcttttcgaagggaatcccacgaagcaaatt
ttgacctacacggaagctgtgaggacggtggaccccacgaaggctgtgggtaaaccacac
actctgtgggttgcgtttgccaagctgtacgaaagccacaacgatgtttcgaatgcgaga
gtgatatttgataaggctgtgcaggttggttataaggcggtggaccatctagctagtgtg
tggtgtgaatgggcggagatggagcttaggcacaagaatttcaagggtgcgttggaactg
atgcgtcgtgctactgcagagccatcagatgaggttaagaggagtgtggctgttgatggc
aatgaaccggtgcaaatgaagcttcacaaatctctaaggctttggacgttttacgttgat
ttggaggagagcctgggtaacctggagtcaacgcgtgcggtttacgagagaatattggat
ttgagaatagccactccccaagttataataaactacgcaatgcttttggaagataacaag
tactttgaagatgcatttaaagtttacgagagaggtgtgaagatatttaagtacccacac
gtgaaagatatttgggtcacttatctttccaagtttgtcaagagatatggaaagtcaaag
ctggaacgagctcgagagttatttgagcatgccgttgaaatggcccctgcagaatctgtc
aaacagttatacctccaatacgcgaagctagaagaagactttggtctggcaaaaagggcg
atgagagtatacgatcaggccacaaaagcagtcccagctaacgagaaattaggcatgtac
gaaatatacatttccagagcagcagaaatattcggtgtgcccaaaactcgagaaatttac
gagcaagcaatagaatctggcctgcctgacaaggatgtgaaaaccatgtgcgttaaatac
gccgaactagaaaagagccttggcgaaatcgaccgtggccgagcattattcaagcaggct
tcccaattctccgatcctagatccgaccctgatttttggaagaagtggcaggagtttgag
tttcagcacggaaacgaagataccgtcacagagatgttccgagtcaaaagaagcatttca
gctagttacagccagacgcactttatgctgccggagtatgtgctgcaaaaggatcagttg
cgggcactagaggaagcgaaggatgtgttaaagaaagctggtgtgggttttgaaatggag
gcactcgagaggagattgtcaccaccaagtggcggcggtgaactggcggtgaaagagagc
ggcggtagaaaacgagtcggttttgtgagtgctggtagtattcaacagaaggatggagga
gaaaaagagacgggaaatagggaggagattaagcttccggaagatgaatctgatgatgat
ccgacggttgagattgatcagaaggaaatcccgtcggcggtttttggcggattagcaagg
aaaagagatgaattggagaaagatgctgttgatgatgaagaaaacaaagacatcggtgca
cttgagagaatcaaaagaatgaggcatttaccattttag
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