Elaeis guineensis (African oil palm): 105033453
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Entry
105033453 CDS
T03921
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A isoform X2
KO
K12856
pre-mRNA-processing factor 8
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105033453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egu03041
]
105033453
Spliceosome [BR:
egu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105033453
Complex C
U5 SnRNP specific factors
105033453
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
105033453
NCBI-ProteinID:
XP_010906579
UniProt:
A0A6I9QCP6
LinkDB
All DBs
Position
1:complement(151956029..151969976)
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AA seq
2363 aa
AA seq
DB search
MWNSGAASSSSQMPPPPPPPVAPPGTTGGSGVPPPPAVQPSYSIPPSPAELEAQLVEKAR
KWHQLNSKRYGDKRKFGFVEAQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFV
PHAVYKLLENMPMPWEQVRNVKVLYHITGAITFVNEIPWVVEPIYLAQWGTMWIMMRREK
RDRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEAIQLELDEEEDSAVYTWFYDHKPLVK
TKLINGPSYRKWHLSLPIMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGG
PKFEPLYRDMEKGDEDWNEFNDINKLIIRQPLRTEYRIAFPHLYNNRPRKVKLGIYHTPM
IMFIKAEDPDLPAFYYDPLINPITSINKVDRREKKVYEEDDEDDFCLPDGVEPLLQSTQL
YTDTTAAGISLLFAPRPFNTRSGRTRRAEDIPLVSEWYKEHCPPSYPVKVRVSYQKLLKC
FVLNELHHRPPKAQKKKHLFRSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNL
NYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQ
LADGLQYIFAHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPM
WRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDV
LDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNV
AHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTT
VHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDN
PHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKR
HLFPNWVKPADSEPPPLLVYKWCQGINNLQGIWDTSDGQCVVMLQTKFEKFFEKIDLTML
NRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLL
GLTRASEIAGPPQMPNEFITYADTKIETRHPIRLYSRYIDKVHILFRFTHEEARDLIQRY
LTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENS
FVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTKDGVWNLQNEQTKERTAIAFLRV
DDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCE
NKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSQQTDVGVTH
FRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQSQNRRLTLEDLEDSW
DRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRT
DVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNR
RFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESVVMD
LCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWPMSKPSLVAESKDVF
DQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGIDLAYNLH
SAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIF
SNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKR
LGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLP
FQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKM
LLKPDKTIITEPHHIWPTLTDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIIL
GAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHGDELIVTTTSPYEQQAFGSKTD
WRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKKFICIADLRTQIAGYLYGLS
PQDNPQVKEIRCIVMAPQWGTHQQVHLPSSLPEHDFLNDLEPLGWMHTQPNELPQLSPQD
VTCHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYL
PTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMRYGVKLGTPRDYYHEDHRPT
HFLEFSNLEEGDTADADREDTFT
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgtggaatagcggagcggcgtcgtcgtcgtctcagatgccgccgcctccgccgccgccg
gtggcgcctcccgggacgacgggagggtcaggcgtccccccgccgcctgcagtgcagccc
tcctatagcataccaccatctccggcggagctggaggcgcagctggtggagaaggccagg
