Erythranthe guttata (spotted monkey flower): 105969566
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Entry
105969566 CDS
T07346
Name
(RefSeq) protein RST1 isoform X1
KO
K27498
focadhesin
Organism
egt
Erythranthe guttata (spotted monkey flower)
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105969566
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105969566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3730
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
105969566
NCBI-ProteinID:
XP_012849796
LinkDB
All DBs
Position
Unknown
AA seq
1865 aa
AA seq
DB search
MDSYTPLLDKTRLPQPSLQKLAVISIIHKFRSSPPSDAGRDVISRCLRSNSLAVADQSAR
ELCRLVKDSKLDITTGLLELQSALEDSSNPQFTCLFIKAIGLLTTLGFEENQSSFRFQLP
ENHPFVKVLSCGTEVQSVLVKQVIVFITKCKHLGMESVCEFLGPFLKFSIIKVPISNSIS
SSAFVRNLVSTMAAFCCSFPQEAIPVFKFLMGHLKYFPCKDAEEVINVYYVFECLVDAYQ
VVLRQLVGMGSLVHEAQLCGLALLEEMLSQFRDFRSCAGGVEKIVDAARNLLAVQKDLGL
SYCTGHSSVMLSLVPILTQSELEHEQYSILKLVLFLLRWKGENENHTGASSSILTEELLF
IFPVLALVSSPSRSIKQTTTDLLSILGKIATNLLIAPKEKQVAEGNHLSISTKQVVDESH
LSISTPGHIIFRFLRHMWFQDQSSLHGSFYVNLFCEGESFANEDHHGLKTWTSSVRKYYC
RIFGKQKSTSTITKSEEIFLTEMPPVLCAVASVTLLHQTGNSAIDLLAIGCNIEPKLGVP
VLLIILFYNHICSSSEKLNDSHDILLKLLGLLPSVASHPAMIPLILQILLPMLQKDVNPV
IKATAIRLICKTWEINDRVFGSLQGMLNPNGLVQYNAERGICISIAASIHDICKRNADRG
VDIILSVAACIENHDPLVQSLGLQSLAHLCEADVIDFYTAWAVIAKHMENYFQNPIVAYG
LSLLLRWGAMDAEAYPEAAENLLKILWDIGTHRERSLSSLWTRAREAAFTSLLQYEVLHV
QRSIPDFNIRNMDFIITETNLDLLTAVEEFEVRLMNYDHITRRRFVKQKKIFGSRNKIVK
LLDVVPEVIFGSGSNHRIKELPGAALLCLPAHKHVKNEGLLKGLQNVLAKYEDAAVEISG
SLQLSRNILLAILSLQSWKPFMQRWLRSCIMVLEANPNHIVPDKTLKASKDILKTLTRLA
EAAIPRSAENIALALGAFCLVLHGSAHAVKSMASEFLLKWLYQYEHEHRQWSAAMSLGLI
SCCLHVTDHELKFKIINALLEVASISKSTLVKGACGLGLGYSCQDLQTRFDSGVSTRSGK
ETYKIQETELLSKIIKTLVQMIYQFGGCSADIREKVESYFPSGTDNYSLADVELLDEDDV
WGISGPIIGLGNSLGAIYRAGAYDAVLYIKSLIISWIPSANISFSKFAVGETCLQMSSLG
ACLALPSVVYFCHRVELINDIELDHLISGFVNLISELLSVEPFDTFHQSLLMASCAGAGS
LLCINLNVGLHSLEVEHAKSLLALFRRTYSSPHPPFIHLGGMLGVVNAMGAGAGMLSQLF
PLSSLTTTSDQKDPSQVLGPLLSNNVLEAESTSLIQEIFLVAQNSEDPQSQQYASWAVSF
LRHFVFSRESANEESAVHDSGIPDPKSVAQEFSEDSIVMKLSVWLMQMNYSELGSSIKIA
TVAFALRCLSHAPRLPSLDWGAIIRKCMKYGSQVAEMPSKDIIAFRKGTLREECFLFLLS
HAKQSDSLLGYLDELYDLSRFKTLESNLQSLALLHLTDLMKTFSNLRIAKVFDDVAEFLH
WSVSSDQYDDEQKIMLRVSCWKGLQMCLNEFAALETQDYAYNFEHCMEILFTMLPWSRSG
VIVESYQKIPQLEWTEAIRCLGKARQSWLLSDLLSFLDVQFKEENNQIFNTLKKVFAKTA
LVRIGSIPVLELAKLKAYILNINSEVVWNILVEVTVTLQHSDESTRRQWLVDTAEILCVT
SYPSTTLRFLGLLSGSCCKYMPFLVADKLSVLSDLPVTLSSLLEGSGWGVAAESVASYFW
KSTVRIHDWARDVEGGDYIPGSQPIDSTEKEMANLLFRVMHQTCVSLKEYLPADKQLRLA
NMAVS
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggattcctacactccgctcttagataaaacccgtctcccccaaccctcactccagaaa
ctcgccgtgatctcaatcatccacaagttccgttcctcgccgccgtccgatgccggtcgt
gacgtcatcagccgctgtctccggtctaattccctcgccgttgccgaccagtctgcccgg
gaactatgccgcctcgtcaaggattcgaaattggatatcaccactgggttactggagtta
