Erythranthe guttata (spotted monkey flower): 105970956
Help
Entry
105970956 CDS
T07346
Name
(RefSeq) protein HUA ENHANCER 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105970956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105970956
03041 Spliceosome [BR:
egt03041
]
105970956
03009 Ribosome biogenesis [BR:
egt03009
]
105970956
03016 Transfer RNA biogenesis [BR:
egt03016
]
105970956
Enzymes [BR:
egt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105970956
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
105970956
Spliceosome [BR:
egt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105970956
Complex C
U4/U6.U5 tri-SnRNP related factors
105970956
Ribosome biogenesis [BR:
egt03009
]
Eukaryotic type
Pre-60S particles
Helicases
105970956
Transfer RNA biogenesis [BR:
egt03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
105970956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
nSTAND3
ATPase_2
Motif
Other DBs
NCBI-GeneID:
105970956
NCBI-ProteinID:
XP_012851247
UniProt:
A0A022QEQ0
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MDEYTTPLKRKQLEENSENKHDVPVQDSGSKRRTLARTCVHEVAVPSGYDSNKDELIHGT
LADPVYNGERAKTYQFKLDPFQEVSVSCLERNESVLVSAHTSAGKTAVAEYAIAMSFRDK
QRVIYTSPLKALSNQKYRELSQEFSDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV
LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNIHKQ
PCHVVYTDFRPTPLQHYMFPMGGSGLYLVVDENEQFKEDNFSKLQDTFTKKNTSNNGNKS
ANSKSGGRIAKGGNASAGSDIYKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLDFNT
QEEKDIVEQVFKNGILCLNEEDRNLPAIELMLPLLQRGIAVHHSGLLPIIKELVELLFQE
GLVKALFATETFAMGLNMPAKTVVFTSVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG
ICIIMIDDKMEMNTLKDMVLGRPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQ
FQYEKTLPDMGRKVSELEEEAAVLDASGEAQVTEYHRLKLEMAQLEKKMMAEITQPERVL
SFLQPGRLVKVREGGTDWGWGVVVNVVKKPPAPSSSLPASMASSRGNSYIVDALLHCSLG
SSENGSQPKPCPPSPGEKGEMHVVPVQLPLLSALSKLKISVPNDLRPIEARQSILLAVQE
LEKRFPQGLPKLDPVKDMGIDDPEFVKLADQTEELEQKLFSHPLHKSQDDNQIKSFQRKA
EVNHEIQQLKSKMRDSQLQKFRDELKNRSRVLKRLGHIDGDGVVQLKGRAACLIDTGDEL
LVTELMFNGTFNDLDHHQVAALASCFIPGDRSGEQIHLRAELAKPLQQLQESARKIAEIQ
RECKLEINVDEYVEASIRPYLMDVIYCWSKGASFADVIQMTDIFEGSIIRLARRLDEFLN
QLKAAAHAVGEADLEEKFGAATESLRRGIMFANSLYL
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtatactactcctctgaaacggaaacaactggaagagaattcagagaacaaa
catgatgttcctgttcaagattctggctctaagaggcgtaccttagctcggacatgtgtg
cacgaggtggccgttccaagtggatacgactcaaacaaggatgaattaattcacggtacc
ctagcagaccctgtttataatggggaaagagcaaaaacctaccaatttaagctcgatccc
tttcaggaggtttctgtgtcttgtttggaaagaaatgagtctgttttagtttcagcacac
acttcagctggaaaaactgcagtggctgaatatgccattgccatgtcttttagagataaa
cagagggtcatatatacttctccattaaaggctctgagcaatcagaaatacagagagttg