aagtggcaccagctcaactcaaagaggtacggggacaagagaaagttcggctttgtcgag
gcccagaaggaggacatgccccctgagcacgtcaggaagatcatcagagatcatggagac
atgtcctccaagaagtaccgtcatgacaaacgtgtctatcttggggctctgaaatttgtt
cctcatgcagtgtacaagcttcttgaaaacatgcctatgccctgggagcaggttcgtaat
gtgaaagttttgtatcacataactggtgcaatcacatttgtgaatgagattccttgggtg
gttgaacccatatatttagcacagtggggtacaatgtggattatgatgcgaagagagaag
agagaccgaaggcacttcaaaagaatgcgatttcctccttttgatgatgaggaacctcca
ttggattatgcagacaatttattagatgtggatccgttggaggctattcagctggaatta
gatgaagaagaagattctgccgtatatacatggttctatgatcataaacctcttgtaaaa
acaaagcttataaatggtccaagttacagaaagtggcatctttcacttccaatcatggca
actcttcatcggcttgcaggacagctgctctccgatttgattgatcgaaactatttttac
ttgtttgatatggagtcgtttttcactgccaaagcgctgaatatgtgcataccaggaggc
cccaagtttgagccactgtaccgtgatatggaaaaaggagatgaggattggaatgaattt
aatgacattaataaactcattattcgccagccactcagaacagaatacagaatagcattt
cctcatctatacaacaataggccaaggaaagtgaagcttggcatatatcatactcctatg
ataatgtttattaaagccgaggatcctgatttacctgcattctactatgatcctctgatt
aaccccattacttccatcaacaaggttgaccgacgggagaagaaagtttatgaagaggat
gatgaggatgatttttgtcttccagatggagttgaacctctactgcaaagcactcaacta
tatactgatactacggctgctggtatctcattgttgtttgcaccacgcccattcaacacg
agatctggtcgtactaggcgagctgaagatataccccttgtatcagaatggtacaaggag
cactgccctccatcatacccagttaaagttcgtgttagttatcaaaagttattgaagtgt
tttgtattgaatgagttgcatcatcgacctccaaaggcacaaaaaaagaaacacttgttc
cgatcactccaagcaactaaattctttcaaacaacagaactggattgggcagaagcaggt
ttacaagtttgtaagcaaggatacaatatgctaaatctgttgattcacagaaagaatctt
aactatcttcaccttgattataatttcaatttgaaacctgtaaagacactgaccacaaag
gagcggaagaagtcgcgatttggaaatgcattccatctatgtcgtgaaattttgcgactg
acaaagcttgtcgttgatgccaatattcagttccgtctgggcaatgttgatgcctttcag
ttggctgatggcttgcagtatatatttgcacatgttggccagctgactggaatgtaccgt
tacaaataccgactgatgcggcagatcagaatgtgtaaagacttgaagcacctgatttac
taccgattcaatactggtcctgttgggaaaggtcctggctgtggcttttgggcccctatg
tggagggtgtggttgtttttccttcgtggcattgtgcccttgttagaaagatggttgggc
aatttgcttgcacgccaatttgagggtcgccattccaaaggagttgccaagactgttaca
aagcaacgtgttgagagtcactttgacttggaactccgagctgctgttatgcatgatgtt
cttgatgcgatgccagagggcattaagcagaacaaggctaggactattttgcaacaccta
agtgaggcatggcgttgttggaaagccaacataccatggaaggttccaggactgccagtg
cctatcgaaaacatgattcttcgttatgtgaagtccaaggcagattggtggaccaatgtt
gctcactacaatcgagagcgtattagaagaggtgcaacagttgataagactgtatgtaga
aagaatctaggaaggttgactcgtttgtggctaaaagctgagcaggaaaggcaacacaat
tacttgaaagatggtccatatgtcacccctgaagaagcagttgctatctacactacaaca
gttcattggctggagtcaagaaagttttctcctataccatttccacctttatcatacaaa
catgacactaaacttcttatcctggcactagaaaggctgaaagagtcttatagtgtggca
gtgagattgaatcaattacaaagggaagaactgggtctgattgaacaagcctatgacaat
ccacatgaggcattgtcaaggataaagcggcacctgcttacacagcgtgcatttaaagag
gttggcattgagttcatggatttgtatagttacctgattcctgtgtatgaaattgaacct
ctggagaaaattacggatgcatatcttgatcaatatttatggtatgaaggtgacaagcgg
caccttttccctaattgggtcaagcctgctgattcggagccacctcctcttcttgtctac
aaatggtgtcaaggtataaacaacttacagggcatatgggacacaagtgatggacagtgt
gttgtgatgctgcaaacaaagtttgaaaagttctttgagaaaattgacttgaccatgtta
aacaggcttcttcgtttggttcttgaccacaatattgctgattatgtcacagctaaaaac
aatgtggtgttgtcatacaaggatatgagtcatacaaactcatatggtctcattcggggt
cttcaatttgcttcatttgttgtgcaatattatgggcttgtgttagatcttttacttctt
ggtttaactagagccagtgaaattgctggtcctcctcagatgcccaatgagttcattact
tatgcagacaccaaaattgagaccaggcatcctattcggttatattcacgatacattgac
aaagtacatattttgttccgcttcactcatgaggaggcacgagatctgattcagcgatat
cttacagagcatccagatccaaacaatgaaaatatggttggatataataataagaaatgt
tggccaagggatgcaagaatgagactgatgaaacatgatgtcaaccttgggcgaagtgtt
ttttgggatatgaagaatcgattacctcgaagtatcacaacattggagtgggaaaacagc
tttgtctctgtttacagcaaggataaccccaatctgctattcagcatgtgtggatttgag