cagtccgcactcgaggactcctccaatcctcaattcacatgtttattcatcaaagccatt
ggactgctcaccacacttggtttcgaagaaaatcaatcttcgttccgttttcaattgcca
gagaatcatccattcgtcaaggtactttcctgtgggactgaagttcaatcggtgcttgtg
aaacaagtgatcgtattcatcacaaagtgtaaacatcttggaatggagtcagtctgtgaa
ttcttgggccctttcttgaaattttccattataaaagttcctatttcgaattccatttcc
agttctgcatttgtgaggaacttagtgtccacaatggcggcattctgctgctcgtttccc
caggaagccattcccgtatttaagtttctgatggggcatctcaaatatttcccatgtaag
gatgctgaagaggttataaatgtttattatgtatttgagtgcttggtggatgcgtatcag
gtggttttgaggcagttagttggaatgggatcgcttgtccatgaagctcaattgtgtggt
ttggcactgctggaggaaatgctatcgcaatttagggatttccgcagttgcgcaggtggg
gttgagaaaatcgtagatgcggcaagaaacttattggctgtccagaaagatcttggcctc
agttattgcactggccattcgtcggtgatgttatcgttggttccaattctgactcagtca
gagcttgaacacgaacaatattctatactgaaactggtcttgtttctcttgagatggaaa
ggtgaaaatgaaaaccacaccggtgcctcttcaagtatattgaccgaagagcttctgttc
atttttccggttcttgcacttgtttcctctccatccagatctattaaacaaactaccact
gatttactttctatattgggaaagattgctactaatttactgattgcaccaaaagaaaaa
caagtggcagaagggaatcatctgtcaatctctacaaaacaagtggtagacgagagtcac
ctgtcaatctctactcctggacacatcatttttaggtttctaagacatatgtggtttcag
gatcaatcgtcattgcatggttcattctacgtgaatcttttttgtgaaggggaatccttt
gccaatgaagatcatcatggactaaaaacatggacttcctccgtaaggaagtattattgt
agaatttttggaaagcaaaaatccacttctaccatcactaagtctgaagaaatatttcta
acagaaatgcctccggtactttgtgcagttgcaagtgtcaccctcttgcatcaaacggga
aactctgccatcgatctgttggctattggctgtaatattgaacctaagcttggtgttcct
gtgttgcttataattctattctacaatcatatatgctccagttcagaaaaacttaatgac
tctcatgatattcttctcaagcttttgggtttgcttccatcagtggcttcgcatcctgca
atgataccactgattcttcagattctcttgccaatgcttcagaaggatgtgaatcctgtc
ataaaagctactgctatacgcttgatttgtaagacctgggagatcaatgaccgtgtcttt
gggagtttacagggaatgttgaatccaaatggtttagtacagtacaatgccgaaagagga
atctgcatcagtatagcagcttctattcatgatatttgcaaaagaaatgctgatagaggg
gtggacattattttgtctgttgcggcttgcattgaaaatcacgatcctttggttcagtct
cttggattgcagagccttgcacatctttgtgaagctgatgttattgatttttacactgcc
tgggctgtgattgcaaagcatatggagaactactttcagaatcccattgttgcttatggg
ctgtctcttcttttgagatggggggcaatggatgctgaagcatatcctgaagcagctgaa
aatcttttaaaaatattgtgggatatcggaacccacagagaaagaagtctgagttctttg
tggacaagagctcgagaagctgcattcacaagtctattgcaatatgaggtgctgcatgtt
cagaggagcataccagatttcaatatcaggaacatggattttatcattactgagactaac
cttgatttgctgacagcagtggaagaatttgaagtcagactcatgaattatgatcacatt
acaagacgaagatttgtaaagcagaaaaagatctttggatctagaaacaagattgttaag
ttgttggatgttgtccctgaggttatttttggttcaggaagtaaccacaggattaaagaa
ttaccaggtgcagctttactctgccttcctgctcataaacatgtgaagaatgaaggactg
ttaaaaggattacaaaatgtactcgctaaatatgaggatgcagctgtggagatatctggc
tctcttcagctgtcaagaaatattttgcttgccattctctctttgcagtcatggaaacct
ttcatgcaaagatggttgaggtcttgcatcatggtgctagaggcaaatccgaatcacatc
gtgccagacaaaactttgaaggcttctaaagatattttgaagactctaacaaggttagca
gaagccgcaattcctcgatctgctgagaacatcgctctagcactgggagctttttgtctg
