Elaeis guineensis (African oil palm): 105033298
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Entry
105033298 CDS
T03921
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03082
ATP-dependent chromatin remodeling
egu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105033298
03083 Polycomb repressive complex
105033298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egu03036
]
105033298
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
105033298
Histone modification proteins
HAT complexes
HATB complex
105033298
HDAC complexes
Sin3A-HDAC complex
105033298
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
105033298
PRC2.2
105033298
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
105033298
Heterochromatin formation proteins
Other heterochromatin formation proteins
105033298
Chromatin remodeling factors
NuRD complex
105033298
NuRF complex
105033298
NuRF complex (fruit fly)
105033298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
105033298
NCBI-ProteinID:
XP_010906367
UniProt:
A0A6I9QBN0
LinkDB
All DBs
Position
2:123157016..123168694
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AA seq
466 aa
AA seq
DB search
MRERGKAVQSSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLY
LSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE
LPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSHPDLVLTGHQENAEFALAMCPSD
PCVLSGGKDKLVVLWSIQDHISTLAESAAKSPATPATSSGKQPAKAGHEKSSDSPTVGPR
GVYQGHEDTVEDVQFCPSSAQEFCSVGDDACLILWDARAGTSPAIKVEKAHNADLHCVDW
NPHDENLILTGSADNSVRMFDRRNLTSGGVGTPVYKFEGHKAAVLCVQWSPDRSSVFGSA
AEDGFLNVWDHEKVGKKKERGGTRMPNSPPGLFFQHAGHRDKVVDFHWNACDPWTIVSVS
DDGESTGGGGTLQIWRMSDLLYRPEAEVLAELENFKSHILTCTPKS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagggagagaggcaaggcggtccagtcatcggtggacgaccggtacacccagtggaag
tccctcgtccctgtcctctacgactggcttgctaaccacaacctcgtctggccctccctc
tcctgccggtggggtccgcagctcgagcaggcaacatacaagaatcgtcaacgcctatat
ctttctgagcagactgatggcagcgttcctaatactcttgttatagcaaattgtgaagtt
gtcaaaccaagggttgcggctgcagagcatatctcccagtttaatgaagaagctcgctct
ccctttgttaaaaagttcaaaactatcatccatcctggggaggttaacagaattagagag
cttcctcagaacagcaagatagtggcaacacatactgacagtcctgatgtacttatatgg
gatgttgaggcgcagcctaatcgtcatgctgttttaggagctgctgactctcatccagat
ttggtattaacaggacatcaagaaaatgcagaatttgcacttgccatgtgtccttcagat
ccttgtgtactctctggagggaaggacaaattggttgttctgtggagcatacaagatcat
atctccactttagcagagtcagctgctaaatcccctgcaacaccagcaacctcaagtggt
aagcagcctgcaaaagctggtcatgagaaaagctcagacagtcctacagttgggccacga
ggtgtgtatcaggggcatgaggatactgttgaagatgtgcaattctgcccttctagtgca
caggaattctgtagtgtaggtgatgatgcctgcctcattctgtgggatgcccgggctggt
actagcccagccatcaaggttgaaaaagctcacaatgctgatcttcactgtgtcgattgg
aatccacatgatgaaaatcttattttaactggatctgctgataattctgttcgtatgttt
gatcgccggaacctaacttctggtggagttggaacaccagtatataagtttgaaggtcac
aaagctgctgttctttgtgtccagtggtctcccgacagatcatcagtttttggaagtgct
gcagaggatggcttcctcaatgtttgggatcatgagaaggttggcaagaagaaggaacgt
ggtggaacaaggatgcccaattcgcctcctggattattctttcaacatgcagggcataga
gataaagtcgtagatttccactggaatgcttgtgacccgtggaccattgttagtgtctct
gacgatggtgagagtactggtggtggtggtacgctacagatatggcgcatgagtgacttg
ttatataggccagaagcggaggttctggctgagctggaaaatttcaaatcccacattttg
acgtgcacaccaaagtcgtaa
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