KEGG   Elaeis guineensis (African oil palm): 105033280
Entry
105033280         CDS       T03921                                 
Name
(RefSeq) DNA damage-binding protein 1a
  KO
K10610  DNA damage-binding protein 1
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03420  Nucleotide excision repair
egu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105033280
  09124 Replication and repair
   03420 Nucleotide excision repair
    105033280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:egu04121]
    105033280
   03400 DNA repair and recombination proteins [BR:egu03400]
    105033280
Ubiquitin system [BR:egu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     105033280
DNA repair and recombination proteins [BR:egu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      105033280
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      105033280
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A
Other DBs
NCBI-GeneID: 105033280
NCBI-ProteinID: XP_010906318
UniProt: A0A6I9QB65
LinkDB
Position
5:complement(45450927..45498946)
AA seq 1089 aa
MSVWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTSHGLQPMLDVPIYG
RIATLELFRPHGEPQDFLFIATERYKFCVLQWDAETSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCVKPTIVVL
YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGAGLLIPVPMPLGGVIIIGEETIVYC
SATAFKAIPIRPSITRAYGRVDADGSRYLLSDNAGLLHLLVITHERERVTGLKIEHLGET
SVASTISYLDNAVVYVGSSYGDSQLIKLNLQPDVKGSYIEVLERYVNLGPIVDFCIVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGLWSLRSSTNDPYDTFLVVS
FISETRILAMNMDDELEETEIEGFDAQAQTLFCHNAMHDQLVQVTANSVRLVSSTSRALL
DQWNASSGFSVNVATANASQILLATGGGHLVYLEIGNGKLVQAKHIQMEYEISCLDINPI
GENSHYSSLAAVGMWTDISVRIFSLPSLELLTKENLGGEIIPRSVLLCNFEGVSYLLCAL
GDGHLFNFLLNTSSGELSDRKKVSLGTQPITLRTFSSKDATHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLGEHARRICH
QERSRTFAICSLKNCQTITEETEMHFVRLLDDQTFEFISTYALDTYECGCSVISCSFSDD
DNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLREDGSHELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEG
AIEERARDYNANWMTAVEILDDDIYLGAENNFNLFTVRRNSDAATDEERGRLEVIGEYHL
GEFVNRFRHGSLVMCLPDSEAGHTPTVIFGTVNGVIGVIASLPHDQYLFLEKLQSNLVKV
IKGVGGLSHEQWRSFNNEKKMVDSRNFLDGDLIESFLDLSRSRMEEISKGMGVSVEELCK
RVEELTRLH
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgagcgtgtggaactacgtggtgacggcccacaagccgacgaacgtcacccactcctgc
gtcggcaacttcaccagcccccaagagctcaacctcatcatcgctaaatgtactcgcatc
gagatccatttgcttacttctcatggcctacagcctatgctggatgttccaatatatgga
agaattgcgacacttgaacttttccgtcctcatggtgaacctcaagatttcctatttatt
gctacagaaagatacaaattctgtgttcttcagtgggatgcagagacatcagaactcatc
acaagagctatgggagatgtttctgatcgcattggtcgcccaacagataacggacagatt
ggcataattgatccagactgtagattaattggtctccacctctatgatggcttgttcaag
gtcataccctttgataacaaaggacaattaaaggaagcattcaacatcaggcttgaagaa
cttcaagttttggatatcaaatttctatatggctgtgtgaagcccactatcgtagtctta
