Erythranthe guttata (spotted monkey flower): 105973479
Help
Entry
105973479 CDS
T07346
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105973479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egt03041
]
105973479
Enzymes [BR:
egt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105973479
Spliceosome [BR:
egt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105973479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
WHD_HA2
HA2_C
AAA_22
DEAD
PWI
AAA_30
T2SSE
AAA_19
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-GeneID:
105973479
NCBI-ProteinID:
XP_012853960
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MGDLKTWVSDKLMALLGYSQATVVQYVITLSKKASSPSDIVNQLVDLGISSSAETFAFAK
EIFARVEHRSSGPNLYQQQEKELAKLAQKQKTYKLLEADDEDDEIAPLPKKEKNRSKKFR
KRSETQDDMDDDEVVKSGGDDRRVRRKTSRDEDNGSESEEEKILQDQREKEQLERNIREK
DTAGTRKITDQKLTKKEEEEAIRRSDALENDDGIGTLRKVSRQEYLKKREQKKLDELRDD
IEDEQYLFEGVKLTEAEKREQRYKREIYELVKKRTEEADYTNEYRMPDAYDQDGVVNQEK
RFAVALQRYRDPAAEEKMNPFAEQEAWEEHQIGKATLKFGSKDKKQKHDDYDFVFEDQIE
FIKASVMGGVNVEQDAAVQSPEDSTAKTELENLQSVRKTLPIYAYRDGLLEAINKYQVLV
IVGETGSGKTTQIPQYLHEAGFTARGKIGCTQPRRVAAMSVSARVSQEMGVKLGHEVGYS
IRFEDCTSDKTVIKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLVKDIA
RFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRFPVEINYTTAPEADYLDAAIMTIF
QIHVKQPPGDGDILVFLTGQEEIETVEEILKHRTRGLGTKIAELIICPIYANLPTELQAK
IFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKMKSYNPRTGMESLLITPISKAS
AEQRAGRSGRTGPGKCFRLYTAYNYYNDLDDNTVPEIQRTNLANVVLTLKSLGINDLLNF
DFMDPPPSESLLKALELLYALSALNKHGELTKLGRRMAEFPLDPMLSKMIVASDKYQCSD
EIISVAAMLSIGNSIFYRPKDKQVHADNARMNFHMGNVGDHIALLKVYSSWKETNFSTQW
CYENYIQVRSMKRARDIRDQLEGLLERVEIELTTNPNDLDPVKKAITAGFFPHSARLQNS
GSYRTVKHPQTVHIHPSSGLAQLLPRWVIYHELVLTTKEYMRQVTELKPEWLVELAPHYY
QLKDVEDLASKKMPRGQGRATKD
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatttgaagacatgggtttctgataaattgatggcccttttggggtattcacag
gccactgtggttcagtatgtgattactctatctaaaaaggcctcatccccctcagatatt
gtaaaccaactagttgatttggggatctcatcctctgcggaaactttcgcatttgcgaaa
gaaattttcgcaagagtcgagcataggtcttcagggccgaatctatatcagcagcaggag
aaggaattggccaaactcgcacagaaacagaagacttacaaacttttggaggcagatgat
gaggatgatgagattgctccattgcctaagaaggaaaaaaatcgaagcaagaagttcagg
aaaagaagtgaaactcaggacgacatggatgatgatgaggtggtaaaaagtggaggtgat
gacagacgagtacgaagaaagacttcacgtgatgaagataatggctctgagtcagaagaa
gaaaaaatactgcaagaccagagagaaaaagagcagttggaacgtaatatcagagaaaag
gatacagcagggaccaggaagataactgaccagaagttaacaaagaaggaagaagaagag
gcaattcgaagatctgatgctctcgagaatgatgatggcattggcacattaaggaaagtg
tcgaggcaagagtatttgaagaaaagggagcaaaagaaattagatgagctcagagatgat
