Erythranthe guttata (spotted monkey flower): 105968741
Help
Entry
105968741 CDS
T07346
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105968741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egt03041
]
105968741
Enzymes [BR:
egt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105968741
Spliceosome [BR:
egt03041
]
Complex C
Other components
Step II factors
105968741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
AAA_30
Cas3-like_C_2
nSTAND3
AAA_16
TsaE
Flavi_DEAD
ABC_tran
Sigma54_activ_2
PhoH
Motif
Other DBs
NCBI-GeneID:
105968741
NCBI-ProteinID:
XP_012848856
UniProt:
A0A022QI78
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MGAEIETDGLKKLEYLSLVSKVCSELENHLGCGNKTLAEFITDMGQNCETVDEFDAKLKE
NGAEMPDYFVRTLLTIIHAILPPKPKPKSDKGSKKEGESSAALSIKDGKERVKELEREIE
EEAKNRRRLEKDDDGEQIRDRVRVRDGDRRDGRRDRDRDDRGRERYGEREERVRNRDREE
RGRNNDRDGGYSDDRDRRKHGDRGEDWRNGYEEERDDERKGKRKEKSNVSGEPELYQIYK
GRVSRVMDKGCFVQFNDFRGKEGLVHVSQMATRRISNAKDVVKRDQEVYVKVISMSGSNL
SLSMRDVDQNSGKDLLPLKRGDGDDGLTANPSGRNDGGGMGSRIGLSGIRITEESDAVPS
RRPLKRMSSPEIWEAKQLIASGVMSVKDYPMFDEDGDGMLYQEEGAEEELEVELNEDEPA
FLQGQTRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNR
PWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKALTFGQRSKLSLQEQRQSLPIY
KLKKELVQACHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAK
RVAEEFGCRLGEEVGYAIRFEDCTSPETVIKYMTDGMLLREILIDEDLSQYSVIMLDEAH
ERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILY
TKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDYACQCLYERMKGLDKSVPELI
ILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPK
QGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAFHNEMSPTSIPEIQRINLGMT
TLNLKAMGINNLMAFDFMDPPSPQALLSAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPP
LSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAV
YEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFSKIRKAIA
AGFFFHSARKDPQEGYRTIVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVI
DPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgggggcagaaatcgaaaccgatgggctgaagaaactagagtatctctctcttgtttcc
aaagtgtgttccgagttagaaaaccatctcggatgtggcaacaaaactttggccgagttc
atcacggatatgggtcagaattgcgaaaccgttgatgagttcgatgctaaattgaaggag
aacggagctgagatgccggattatttcgtacggacgctgctcacgattatccacgcaata
ttgccgcccaagccgaagccgaaatccgacaaggggtcgaagaaggagggagaaagttcc
gccgctctttcgatcaaggatgggaaggagagggtgaaggaattggagagggagattgaa
gaggaagccaaaaaccggaggcggttggagaaagacgacgatggggaacagatcagggat
agagttagggttagggatggtgaccgtagagatgggagaagggatagagatagagatgac
aggggaagagagagatatggggagagagaggaaagggttcgaaacagggatagggaggaa
cggggcagaaacaacgatagagatggtggttatagtgatgatagagataggagaaaacat
ggtgacaggggggaggattggaggaatggatacgaggaagagagagatgatgagaggaaa
ggaaagaggaaggagaaaagtaatgtttctggggaaccggaattgtaccaaatctacaag
ggaagggtttcgagggttatggacaagggttgttttgttcagtttaatgattttagaggg
aaagaggggcttgtgcatgtctctcagatggcgactaggaggatttcgaatgctaaggat