agccaggagttttcagatgttggcttgatgacaggggatgtgacactttcccctaatgca
agttgtttggtaatgaccaccgagattctcagaggaatgctttataggggttcggaggtg
ttgaaggaagttgcttgggtcatatttgatgagatacattacatgaaggaccgtgaaaga
ggtgttgtttgggaagaaagtattatcttcttgcctcctgccattaagatggtttttctt
tcagcaacaatgtcgaatgccactgaatttgctgaatggatatgcaatatacataaacag
ccatgtcatgtagtctatacagattttaggcccacgccactgcaacactacatgttccct
atgggtgggtctggtttgtatcttgtagttgatgagaatgagcagtttaaggaggacaac
ttttccaaacttcaggatacttttacaaagaaaaatacgagtaataatgggaataagagt
gcaaattctaagtctggtggcagaattgcaaaaggcggaaatgcttctgctggttctgac
atatacaaaattgtcaagatgataatggaacgaaaattccagccagtcataatttttagt
tttagcagaagagagtgtgaacaacatgccatgtcgatgtccaagcttgatttcaatacc
caagaggagaaagacattgtggagcaagtgtttaaaaatggaatcctatgcttgaatgag
gaagatagaaacttgccagcaattgaattaatgttaccattgcttcagcgaggcattgct
gttcaccattctggcttgcttcctataatcaaagaacttgtggaacttctctttcaagaa
ggactggttaaggctctgtttgcaacagagacgtttgccatggggttgaacatgcctgca
aaaactgttgttttcacgagtgtcaaaaagtgggatggtgatagtcatcgttatattggt
tctggtgagtatattcagatgagtggcagagctggacgccgtggtaaagatgatcggggt
atttgcattataatgattgatgataaaatggagatgaatacccttaaagacatggttttg
ggtagaccagcacctctggtcagtactttccgtttaagctactactcaattctgaattta
atgagccgtgctgagggacaatttactgctgagcatgttatcagacattccttccaccag
ttccaatatgagaagactttaccggacatggggaggaaagtctcagagcttgaagaggaa
gctgctgtccttgatgcttctggagaggcccaggttactgaatatcatagactaaagctt
gaaatggcccaacttgaaaagaaaatgatggcagagataacgcagcctgaaagagttctc
tctttccttcaacctggtaggctggttaaggtcagggaaggtggaacagattggggttgg
ggagtcgtagtcaatgtggtgaaaaaacctccagctccatcaagttctttgccagcttca
atggcttcttcacgtggtaatagttacattgtggacgctctgcttcactgctctctagga
tcaagtgaaaatggttctcagccaaaaccttgtcctccaagtcctggagagaagggtgaa
atgcatgtggttcctgttcagttgcctcttctttctgcacttagtaagctcaaaatatct
gttcctaatgacttgcggccaattgaagctcgacaaagcattctcctagctgtgcaggag
cttgaaaaacgctttcctcaaggtcttccaaagcttgatccagtgaaggatatgggaatt
gatgatccagaattcgttaagttggcggaccaaacggaggaacttgaacaaaaattgttt
tctcacccactacataagtctcaggatgataatcagattaaaagtttccagagaaaagct
gaagtcaaccatgaaattcaacaactaaagtcaaagatgcgtgattctcagcttcaaaaa
tttcgtgatgaacttaagaatcggtcacgggttctcaagagactcggccatattgatggg
gatggtgttgttcagttaaaggggcgggctgcctgcctaatagatactggagatgagctt
ctcgtcacagaattgatgttcaatggtaccttcaatgatctcgatcaccatcaagtcgca
gctctggcaagttgctttatccctggagacagatcgggtgagcagatacatttgagagcc
gaacttgccaaaccattgcaacagcttcaagaaagtgcgagaaaaatagcagagatacaa
cgcgagtgtaagctcgaaataaatgtggatgaatatgttgaagcatcaattagaccgtac
ttgatggatgtgatttactgttggtcaaagggagcgtcttttgccgatgttatccagatg
accgatatttttgaaggtagcatcattcggctagctagaaggctcgatgaatttttaaac
cagttgaaagctgctgctcatgcagttggagaagctgatttagaggaaaagtttggagca
gctactgaaagccttcgtcgcggaataatgtttgcgaattcgttgtatctctaa
DBGET
integrated database retrieval system