gtccgcatattgccaaagataagaatgactcaagaggcatttagcaacactaaagatgga
gtttggaacttgcaaaatgagcagaccaaagagagaacagcaatagctttcttacgtgtt
gatgatgaacatatgaaggtgtttgagaatcgtgtgaggcagattcttatgtcctcagga
tcaacaacatttactaagatagtcaacaaatggaatactgctcttattggtcttatgacc
tattttcgtgaagcaactgtgcacacacaggagctattagatctgctggtcaagtgtgaa
aataagatccaaactcgtatcaagattggactgaattcgaagatgcctagcaggtttcct
cctgtcatcttttacacacctaaagaaatagggggccttggtatgttgtcaatgggtcac
attttgatcccacaaagtgatctaaggtatagtcaacagacggatgttggggttacacat
ttccgtagtggtatgagccacgaggaggatcagcttattccaaacctttaccgctacata
cagccctgggagagcgaattcattgattcacaacgtgtttgggcggaatacgctttaaag
aggcaggaagcacaatcacaaaatagacgattaacccttgaagatcttgaggattcctgg
gatagggggatacctcggatcaacacccttttccaaaaagatcgtcatactctggcatat
gacaaagggtggagagtacgaactgattttaagcaatatcaagtgttgaagcaaaatcca
ttttggtggacccaccagcgacatgatggcaagctttggaacttgaataattatcggact
gatgtcatccaagcacttgggggagtcgaggggattctagaacacacattatttaaaggg
acatatttcccaacttgggaaggtctcttttgggagaaggcatcaggatttgaggagtcc
atgaaatataagaagcttacaaatgcacaacggtctgggctgaatcaaatcccaaaccga
aggttcactttgtggtggtctcctaccataaatcgtgcaaatgtgtatgtaggcttccag
gtgcaacttgatcttacaggaatattcatgcatggaaagatacctacattgaagatatct
ttgattcagatatttcgtgctcatctttggcaaaaggttcatgagagtgttgttatggat
ctctgccaagttctggatcaggagttggatgcattagaaattgaaactgtacagaaagag
accatccacccaagaaagagttacaagatgaacagttcttgtgctgatattcttcttttc
gctgcacatagatggccaatgtctaaaccaagcctagttgctgagtcgaaagatgtgttt
gatcagaaagcaagcaataaatactggatagatgtgcaacttcgttggggagactatgat
tcacatgatatagaacgttacacgagggcgaaatttatggattacacaactgacaacatg
tccatatatccatctcccactggtgtgatgattggaattgatttagcatataatctgcac
tcagcctttggcaattggttccctggttcaaagcctttgctggctcaagcaatgaacaaa
ataatgaagtcaaatccagcattatatgttttgagggagcggataaggaagggtctacaa
ctgtattcatctgaacctactgaaccatatctttcatctcaaaactatggggagatcttc
agcaaccaaatcatatggtttgttgatgacacgaatgtatatcgtgttacaatccataaa
actttcgagggaaatctcactacaaaacccatcaatggtgccatctttattttcaaccca
aggacagggcagctgtttctcaaggtgatccacaccagtgtgtgggcagggcaaaagcgt
cttgggcagttggcaaaatggaaaactgcagaggaggtggctgctcttgtgcggtcgttg
ccagtcgaagagcaaccaaagcaaattattgtgacccgtaaagggatgttggatcctttg
gaggtccatttgcttgatttccccaacattgtgatcaaggggagtgagcttcagttgcct
ttccaggcttgcttgaaaattgagaagtttggcgatttgattctgaaggctactgaacct
cagatggttcttttcaatatttatgatgattggttgaaaagtatttcatcgtacactgcc
ttctctcgtcttatcttgattctacgggcactccatgtgaacaacgagaaggcaaagatg
ttactgaagcctgacaaaacaatcatcactgaaccacaccatatctggcctacacttaca
gatgatcagtggatgaaggtggaagttgcactgagagatctcatactttctgactatgct
aagaagaacaacgtgaacacttctgcgctaacacagtctgaaattcgtgatataattctt
ggtgctgagataactccaccctcacagcagagacaacagattgctgaaattgaaaaacag
gccaaagaagctagtcaattgactgcagttacaacaaggacaacaaatgtgcatggggat
gaacttatagtcaccacaaccagtccctatgaacaacaagcatttggttctaaaaccgac
tggcgtgttagggctatatcggcaacaaatctttatcttcgtgtcaatcatatttatgta
aactcagatgacattaaggagactggatacacttacatcatgcctaagaacatattaaag
aagttcatctgcatagcagatctacgaacacagattgcaggatatctatatgggttaagc
ccccaagataatccacaggtgaaggagatccgttgcatagtcatggcaccacaatggggg
actcatcagcaggtccatctcccatcatctcttccagagcatgatttcttgaatgacctg
gagccattgggatggatgcatactcagcctaacgagcttccccaactctctcctcaggat
gttacatgtcatgcgcgaattctagagaacaacaaacaatgggatggcgagaagtgcatc
attttgacatgtagcttcactccaggatcctgctcattgacagcatataaactcacgcca
tcaggttatgaatggggccgtgtcaacaaggacactggaagcaatccacatggctacctg
ccaacacattatgaaaaggtgcagatgcttctcagtgaccggttcttgggattctacatg
gttccagataatggtccctggaattacaacttcatgggggtaaagcacacagtaagtatg
cgatatggtgtaaagcttggaacacctcgagactactatcacgaagaccataggccgaca
cattttctcgagttcagtaatttggaagagggggacactgcagatgcagacagagaggat
acctttacgtag
DBGET
integrated database retrieval system
