Erythranthe guttata (spotted monkey flower): 105973190
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Entry
105973190 CDS
T07346
Name
(RefSeq) small RNA degrading nuclease 1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105973190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egt03009
]
105973190
Ribosome biogenesis [BR:
egt03009
]
Eukaryotic type
Pre-60S particles
RNases
105973190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
PMC2NT
FadA
Motif
Other DBs
NCBI-GeneID:
105973190
NCBI-ProteinID:
XP_012853667
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MEDLIASAKKEVLIEMVKLAQKRGMSGSKGTWKDFLKSYDSKFGSSLSDPARRSVESLHE
FLKSFTKDDDLRFFEKVLQCYSNRDEVEQIKKSSPDNETAEQKLVRLTYENPMYPVEYSF
PSYEDEWLTIKPRKKSKAMKSTEIIAIDCEMVLCEDGSEALVKVCAVDRNLQVKLDRVVN
PNKAIADYRTEITGISAEDLEGVTYSLKDVQKSLKKLLSHGAILAGHSLNNDLLAMKVDH
KRVIDTSYVFKYANMPINKKASLSLLCKAMLGYELRKTGSPHNCLDDACAAMKLVLALLE
GKIDEVIAEKFKEPEMAKLLVHRIPANFDSSDLKSIISGNFSIETKMDKIIKNSTYKAYA
IFKNYQEAFDAFDNLKGDLEKDSCGRPQKIVTFNLDSGLTGTLCVCKIYSEDYVGGKLTR
KRLIEDDASGETKKLKTDQNPEPVEERETHLKEIDRLKQELCETHLKEIERLKKELSERD
AQISILTKLNVALARKQGL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttaatcgcctccgcgaagaaagaggtattgattgaaatggttaaattggcg
caaaagagaggaatgtctggaagcaaaggtacctggaaagattttttgaaatcttatgat
agtaagttcgggtctagcttgagtgacccggcccggaggtctgttgagtccttgcatgaa
tttttgaagtctttcaccaaagatgatgatttgaggttctttgagaaagtattgcaatgt
tattccaaccgtgatgaggtggagcaaattaagaaaagctctcctgataatgaaactgcc
gaacagaaattagtccgcttgacttacgagaatcccatgtaccctgttgagtattcgttc
ccctcgtacgaagatgaatggttgactataaaaccccgtaaaaagtctaaggccatgaag
tctacggaaataattgctattgattgtgagatggttctctgtgaagatggcagtgaagct
ttggtgaaggtgtgcgctgtagaccgtaatttacaggttaaacttgatcgagttgtaaac
ccgaataaagcaattgcagattatcgaacggagataactggaatctctgcagaagattta
gagggagtgacatattctttgaaagatgtgcagaaatctttgaagaagttgttatcacat
ggtgccattttggctggccatagtctcaataacgatcttttagcaatgaaggtggaccac
aaaagagtgatcgacacatcttatgtcttcaagtatgcaaatatgccaatcaacaagaaa
gcttctctgagtttgttgtgtaaggctatgttaggttatgagctgaggaaaacaggaagt
ccgcacaactgtcttgatgatgcatgtgctgcaatgaagctcgtgttggccctattagag
ggaaaaattgacgaagtcatagctgaaaagtttaaagaaccggaaatggcaaagttgctt
gtacacagaatccccgccaattttgatagcagtgacttgaagagtattatttctgggaat
ttctctattgaaacgaagatggataaaataataaaaaattctacctacaaggcgtatgcg
atattcaaaaattatcaagaagcattcgatgcttttgataatcttaaaggtgacttggaa
aaggattcatgtgggcggccacaaaagattgtaacgtttaatcttgactcgggattaacc
ggcactctctgtgtttgtaaaatttactccgaggattatgttggaggaaaattgacgaga
aagaggttaattgaagacgatgcttctggtgaaacaaagaagttgaaaacagaccaaaat
ccggagccagttgaggaacgtgaaacgcatttgaaagagattgacaggttgaagcaagag
ctatgtgaaacacatttgaaagagattgaaagattgaagaaagagcttagtgaaagagac
gcgcaaatttcaatcttgaccaaattaaatgtcgcacttgctaggaaacaaggactctga
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