Erythranthe guttata (spotted monkey flower): 105976559
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Entry
105976559 CDS
T07346
Name
(RefSeq) general negative regulator of transcription subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105976559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105976559
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105976559
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105976559
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
105976559
NCBI-ProteinID:
XP_012857250
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALMDARKQIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKGETRDWLNNVVSELENQIDSFEAEIEGLSVKKGKTRPPRLTHLETSIGRHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVES
LEDLVTIGPPGLVKGASATSAVLNMKTSLAAVPTPPATTSASVQQTPPSLDQVDETAFQD
DAVARTPPPKSSSLSISAPQTPASGLAASAITSAGSASSPVAVSSPIKEEEIANFPGRKS
SPALAETGLRAIGKGGLPSQPTSNILPSSGNTISSNGTIPLGSEIGKRNILVSDDRSASS
GIAQSLVSPLGNRVILSQAAKASDGLGSADTGNVSDAAIMGSRVFTSPVVPGMQWRPGSS
FQNQNEAGQFRGRTEIAPDLREKFLQRFQQVQQQGQTNVLGMPPLAGGKQYSAQQQNLLL
QQFNAQSSSISPQLGMGIGVQTSGLSSVATSASLQPQPSAIHQSSNQQAVISSTSKDAET
SLTKVEELQQQQPLTEDLAPDYSSNSGLGKSLVQDDEMKTSHALDTTAAVASGPLVEPSQ
VMRETDLSPGQPLQPASSSGSLGVIGRRSVSDLGAIGDNISASTANSGGMHDQIYNLQML
EAAYYRLPQPKDSERARTYTPRHPVITPQSYPQVQAPIVNNPAFWERLGPDSYATDMLFF
SFYYQQNTYQQYLAAKELKKQSWRYHRKFNSWFQRHEEPKVATDDFEQGTYVYFDFHISS
DEQQGWCQRIKTEFIFEYSFLEDELII
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaagtcggaagctgcagggggagatcgaccgagttctcaagaaggttcaagag
ggcgtcgatgtatttgatagcatctggaacaaggtctatgatacggacaatgcaaatcag
aaagaaaaattcgaggcggacttgaagaaggagataaagaagctacagagatacagagac
cagatcaaaacatggatacagtccagcgagatcaaggataagaaggttagtgcctcttat
gagcaggctctgatggacgctcgaaagcaaattgagcgtgaaatggaacgatttaagata
tgtgaaaaagaaacgaagacaaaagcattctcaaaagaaggcctaggccagcagcctaaa
acggatccgaaggaaaaagctaaaggagaaacaagagattggttaaataatgtggtcagc
gagctggaaaatcaaattgatagctttgaagctgaaatagaggggctttctgttaagaaa
gggaagacaaggcctcccagactgacgcatctggagacatccattggtcggcataaggct
catattatgaagttagaattaattctaaggctgttggacaacgatgaattgagcccagag
caagtcaatgatgtaaaggatttcttggatgactacgtggaaagaaatcaggaggacttt
gatgaatttagtgatgtcgatgagctttacagttctctacctctggacaaggtggagtct
cttgaagacctagttactatcggtcctcctggtcttgtaaagggtgccagtgccaccagt
gcagttttaaatatgaaaacatctttggctgcagtacccactcctccagcaacaacctca
gcttccgtccagcaaactcctccttccctcgaccaggtggatgaaacagctttccaggat
gatgcagttgctagaactccacctcctaaaagtagttccctcagtatttctgcaccacaa
acgccagcatctggccttgcagcttctgccatcacaagtgccggcagtgcttcatcccca
gtagctgtatcaagtcctataaaagaagaggagatcgcaaacttccctggtcgtaaatca
tcaccagctcttgctgaaactggattaagggctattggtaaaggtggattgccaagtcaa
ccaacttctaacatccttcccagttctggaaacacaatttccagcaatggtaccattcct
ttgggttctgaaattgggaaaaggaatattttggtatccgatgatcgatccgcgagcagt
ggtattgcacagtctcttgtatctcccctaggcaatagagtaatcttgtcacaagctgcc
aaggctagtgatggacttggatcagctgatactggaaatgttagcgatgctgcgattatg
ggcagcagggttttcacttctcctgttgttcctggtatgcagtggaggcccggaagttcc
ttccagaaccagaatgaagcggggcagtttcgtggaagaaccgagattgctcccgatcta
agggagaagtttctacaacgatttcagcaggtacagcagcaaggtcagactaatgttctt
ggcatgcctcctcttgctggggggaagcagtactctgctcagcagcagaatctacttcta
cagcagttcaatgctcaaagctcgtctatctcacctcaactcgggatggggataggagtc
caaacttcaggtcttagcagtgttgcaacatctgcttctctgcagccacaaccgagtgca
atacaccaatcatctaatcagcaggcagtcatatcttcaacatctaaggatgcagaaact
agccttacaaaagttgaggaattgcagcagcaacagcctctcacagaagacttggcgcca
gattatagttctaactccggcctaggaaaaagtctcgtgcaagatgatgaaatgaaaact
tcccatgccttagatactacagctgcagttgcttctggaccacttgttgaaccttcccag
gtgatgagggaaaccgacctttctccagggcaacctttgcaaccagcttcatcttctgga
agtcttggtgttattggtcgaagaagtgtatctgatctcggtgctattggagataacatc
agtgcatcaactgcaaattcgggaggaatgcacgatcagatatacaatttgcagatgctc
gaggctgcttattatagacttcctcaacccaaagattctgaacgtgcaaggacctatact
ccaagacaccctgtaatcactcctcagagttatcctcaagtgcaagcgccaattgtcaat
aatcctgccttctgggagcggcttggtccagattcttatgccactgatatgctcttcttt
tcattttactatcaacagaatacttaccagcaatacttggctgctaaggaattgaaaaag
cagtcttggaggtaccacagaaaattcaattcatggttccaacggcacgaagagccaaaa
gttgccacagatgattttgaacaggggacatatgtctactttgacttccatatttccagt
gacgaacaacagggatggtgccagagaatcaagacagagtttatctttgaatacagtttt
cttgaagatgagctaatcatatag
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