Elaeis guineensis (African oil palm): 105033280
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Entry
105033280 CDS
T03921
Name
(RefSeq) DNA damage-binding protein 1a
KO
K10610
DNA damage-binding protein 1
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03420
Nucleotide excision repair
egu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105033280
09124 Replication and repair
03420 Nucleotide excision repair
105033280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egu04121
]
105033280
03400 DNA repair and recombination proteins [BR:
egu03400
]
105033280
Ubiquitin system [BR:
egu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
105033280
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
105033280
TCR (transcription coupled repair) factors
Cul4-CSA complex
105033280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
105033280
NCBI-ProteinID:
XP_010906318
UniProt:
A0A6I9QB65
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Position
5:complement(45450927..45498946)
Genome browser
AA seq
1089 aa
AA seq
DB search
MSVWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTSHGLQPMLDVPIYG
RIATLELFRPHGEPQDFLFIATERYKFCVLQWDAETSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCVKPTIVVL
YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGAGLLIPVPMPLGGVIIIGEETIVYC
SATAFKAIPIRPSITRAYGRVDADGSRYLLSDNAGLLHLLVITHERERVTGLKIEHLGET
SVASTISYLDNAVVYVGSSYGDSQLIKLNLQPDVKGSYIEVLERYVNLGPIVDFCIVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGLWSLRSSTNDPYDTFLVVS
FISETRILAMNMDDELEETEIEGFDAQAQTLFCHNAMHDQLVQVTANSVRLVSSTSRALL
DQWNASSGFSVNVATANASQILLATGGGHLVYLEIGNGKLVQAKHIQMEYEISCLDINPI
GENSHYSSLAAVGMWTDISVRIFSLPSLELLTKENLGGEIIPRSVLLCNFEGVSYLLCAL
GDGHLFNFLLNTSSGELSDRKKVSLGTQPITLRTFSSKDATHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLGEHARRICH
QERSRTFAICSLKNCQTITEETEMHFVRLLDDQTFEFISTYALDTYECGCSVISCSFSDD
DNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLREDGSHELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEG
AIEERARDYNANWMTAVEILDDDIYLGAENNFNLFTVRRNSDAATDEERGRLEVIGEYHL
GEFVNRFRHGSLVMCLPDSEAGHTPTVIFGTVNGVIGVIASLPHDQYLFLEKLQSNLVKV
IKGVGGLSHEQWRSFNNEKKMVDSRNFLDGDLIESFLDLSRSRMEEISKGMGVSVEELCK
RVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgtggaactacgtggtgacggcccacaagccgacgaacgtcacccactcctgc
gtcggcaacttcaccagcccccaagagctcaacctcatcatcgctaaatgtactcgcatc
gagatccatttgcttacttctcatggcctacagcctatgctggatgttccaatatatgga
agaattgcgacacttgaacttttccgtcctcatggtgaacctcaagatttcctatttatt
gctacagaaagatacaaattctgtgttcttcagtgggatgcagagacatcagaactcatc
acaagagctatgggagatgtttctgatcgcattggtcgcccaacagataacggacagatt
ggcataattgatccagactgtagattaattggtctccacctctatgatggcttgttcaag
gtcataccctttgataacaaaggacaattaaaggaagcattcaacatcaggcttgaagaa
cttcaagttttggatatcaaatttctatatggctgtgtgaagcccactatcgtagtctta
taccaggataacaaggatgccaggcatgttaagacctatgaggttgcactcaaggataaa
