Erythranthe guttata (spotted monkey flower): 105971125
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Entry
105971125 CDS
T07346
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
egt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105971125
09123 Folding, sorting and degradation
03018 RNA degradation
105971125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105971125
03041 Spliceosome [BR:
egt03041
]
105971125
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105971125
mRNA degradation factors
5'-3' decay
Lsm complex
105971125
Spliceosome [BR:
egt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105971125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
M11L
DUF150_C
Motif
Other DBs
NCBI-GeneID:
105971125
NCBI-ProteinID:
XP_012851425
LinkDB
All DBs
Position
Unknown
AA seq
98 aa
AA seq
DB search
MATDAGLENLVDQIISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG
LYIIRGDNISIVGELDEELDASLDLSALRAHPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgatgctggactcgagaatctcgttgatcaaataatttcagttatcacaaat
gacgggcggaatattgtgggagttctgaaaggatttgaccaggctaccaacataatcctc
gacgaatctcatgagcgggtttactccaccaaggaaggtgtgcagcaacttgtcttgggg
ctttatatcatacgcggtgataacataagcatcgttggagaactagatgaagagctagat
gcaagtttggacttgtcggcgcttagagctcatcctttgaagccggttatccactga
DBGET
integrated database retrieval system