taccaggataacaaggatgccaggcatgttaagacctatgaggttgcactcaaggataaa
gactttgttgaaggtccatggtcacaaaataatcttgataatggggctggtcttctaata
cctgttcccatgcctcttggtggtgtaataattattggggaagaaacgattgtatattgt
agtgcgactgcatttaaagctataccaatcagaccatctattacaagagcctatggaagg
gttgatgcggacggttctcgatatttgcttagtgacaatgcgggtcttctgcatttactt
gtcatcacccatgagagagaaagggtaactggactcaaaattgaacacttaggcgagact
tctgttgcatcaacaatatcttatcttgataatgcagttgtatatgttggctcaagctat
ggagattcacagttgataaaactcaatctgcaacctgatgtgaaaggttcatacattgaa
gttcttgaaagatatgtcaatctggggcctattgtggatttctgtatcgttgatcttgag
aggcaaggccagggacaggttgttacatgctcaggtgcttataaagatggttcccttcgc
attgttcggaatggcatagggattaatgaacaggcatctgtagaacttcaaggcatcaaa
ggattgtggtctttacgatcttctactaatgatccatatgacaccttcttggttgtaagc
tttatcagtgagacacgtattttggcgatgaatatggatgatgagttagaagaaactgag
atagaaggatttgatgcacaagcacaaaccttgttttgtcacaatgccatgcatgatcaa
cttgtacaggttactgctaattctgttcgcttagtgagttctacttcccgggcgttgcta
gatcaatggaatgcatcttcagggttctctgtcaatgttgctactgctaatgcctcccag
attttattggccactggaggggggcatcttgtttacctagaaattgggaatggcaagttg
gttcaagcaaaacacatacagatggaatatgaaatttcttgtcttgacataaatccaatt
ggtgaaaattctcattacagttcactagcagcagtaggaatgtggacagacataagtgtt
aggatattctcacttccaagcctggaactactcacaaaggaaaatcttggtggggagatc
attcctcggtctgttcttctatgtaactttgaaggggtgtcctatctgctttgtgctctt
ggagatgggcacctgttcaattttctattgaacacaagttctggtgagttgtctgataga
aagaaggtttctcttgggacacaacctatcacactccgcacgttttcttcgaaggatgcc
acacatgtatttgctgcatccgatagacccacagttatctacagcagcaacaagaagtta
ctttatagtaatgtaaatttgaaagaagttagtcatatgtgtccttttaactctgccgct
tttccagacagccttgcaattgctaaagaaggtgaactttcaattggtaccattgatgac
atccaaaagcttcacatccgcacaatccctctgggagaacatgcccgacgtatctgccat
caggagcggtctcgaacatttgcaatctgtagtcttaagaactgccagacaattacagag
gaaacagaaatgcactttgttcgattattggatgatcaaacgtttgagttcatatcaacc
tatgcacttgatacatacgaatgtggctgttccgttattagctgttcgttctcagatgat
gacaatgtttattattgtgtgggaactgcatatgtgttgcccgaggaaaatgagcctacc
aagggacgaatcctggtttttatcgtcgaagatgggaaactacaattgattgctgaaaag
gaaacgaagggagcagtgtattctctcaatgctttcaatggaaaattgctggctgctatc
aatcagaagatccagttatacaaatggatgctccgggaagatggatcacatgaattgcaa
tctgaatgtggacatcatggacacatactggccttgtatgttcaaacacgtggtgatttc
attgtagttggtgatctgatgaagtctatatccttgttgttgtataagcatgaggagggt
gcaattgaggagcgagcccgtgactacaatgcaaactggatgactgctgttgagatcctt
gatgatgacatctaccttggagctgagaacaatttcaacctttttacagtccgcaggaat
agtgatgcggcaacagatgaggagcggggccggcttgaggttattggagagtaccacctt
ggtgagtttgtcaacaggttccggcatgggtctcttgtcatgtgccttccagactcggag
gctggccacacaccgacggtcatctttggtactgtcaatggtgtgattggtgttattgcc
tcccttccccatgaccaatatttgtttcttgagaaacttcagtccaaccttgtcaaggtt
ataaagggtgtgggtggacttagtcatgagcagtggcgatcgttcaacaatgagaaaaag
atggtagattctaggaacttcctggatggggacttgattgagtcatttcttgatcttagc
cgcagtcgaatggaggagatttcaaagggaatgggggtttcagtagaggagctgtgcaag
agagttgaggagcttacaagattgcactag

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