Erythranthe guttata (spotted monkey flower): 105973287
Help
Entry
105973287 CDS
T07346
Name
(RefSeq) histone deacetylase 6-like
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
egt01009
]
105973287
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105973287
04131 Membrane trafficking [BR:
egt04131
]
105973287
03036 Chromosome and associated proteins [BR:
egt03036
]
105973287
Enzymes [BR:
egt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105973287
Protein phosphatases and associated proteins [BR:
egt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105973287
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
105973287
Membrane trafficking [BR:
egt04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
105973287
Chromosome and associated proteins [BR:
egt03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
105973287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
DUF7491
BMFP
APG6_N
FapA
CC4_CEP85
PPP1R21_C
Motif
Other DBs
NCBI-GeneID:
105973287
NCBI-ProteinID:
XP_012853763
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MGFCLYNNIAIAASFLLNRRPKLGVGKILIVDWDVHHGNGTQKMFYEDPRVLTFSVHRHD
SGEFYPYGNDGSYSMIGEGAGAGYNINVPWENDLCGDADYFAVWDHILIPVARKFNPDLI
MVAAGFDAALGDPLGGCCLSPYAYSVMLRKLMDISRGKNIVLALEGGYNLVSLAKSAQAC
VEVLLQDKPLTRSSVDLPLKSTALVIRTVRQAVSRYWPVLASELTDQVINSSRRPSSQTE
DVADTSTSSAMTNSKGEQVCSAERKNDKKKNVADLRMKRMFRDSKSAARPSAPESGFQAS
DFQRPLAVESDKRLPEESVSKSKTARKNVGPTCLRGGLRIEDSDPPQQSSALVVASSSLP
PTTEETSEKESSSKKRKTDQALGPIGSHPLPNFALHLCQNAENAIAACRALAFPRDVAYY
CQMSKGDRLELLLHNITQQFAIAFSGPLGWDDVSREEYDNQKKEVTQLRKEVRALKESLA
LAESSKEGLFADVKREQEEKKILQAEKNSLASHNASLEEKLKVLTNELFVAGVQASSNFT
EGVNEGHRLFPGSSEGFRFMQEFVRRFFHRLWRSTTFTREASNLARFFFSAAVKAVQKRL
SGASIEFPLIEAELAEDLPDDEIPGFEGDVNEDPDLEWWEQVYWELIEDFSR
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgggtttttgcctgtacaacaatattgctattgccgcaagttttcttttgaacagaaga
ccaaagttgggtgtcggcaagatattgattgtagattgggatgtacatcatggtaatggt
actcagaagatgttctacgaagatccccgagtacttaccttctccgtacataggcatgat
tctggggaattctatccatatgggaatgacgggtcgtatagcatgattggagaaggtgca
ggtgctggatacaatattaatgtaccttgggaaaatgatttgtgcggagatgctgattat
tttgccgtgtgggaccatatattaattcccgttgctaggaaattcaatcctgacttgata
atggtcgctgcaggatttgacgcagccttaggcgatcctcttggaggctgttgtcttagt
ccgtacgcatattcagttatgctccgcaagttgatggatatttcgcggggtaagaatatt
gttttggcactcgaaggaggatacaatcttgtttccttagcaaaatcagcccaagcttgt
gtcgaagtattactacaagacaagcctcttacgaggtcctcggtggatcttccacttaaa
tcaacagcacttgtgatacgaacagtacgccaagcggtaagcagatattggccggttctt
gcttctgaattaacggaccaagtaatcaatagcagtcgaagaccatcatcacaaactgag
gatgtagcggatacctccacctctagtgcgatgacgaattcaaaaggtgaacaggtttgt
agtgctgagagaaaaaacgacaaaaaaaagaacgtagcagatctaaggatgaagagaatg
ttccgagacagtaaatcagcggctcgcccctctgcgccggagtccgggttccaggcgtcg
gatttccaacgccctttggctgtcgaatccgataagaggctcccggaggagagtgtttca
aaatcgaaaaccgctagaaagaatgtcgggcccacgtgcctacgaggtggattacggatt
gaggactccgacccccctcaacagtcatcggctttagttgtggcctcctcctcgctgccc
cctaccaccgaggagacctcagagaaagagtcttcttcgaagaagaggaagacagatcag
gcccttgggccaattggttcgcatcccctccctaacttcgcccttcatctctgtcagaac
gcggagaacgccattgccgcgtgtcgggctttagcttttccccgagatgtcgcctactat
tgtcagatgagtaaaggcgacagactcgagctgcttctgcacaacatcactcagcaattt
gctatcgccttctcgggccccctaggatgggacgacgtttctcgggaagagtacgataac
cagaagaaggaggttacccaacttcgaaaagaagttcgagctttgaaggagagcttagcg
ttggcggagtcgtccaaagaggggttgttcgcggacgtaaagcgagagcaggaagagaaa
aagatcctgcaggcagagaagaactcactggcatcgcataatgccagtttggaagagaag
ttgaaagtattgaccaacgaactctttgtcgccggggtgcaggcgtcttccaacttcacc
gagggtgtcaatgaagggcataggctgttcccggggtcatcagaggggttccgcttcatg
caagaattcgttcgccgtttctttcaccgtctatggcgttcgacaacctttactcgagaa
gcatcgaacttagctcgtttcttcttctcggccgcagtcaaggctgtccaaaaacggttg
agtggcgctagtattgagtttccgttgatcgaggctgagctcgctgaagaccttccagat
gacgagattccgggcttcgagggggatgtgaatgaagaccccgacttagaatggtgggaa
caagtgtattgggagctcattgaggatttttctcgttaa
DBGET
integrated database retrieval system
