Elaeis guineensis (African oil palm): 105033018
Help
Entry
105033018 CDS
T03921
Name
(RefSeq) nuclear pore complex protein NUP96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105033018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105033018
03036 Chromosome and associated proteins [BR:
egu03036
]
105033018
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105033018
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105033018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
105033018
NCBI-ProteinID:
XP_010905946
UniProt:
A0A6I9QAV2
LinkDB
All DBs
Position
13:complement(8214769..8222830)
Genome browser
AA seq
1062 aa
AA seq
DB search
MVSSTSSLLPKGVLCKPYDSIGNDPFGSHSESVLDVGNCDSIKSVQCKKRRMSDSVEVAA
SLPTLHSSEYFIKPSIDELAASEFVDSGYCSRVPNLVVGRVGYGQVKFFGYTDVRGLNLD
HIIKFDRHSVVVYENEIDKPAVGQGLNKVAEVTLILELRSPCSKRLESQRLITKLQKSAD
RQGACFLSFNLVNSEWKFLVPHFSRFGLDEDEEDDMVVDDVNVQPAAEIKEPQVHSDGLV
LSHSLPAHLGLDPVKMQEMRKLMFPVEEEDEELDGSFPHDKRYISKEYMKAGSPSSSAKS
FNNRTPLQGSSRKTDSKVSPRTVRKAPQALIEYNINSSELSPSRNILMTGRNKGMQLRLT
KIEGFKLEEKHSTPLSGGYSKNIVDAALFMGRSFRVGWGPNGILVHSGTPVGSSRSGLSS
VISVQKVAVDRAVRDENNKVKEELVDLCFSALLDLHKSLDHEATDVDLGSCKIKLQKVVC
NRVTLSEICQAYTGIVEKQLEVTGLSTSSRVLLMHQVTIWELIKVLFSERETSGNSKPLI
DDDGEEMLVDIKDSSVDIDIEARPFVRRAEFSYWLQDSVCHRVQEEVSCLNDSSYLEHIL
LLLTGRQLDAAVELAASRGDVRLAILLSQAGGSVVNRSDMAQQLDLWRMNGLDFEYIEND
RLRLYELLAGNIQGALQDSSVDWKRYLGLVMWYQLPPDTSLPVIIHTYQELLDKGRAPHP
VPAYIDEGPLEEAVDWSVGDRYDIAYYLMLLHSNEDKTFSPLKTMFSALSSTHDPLDYHM
IWHQCAILEAIGAFSSNDLHILDMSLVSQLLCLGQCHWAIYVVVHMPYDDNFSHIQANLI
KEILLQYCETWSTQEIQRQFIEDLGIPSEWMHEALAIYFQYIGDLPKALEHFLESSNWQK
AHSIFMTSVAHYLFLSSKHSEIWRITSSMEEHKSEIADWDLGAGIYIDFYVIRSSLQEEN
VMSESDPLEKNREACQNFFSRLNDSLLVWRSRLPVDARATYSKMSEELCNLLVSTPGESS
TPSVHMSCFKTMLSAPIPEDLRSSHLQNALSVFTYLLSESET
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgtccacctcctcactcctgcccaagggggttttgtgcaaaccttacgacagc
ataggcaatgatccatttggttctcatagtgaaagtgtgttagatgtgggcaattgtgat
tccataaagtcagttcagtgtaagaaaagaagaatgtctgacagtgtggaggtggcagca
tctttacccactttgcattcttctgaatattttataaaaccctcaattgatgagctggca
gccagtgaatttgttgattctggttactgcagcagggttccaaaccttgtggttggaaga
gtcggttatggacaagttaaattttttggttacaccgatgttagaggattgaatctagat
catatcatcaagtttgataggcattccgtggtggtgtatgaaaatgagattgacaagcct
gcagtgggccagggtcttaacaaagttgctgaggtgaccctgatccttgagttgagatct
ccatgttcaaaaaggttggaatctcagagacttattaccaaattgcagaaaagtgctgac
agacagggagcctgctttctttcatttaacttggttaacagtgagtggaaatttctagtc
cctcatttcagtagatttggattggatgaagatgaggaagatgatatggttgtagatgat
gttaatgttcaaccggctgctgagataaaagaacctcaagtgcattctgatggactggtt