gtagtgaagcgggaccaggaggtgtacgtgaaggtcatctccatgagtgggagtaatttg
agtttatcgatgagggatgtggatcagaacagtgggaaggatttgttgcccttgaagagg
ggtgatggggatgatggtttgactgcgaatccttcgggtaggaatgatggtggagggatg
gggagtaggattggtctgtcgggaattaggatcacagaggaaagcgatgctgtgccttca
cgaaggccgctaaagcgaatgagctcgcccgagatatgggaggcgaagcagttgatagct
tctggagttatgagtgtaaaggattatcctatgtttgatgaagatggagatggcatgctt
tatcaggaggaaggagcggaagaggagctcgaagttgagttaaatgaggatgaacctgct
ttcttgcaggggcaaactaggtattctattgacatgtcacccgtgaagatattcaagaat
ccagagggatctttgagccgtgcagcagctctgcaatcggctttgataaaggagaggagg
gaagttagggaacaacagcaacggacaatgctggattcgattccaaaggatctgaatcgt
ccttgggaagatccaatgccagaaacaggtgaaaggcatctagctcaggaattgagaggt
gttgggttgtccgcgtacgacatgccggagtggaagaaagatgcgtatggtaaagcgcta
acttttggacaaagatcgaagctttcacttcaggaacagaggcaaagtctgcccatctac
aagttgaagaaggaacttgttcaggcctgtcacgataatcaggtcctggttgtgattggt
gaaacggggtcaggcaaaactacacaggtgacacagtatctggccgaggcagggtacact
actaggggcaaaataggatgtacgcagcctcgtagggtggctgcaatgtctgttgcaaag
agagttgctgaagaattcggttgtcgtttaggcgaagaagtgggatatgcaattcgtttc
gaggattgcactagtccggagactgtgatcaagtacatgacagatggaatgcttctgagg
gagattctgatcgacgaagatttgtctcagtattcggtgataatgctcgacgaagctcac
gagaggactattcacacggatgtactcttcggattgttgaagcagctcgtgaagcggaga
cctgaccttcgtctgattgtcacgtccgcaactttggatgcagagaagttttcgggttat
tttttcaactgcaacatcttcacgattccgggaagaacttttcctgtggaaatactctac
acgaagcagcccgagagtgactatctcgatgcatctctgatcaccgtgttgcagattcac
ttgactgaacccgagggagatattcttctctttttgaccggccaagaagagattgattac
gcatgtcagtgcttatacgagaggatgaagggtttagataaaagtgtgcctgagctgatt
atcttgcctgtgtacagtgccttgcccagtgagatgcagtcgaggattttcgatcctgcg
cctccaggaaaaagaaaagtagttgttgctactaatattgctgaagcttctttgaccatc
gatggaatattctacgttattgatcctggttttgcaaagcagaatgtgtataatcctaaa
caagggctcgattctttggtgataactccaatatcacaagcatcggccaaacaaagggct
gggcgagctggacgtacaggaccagggaagtgctatcgcctctatacagagagtgcattc
cacaatgagatgtctccgacatctattccggaaatacagaggattaatctagggatgact
actcttaatctgaaagctatgggtatcaataatctaatggcttttgattttatggaccct
ccatcgcctcaggcacttctttctgctatggaacagctgtacagtttaggagcactggat
gaagaggggcttctcactaagttgggtaggaaaatggctgaattcccattggatcctcca
ctttcgaaaatgcttcttgcaagtgtagatcttggatgcagtgacgagattctgacaatt
attgcgatgattcaaaccggaaatatcttctaccgaccaagggagaaacaagcgcaggcg
gatcagaaaagggccaagtttttccagcctgaaggagaccatttgactctacttgctgtt
tacgaggcttggaaagcgaaaaatttctcaggtccgtggtgctttgagaattttgttcag
tcccgatcgttgagaagagcgcaggatgtaaggaagcaacttctatccatcatggacaag
tacaaattggatgtcgttagtgctggcaagaatttttcgaagattcgtaaagcaatagct
gcgggcttctttttccattctgcaagaaaggacccacaagaaggatacagaacaatagtc
gagaaccagccagtttacatacacccgagcagtgctctgttccaaagacaacccgattgg
gttatttaccacgagctggttatgacaactaaagagtatatgcgtgaagttacggttata
gaccccaagtggctcgttgagctggcaccacgtttcttcaaagtgtcggaccccacaaag
atgagtaaacgaaagaggcaagagcggattgagcccttgtatgaccgatatcacgagcct
aattcgtggcggttgagcaaaaggcgtgcttga
DBGET
integrated database retrieval system
