Elaeis guineensis (African oil palm): 105032733
Help
Entry
105032733 CDS
T03921
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105032733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egu04121
]
105032733
Ubiquitin system [BR:
egu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105032733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
105032733
NCBI-ProteinID:
XP_010905567
UniProt:
A0A6I9Q927
LinkDB
All DBs
Position
6:22829537..22837491
Genome browser
AA seq
589 aa
AA seq
DB search
MAIKKQKELDIEEKSPENRILSFPDEVLERVLVFVKTHKDRSAVSLVCRDWYNAERWSRT
HVFIGNCYSVSPEMVARRFPNIRSVTLKGKPRFSDFNLVPPNWGSDIHPWLVVFASAYPF
LEELRLKRMTVTDESLDFLARSFPEFKALSLVSCDGFSTDGLASITTYCRNLTELDIQES
GIEDLGGSWLNFPESFTSLEALNFANLHSEVNFDALERLVARCKSLKVLKVNKHVMLEQL
RRLLVRAPQLTELGTGPFSQDHKLRSHIDLESAFSNCKNLNTLSGLWEVSSMYLPALFPA
CTNLTFLNLSYTALQSAELAKLLQKCPLLRRLWVLDTVEDKGLEAVASSCHLLQELRVFP
ADPFEQEVIMEGGGNGVTESGFVAVSEGCPNLHYVLYFCHQMTNAAVATVVRNCPNFTHF
RLCIMDMRRPDYLTNEPMDEAFGAVVKTCSKLRRLAVSGLLTDRAFEYIGTYAKNLETLS
VAFAGSSDRGMQCVLEGCPKLRKLEIRDCPFGNAALLSGLERYESMRSLWMSACNLTMNG
CQLLARKMPRLNVEVIKEDESDDMHAEKVYVYRSVAGPRRDAPPFVLTL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggctatcaagaagcagaaggaattggatatagaagagaagtccccagagaatcgcatc
ctttcctttcctgatgaagttttggaacgtgttctggtctttgtgaagactcacaaggat
cggagtgccgtttctctggtttgcagagactggtacaatgccgagcgatggagccggacc
catgtatttattgggaactgctactctgtgtctccggagatggtagctcgtagatttcca
aatatccggagtgtcactctcaaggggaagccccggttctctgatttcaaccttgttcca
ccaaattggggctctgacatccatccatggcttgtggtttttgcttcagcatatcctttc
cttgaggagctccgtcttaaaaggatgacagttacagacgagagccttgatttcttggca
cgatcttttcctgaatttaaagctctttcccttgtcagttgtgatggcttcagcactgat
ggtcttgcctccattacaacctactgcaggaacttgacggagcttgacatacaggagagt
gggattgaagaccttggtggcagctggttaaactttccggaaagcttcacatcgcttgaa
gcacttaattttgcaaatctgcattctgaagtaaattttgatgccttggagagactagtg
gccaggtgcaagtcattgaaggtattaaaagtaaataagcatgtcatgttggagcagtta
cggaggctacttgtgagagctcctcaacttacagagcttggaactggtccattttcacaa
gatcacaaactccgatcacacatagatctggaaagtgcattcagtaactgcaagaacttg
aatactctctcaggcttatgggaagtttcctccatgtatcttccagcattatttcctgca
tgcacaaatttgactttcctgaatttgagctacacagctctgcaaagtgcagaactggca
aagcttttgcaaaagtgtcctcttcttcgccgactttgggttctagatactgtagaagac
aaagggttagaagctgtggcatcaagctgtcatctgctacaagaactccgagtgtttcca
gcagacccatttgagcaggaagtgatcatggaaggtggtggcaatggtgtcactgaatct
ggatttgttgctgtttcagagggctgccccaatcttcactatgttctttacttctgtcat
cagatgacgaatgctgcagtggcaactgtggtgcgcaactgccctaacttcacccacttc
cgtctctgtataatggacatgcgccggcctgactatttgaccaatgaacccatggatgaa
gccttcggtgctgttgtaaagacttgcagtaaacttcgaaggcttgctgtttctgggctt
ttgactgaccgggcctttgagtatattggtacctatgctaagaaccttgagaccctgtca
gtggcttttgcaggcagcagtgacagaggcatgcaatgcgttttagagggatgccctaag
ctgcgtaagctggaaataagagactgtccttttgggaatgcagcattgctttcagggctt
gagaggtatgaatccatgaggtcactgtggatgtccgcctgcaacttgacaatgaatgga
tgtcaactcctggcaaggaagatgccaaggttgaatgtggaggttatcaaggaggatgag
agtgatgacatgcatgctgagaaggtttacgtataccggtcagttgccgggcctagaagg
gatgcccctccctttgttctcaccctctga
DBGET
integrated database retrieval system