ttatctcattcacttccagctcatcttgggcttgatcctgtgaagatgcaagaaatgagg
aagttgatgtttcctgtagaagaggaagatgaagaacttgacggttcctttccacatgac
aagagatatattagcaaggagtacatgaaggcaggttcaccaagctccagtgccaaaagt
tttaataacagaactcctttacaaggttcttcacggaagacagatagtaaagttagtcct
cgtactgtgcgaaaagcaccacaagctttaattgaatacaatataaatagttctgaatta
agcccatctagaaacattcttatgactgggcgaaacaagggtatgcaactgaggctgaca
aaaattgaaggctttaaattggaggaaaaacattcgactccattatctggaggatactct
aaaaacatcgttgatgctgcacttttcatgggaagatcatttcgtgttggatggggacca
aatggcatccttgttcatagtggtacaccagtgggcagttccagaagtggattgtcttct
gtaattagtgtacagaaagttgcagtagacagagctgtgagagatgaaaacaataaagtc
aaggaagagcttgttgatttgtgtttttctgcgctgctggatctacacaagtctctagac
catgaagccactgatgtggaccttggttcttgcaaaataaagcttcagaaggttgtttgc
aatcgtgtaacactctcagagatatgccaggcttatactggaatagttgagaaacagcta
gaggttactggtttatctacatcttctcgtgtgcttttaatgcatcaagtcacaatttgg
gaactgataaaagttctgttctcagagagggaaacaagtgggaactcgaaacctctaatt
gatgatgatggtgaggaaatgttggttgatattaaggatagttctgttgacatagacatt
gaagcaagaccttttgttcgcagagcagagttcagttattggctgcaagatagtgtttgc
caccgggtacaagaagaagtgagctgtctaaatgattcaagttatttggaacacatactg
ttacttttgacaggacggcagctggatgcagcagtggaacttgctgcttctagaggagat
gtacggctggctatattgttgagtcaggctggtgggtcggtagtgaatcggtctgacatg
gctcaacaactggatctctggaggatgaatgggttggactttgagtatattgagaatgac
aggttaaggttgtatgaattgcttgcaggtaatatccaaggtgctcttcaggattcatca
gttgattggaaaagatacctgggattggtgatgtggtatcaactaccaccagatacttca
ttacctgtaataattcacacttatcaggagcttcttgacaaaggaagggctccacatcca
gtcccagcttatattgatgaaggacctctggaagaagcagtggactggagtgtaggtgat
cgttatgatatagcatattatctcatgctgcttcattctaatgaagacaaaaccttcagt
ccactgaaaaccatgttcagtgccctttcttctacacatgatccacttgactaccacatg
atttggcatcaatgtgccatattggaagctattggtgcattcagttctaatgatcttcac
attcttgatatgagccttgtttcccagctgctatgtcttgggcagtgccattgggccatc
tatgttgttgtccacatgccttatgatgataatttctcccatattcaggccaatcttatt
aaggaaattttgttacaatattgcgaaacttggagtacacaggaaattcagcgccagttc
attgaagatcttggcataccatcagaatggatgcatgaggccttggcaatatattttcaa
tacattggagatcttccaaaggcccttgaacattttcttgagtcatctaactggcagaaa
gctcattcaatttttatgacatcagttgctcattatttgtttttatcatctaaacattca
gagatttggaggatcacaagctcgatggaagagcacaagtcagaaattgctgactgggac
ttgggtgctggaatttatattgatttctatgttataagaagttctttgcaagaagagaac
gtcatgagtgaatcggatcctcttgagaagaatagagaagcatgccaaaatttcttcagt
cgcttgaatgactcactcttagtttggaggagtagattacctgttgacgcgagggccacc
tattcaaaaatgtcagaagagctatgcaatctgcttgtgtccactcccggtgagagttct
actccatcggttcatatgagctgcttcaagacaatgctcagtgctcctattccagaagat
ctacggtctagtcatctgcagaatgctctttcagtttttacctacttgctctcagagtct
gagacgtga
DBGET
integrated database retrieval system