gactttgttgaaggtccatggtcacaaaataatcttgataatggggctggtcttctaata
cctgttcccatgcctcttggtggtgtaataattattggggaagaaacgattgtatattgt
agtgcgactgcatttaaagctataccaatcagaccatctattacaagagcctatggaagg
gttgatgcggacggttctcgatatttgcttagtgacaatgcgggtcttctgcatttactt
gtcatcacccatgagagagaaagggtaactggactcaaaattgaacacttaggcgagact
tctgttgcatcaacaatatcttatcttgataatgcagttgtatatgttggctcaagctat
ggagattcacagttgataaaactcaatctgcaacctgatgtgaaaggttcatacattgaa
gttcttgaaagatatgtcaatctggggcctattgtggatttctgtatcgttgatcttgag
aggcaaggccagggacaggttgttacatgctcaggtgcttataaagatggttcccttcgc
attgttcggaatggcatagggattaatgaacaggcatctgtagaacttcaaggcatcaaa
ggattgtggtctttacgatcttctactaatgatccatatgacaccttcttggttgtaagc
tttatcagtgagacacgtattttggcgatgaatatggatgatgagttagaagaaactgag
atagaaggatttgatgcacaagcacaaaccttgttttgtcacaatgccatgcatgatcaa
cttgtacaggttactgctaattctgttcgcttagtgagttctacttcccgggcgttgcta
gatcaatggaatgcatcttcagggttctctgtcaatgttgctactgctaatgcctcccag
attttattggccactggaggggggcatcttgtttacctagaaattgggaatggcaagttg
gttcaagcaaaacacatacagatggaatatgaaatttcttgtcttgacataaatccaatt
ggtgaaaattctcattacagttcactagcagcagtaggaatgtggacagacataagtgtt
aggatattctcacttccaagcctggaactactcacaaaggaaaatcttggtggggagatc
attcctcggtctgttcttctatgtaactttgaaggggtgtcctatctgctttgtgctctt
ggagatgggcacctgttcaattttctattgaacacaagttctggtgagttgtctgataga
aagaaggtttctcttgggacacaacctatcacactccgcacgttttcttcgaaggatgcc
acacatgtatttgctgcatccgatagacccacagttatctacagcagcaacaagaagtta
ctttatagtaatgtaaatttgaaagaagttagtcatatgtgtccttttaactctgccgct
tttccagacagccttgcaattgctaaagaaggtgaactttcaattggtaccattgatgac
atccaaaagcttcacatccgcacaatccctctgggagaacatgcccgacgtatctgccat
caggagcggtctcgaacatttgcaatctgtagtcttaagaactgccagacaattacagag
gaaacagaaatgcactttgttcgattattggatgatcaaacgtttgagttcatatcaacc
tatgcacttgatacatacgaatgtggctgttccgttattagctgttcgttctcagatgat
gacaatgtttattattgtgtgggaactgcatatgtgttgcccgaggaaaatgagcctacc
aagggacgaatcctggtttttatcgtcgaagatgggaaactacaattgattgctgaaaag
gaaacgaagggagcagtgtattctctcaatgctttcaatggaaaattgctggctgctatc
aatcagaagatccagttatacaaatggatgctccgggaagatggatcacatgaattgcaa
tctgaatgtggacatcatggacacatactggccttgtatgttcaaacacgtggtgatttc
attgtagttggtgatctgatgaagtctatatccttgttgttgtataagcatgaggagggt
gcaattgaggagcgagcccgtgactacaatgcaaactggatgactgctgttgagatcctt
gatgatgacatctaccttggagctgagaacaatttcaacctttttacagtccgcaggaat
agtgatgcggcaacagatgaggagcggggccggcttgaggttattggagagtaccacctt
ggtgagtttgtcaacaggttccggcatgggtctcttgtcatgtgccttccagactcggag
gctggccacacaccgacggtcatctttggtactgtcaatggtgtgattggtgttattgcc
tcccttccccatgaccaatatttgtttcttgagaaacttcagtccaaccttgtcaaggtt
ataaagggtgtgggtggacttagtcatgagcagtggcgatcgttcaacaatgagaaaaag
atggtagattctaggaacttcctggatggggacttgattgagtcatttcttgatcttagc
cgcagtcgaatggaggagatttcaaagggaatgggggtttcagtagaggagctgtgcaag
agagttgaggagcttacaagattgcactag
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