Elaeis guineensis (African oil palm): 105033549
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Entry
105033549 CDS
T03921
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105033549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105033549
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105033549
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105033549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
105033549
NCBI-ProteinID:
XP_010906714
UniProt:
A0A6I9QD16
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Position
9:complement(31746699..31788164)
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AA seq
902 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALMDARKVIEREMERFKVCEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGDLESQIDNFEAEVEGLSVKKGKTRPPRLTHLETSISRHRA
HIIKLELILRLLDNDELSPDQVNDVKDFLEDYVERNQEDFDEFSDVDELYSTLPLDKVEA
LEDLVSLGPSSLVKGVSSVSVATAVLGSKNSVATSSTQAALSSTASQHTAQDQGEETASQ
DSNSDTAPRTPPSKSGAMGSLVSAASPSISSGTPAGLTSTATSNVSGRPLAGGPTVAAIL
SGPPSARGVTDNSSAATSASITTSSTVKEDDNMIFPGRRSSPAIPEIGIGRGISRGISNQ
VPITAPISLSSGSAVSGNGALGSVPAVSDLAKRNMLNVGSGSLSQPLVSPLSNRILLHQA
SKTNDGTNSNDSNSVSEGAVIGGRVFSPSVSGVQWRPPSATFQSQNETGQFRGRLEIAPD
QREKFLLRLQQVQQQGHSPLLGGPHVPSANDKQLSAQQQSVLLQQLNSQGSSISPQVGLG
LGVQGPGLVSVSSASQQQATSILQQSSPHPVISTGPKDGDAGHLKVEDQNLQNLSDDLNI
ETATSSAFNKTVNDEELKAPYMGTGSSSLTEGNQLPRDTDLSPGQPLQPSQSSASLGVIG
RRSVSDLGAIGDNLGGSAGNSGGMHDQIYNMQMLEAAFYKLPQPKDSERVKSYVPRHPAV
TPASYPQTQAPIIDNPAFWERMGFEAIGTDTFFFAFYYQQNTYPQYLAARELKRQSWRYH
KKYNTWFQRHEEPKVTNDEYEKGTYVYFDFHIADDGSQHGWCQRIKTEFTFEYNYLEDEL
VV
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgagccggaaactccagggcgagatcgatcgggtcttgaagaaggtccaggag
ggcgtcgaggtcttcgacagcatttggaacaaggtttatgacacggagaacgccaatcag
aaggagaaattcgaagcggatttaaagaaggagatcaagaagctgcagcgatatcgagat
cagatcaagacatggatccagtcgagcgagataaaggacaaaaaggttagtgcctcttat
gagcaggctctcatggatgctcgcaaggttattgagcgtgaaatggaaaggttcaaggtc
tgtgaaaaggaaactaaaacaaaagccttctccaaagaagggttgggccaacaaccgaaa
actgatccaaaagaaaaggctaagtcagagacaagggactggctcaacaatgtggttgga
gatttggaaagtcagatcgataactttgaagcggaggttgaagggctttctgtaaagaaa
ggaaagacaaggccacctcgactgacacatttggagacatctatttcaaggcacagggct
catataataaagctggagttgatcttgagactgttagataatgatgagttgagtcctgat
caggtcaatgatgttaaagattttctagaagactatgttgaacgcaatcaggaggatttt
gatgaatttagtgatgtcgatgagctctacagcactttacccttggataaagttgaagca
cttgaagatttggtgtcacttggtccttccagtcttgttaagggtgtcagttctgtttct
gttgctactgcggttttaggttcgaagaattctgttgcaacttcctctactcaggctgct
ctgtcatcaactgcctcacaacatactgctcaggaccaaggtgaagaaacagcttctcag
gacagtaattctgacacagctcctagaacaccaccttccaaaagtggagccatgggatct
ttggtatcagcagcttccccgagtatcagttcggggacacctgcaggtcttacttctact
gccacttctaatgtttctggaaggcccttggctggtgggcctactgttgcagctatactc
tctggtccaccaagtgctcgaggtgttacagataactcatctgcagctacgtctgcatct
attactacatcaagtaccgtgaaggaggatgataacatgatcttccctggtcgtagatca
tctccagccatccctgaaattggaattgggagaggtattagccgagggatatccaatcaa
gtacccattactgctccaataagtttaagctctggtagtgctgtttcaggcaatggagca
cttggttcagttcctgcagtctctgatttggctaagcggaacatgttgaatgttggaagt
ggcagtctttcacagccattagtttctcctctaagtaacagaatcctattgcatcaggct
tcaaaaactaatgatggaactaattcaaatgattctaatagtgttagtgagggtgcagtt
attggtggaagagtcttttcaccttcagttagtggagttcaatggagacctccaagtgca
acttttcagagtcagaatgaaacaggacagtttcgtggacgactggagattgctcctgac
cagagggagaaatttctgctgcgactgcaacaagtgcagcaacaaggccacagtcccctt
cttggtggtccacatgttcccagtgcgaatgacaagcaattatctgcacagcagcaaagt
gtacttttacaacagcttaattctcaaggctcttctatttcacctcaagttggtttagga
cttggtgttcagggaccaggccttgtttctgtttcatcagcctcacaacagcaggcaacg
tcaattctacaacaatcttccccacatcctgtgatttcaaccggaccaaaagatggagat
gctggacacctgaaagtagaagaccagaacctgcagaatttgtctgatgatctgaatatt
gaaactgccacaagttctgctttcaacaagactgttaatgatgaggagttaaaggcacca
tacatgggcacaggttcatcctctttgactgaaggtaatcagttacccagagatactgat
ctctcacctgggcaaccattgcaacccagtcagtcttcagctagccttggtgtaattggt
cgaagaagtgtctctgaccttggtgccattggagataaccttggtggatcagctgggaat
tctggcggaatgcatgatcaaatctataacatgcagatgcttgaagctgcattttacaaa
cttcctcagcccaaggattccgaacgtgtaaagagctatgttccgaggcaccctgcagtg
actcctgctagctatcctcaaactcaggctccaatcatagacaatccagccttctgggaa
cgaatgggttttgaggcgattggcactgataccttcttcttcgcattttactatcaacag
aacacttacccgcaatacttagctgcaagggaattgaaaaggcaatcatggagatatcat
aagaaatataacacttggtttcaacggcatgaggagccaaaagttacaaatgatgaatat
gagaagggaacatacgtgtactttgatttccatattgcagatgatggttcccagcatgga
tggtgccaaaggattaagactgagttcacatttgaatataattatcttgaggatgagctt
gttgtatag
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