atagaagacgagcagtacttatttgagggtgtcaaactaactgaagcagagaaacgtgag
caaagatataagagagaaatatatgagctcgtgaagaagaggacagaagaggccgattat
acaaatgagtatcggatgcctgacgcatatgaccaggatggtgttgtgaatcaagaaaag
agatttgctgtggcattacagcgttacagggatcctgctgcagaagaaaagatgaacccg
ttcgcggaacaagaagcatgggaggaacatcagattggaaaagcaactcttaagtttgga
tccaaggataaaaagcaaaaacacgacgattacgacttcgtttttgaagaccaaatagag
ttcataaaggcatcggttatgggtggtgtaaatgttgaacaggatgccgccgtgcagtca
ccagaggattctaccgccaaaacagaattagaaaaccttcagagtgtcaggaagaccctg
ccaatctatgcttacagggatggattgctcgaagctatcaacaagtatcaggttcttgtt
attgttggagagacgggttctggaaaaactacgcagatacctcagtaccttcacgaggca
ggattcacagcgcgtggaaagattggatgtacccaaccacgtcgtgttgctgccatgagt
gtttcggctcgagtttctcaagaaatgggagtaaaacttggacatgaggtcggctattct
attcggtttgaagactgtacttcagataagacggttataaagtatatgacagatggaatg
ttattgcgtgaattccttggagaacccgaccttgcaagttacagtgtggtgatggttgat
gaggcccatgaaagaacactctcaaccgatattctgtttggcttggttaaggatatcgcc
cgatttcgacccgatctcaagttacttatttcaagtgcaactctcgacgctgagaagttc
agtgattatttcgattctgctccaattttcaagataccaggaaggagattccccgtcgaa
attaattacacaaccgcccctgaagctgattacctggacgctgcaattatgaccattttc
caaatccacgtcaaacagccacctggcgatggagacatcctagttttcctaaccggacaa
gaagagattgaaactgtcgaagagattctcaagcataggactcgaggattggggacaaaa
atagccgaactcatcatttgtcctatttacgcaaacttacccacagaactgcaggctaaa
atattcgaacccacccccgaaggggcccgcaaagttgtccttgcaacaaatatcgccgaa
acctcattgaccattgacggtataaaatacgtcatcgatccaggtttctctaagatgaag
tcttacaaccctcgaactggaatggaatctttgctgattactcctatatcgaaagcatct
gccgaacaacgggcgggtcgatctggaagaacgggtcccgggaaatgttttcggttgtat
accgcttataattactataatgacctcgacgataataccgtacctgaaatacagaggact
aacttggcgaatgtagtgcttactctgaagagtcttggtatcaatgatttgcttaacttt
gacttcatggaccctccaccttctgaatctttgttgaaggcattggaactgctgtatgcg
ctgagtgcacttaacaagcatggtgagttgacgaaactcggtagaaggatggctgagttt
ccgctcgaccctatgctgtcgaagatgattgttgcctctgataaataccagtgctctgac
gagatcatatctgttgctgcgatgctgtctattggaaattctatcttctatcgcccgaag
gacaagcaagtccatgcagacaatgctcgtatgaattttcacatgggaaacgttggagat
catattgctctgctgaaggtttatagttcgtggaaggaaacaaacttttctacgcaatgg
tgctatgaaaattatatccaggtcagaagcatgaagagggctagagacatacgggatcaa
ctggaagggcttttggaaagagttgaaattgagttgactacaaaccctaacgatttagac
ccagtaaagaaagccataacagccgggtttttcccccactcagcaagactacaaaactct
ggatcttatagaactgtcaaacatccacagactgttcatattcaccctagctccggttta
gcacagttacttccgagatgggtcatctaccatgagctggttttaacaactaaagagtat
atgcgccaggtgaccgaacttaaacctgaatggctggtggaattagcaccccactactat
cagttgaaggatgtggaagatctggcgtcaaagaaaatgcctcgtggccagggtcgagca
actaaggattga
DBGET
integrated database retrieval system