gtactacatggatctgcacatgcagtcaagtcgatggcttcggagtttttgctaaaatgg
ttatatcagtatgagcatgaacatcgccagtggtcagcagcaatgtctcttgggttgatc
tcatgttgtctacatgtgactgatcatgagctcaagtttaaaattataaatgcactcctt
gaggtcgcatctattagcaagagcaccctcgtgaaaggagcttgtgggcttgggttaggt
tattcatgtcaagatcttcaaactagatttgattctggggttagtactcgatcaggaaaa
gaaacatataagatacaggaaaccgaactgttgagtaaaatcatcaagaccttagttcag
atgatatatcagttcggcggatgttcagctgatatccgggagaaggtagaatcgtatttt
ccttcaggaacagataattactccttagccgatgttgaacttcttgacgaggatgatgtg
tggggtatcagtggacctataattggcttagggaattctctcggagcaatatacagggct
ggggcttacgatgccgttctttatataaaatcactaatcatttcatggattcctagtgca
aatatctccttctcaaagttcgctgtaggtgaaacatgtttacagatgtcgtctttagga
gcatgccttgccttaccatctgtagtatatttctgccatagggtagaactgattaatgat
attgagttggaccatcttatcagtggctttgtgaacctcatctctgagctgttgtctgtt
gaaccatttgacacctttcaccagagcttgttgatggcatcttgtgctggggcgggcagc
ctcctctgtattaacttgaatgtggggttgcactctttagaagtcgaacatgctaaatct
ttgctagcattattcagaagaacttactcgagtcctcacccgccatttattcatctagga
ggaatgcttggtgttgtaaatgcgatgggggctggtgcagggatgctgagtcaactcttc
cctttatcctcattgaccaccacatctgatcaaaaggatccatctcaagtcttgggtcct
ctactttcgaataatgttctggaggctgagtccacatcacttattcaagagatatttctt
gttgcacaaaactctgaggatcctcaatcacaacaatatgcatcatgggcagtttctttt
ctcaggcattttgttttctctagagaatctgctaatgaggagagtgctgtacatgactct
ggtatccctgacccgaagtctgtcgctcaggaattttccgaagacagcattgtcatgaaa
ctttctgtgtggcttatgcagatgaattattctgagcttggtagcagtataaaaattgca
acagttgcttttgctctgcgatgcctatcacatgctccaagattaccctcattggactgg
ggagcaatcatcagaaaatgcatgaaatatggtagtcaagtggctgaaatgccttcgaaa
gatataatagccttcagaaaaggaactctaagggaggaatgctttctattcttgttatct
catgccaagcaatctgattcacttcttggctaccttgacgaactatatgacctgtcaagg
ttcaagacgctcgaatcaaacctgcaatcactagcactcttgcacctgacggacctgatg
aagacattctccaatttaagaattgccaaggtttttgatgatgtggccgaattcttacat
tggtctgtttcttctgatcaatacgatgatgaacagaaaataatgttgcgggtttcatgc
tggaagggtctgcagatgtgtttaaatgaatttgctgccctcgagacacaagattatgca
tataactttgaacattgtatggaaattctgtttacaatgttgccttggtctcggtcaggt
gttattgtagagtcatatcagaagattccccaattggaatggactgaagcaattagatgt
cttggaaaggctcgacaaagctggctactatcagatcttttgtcgtttttagatgttcaa
ttcaaagaagagaacaaccaaatcttcaatactctgaaaaaggttttcgctaaaactgca
ctggttcgaatcggctcaattccagtgttggaacttgccaaattgaaagcctatattttg
aacatcaattcagaagttgtctggaacattctggtagaagtcaccgtaactttgcaacac
agtgatgagagcactagaagacaatggcttgttgacacagcggaaatcttgtgtgtgaca
agttacccttcaacgactctgcggtttctaggcctgttatctggcagctgctgcaaatac
atgccatttttggtggcagataagttaagtgtgttgagtgacctgcctgtcactctatca
tctctccttgagggcagtgggtggggggtagctgcagaatctgtagcatcgtacttttgg
aaatcgacggtccggattcatgattgggccagagatgtagaaggtggtgattacatacct
ggctcacaacctattgacagcactgagaaagaaatggcgaacttgttatttcgagtgatg
catcagacctgtgtgtcgttgaaggaatatttgcctgcggataaacagctgagacttgct
aatatggctgtctcgtga
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