Elaeis guineensis (African oil palm): 105033669
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Entry
105033669 CDS
T03921
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105033669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105033669
03036 Chromosome and associated proteins [BR:
egu03036
]
105033669
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105033669
Coactivators
SAGA/TFTC/STAGA complex
105033669
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105033669
STAGA complex
105033669
TFTC complex
105033669
SAGA complex
105033669
SLIK complex
105033669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_Vps41
Ge1_WD40
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_DCAF12
WD40_like
Beta-prop_VPS8
LisH
Cytochrom_D1
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
105033669
NCBI-ProteinID:
XP_010906860
UniProt:
A0A6I9QDD2
LinkDB
All DBs
Position
8:complement(23024525..23056789)
Genome browser
AA seq
657 aa
AA seq
DB search
MEEEELQKAVYAYLRKKGFRQTELVLQEEQNRLSSSAQSDLAVSRLDNDPARYHDGYSKL
RSWAYSSLDLYKHELLRVLYPVFIHCFMDLVAEEHMQEARTFFHTFREDHELMHLRDLQK
LEGILSPSHLEEMELARSLRQNKVKIKLCEYSYDLLLQYLQKTQSVTMLGIINEHINFEV
SAGQPSSISDDVDVVALVGSSQDIAKQINQKEVRWGLLEDSVEERLERPVSDSEKPEGEN
KEVDPEDSKQKRSVEGGKQGVSVKKLKKDKLVGATGKNIRSETSTVSIAPRVKPELTLPV
MTTEVEQSILEDLRNRVQLSSLALPSISFYTFINAHNSLNCSSISHDGSLVAGGFSDSSL
KVWDMSKIGRPTKTSNSQGENESVESEHLLGLEEGKRSYTLFQGHAGPVYSATFSPFGDF
LLSSSSDSTIRLWSTKLNSNLVCYKGHNYPVWDVQFSPVGHYFASCSHDRTARIWSMERI
QPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMVLSLAM
SPDGRYMASGDEDGTIMMWDLSSGRCVSPLMGHNSCVWTLAFSCEGTLLASGSADCTVKL
WDVTASMKVPRMEENKASSTNRLRLLKALPTKSTPVYTLRFSRRNLLFAAGGLSKQA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggagctccagaaggccgtgtacgcttatctgaggaagaaaggcttcagg
cagaccgaactcgtccttcaagaagagcagaaccgcctttcctcctccgctcagtccgat
ctcgctgtctccagattagacaatgatccagcaagataccatgatggatatagcaagcta
agatcgtgggcgtatagttcattggatttgtacaagcatgaacttctccgtgtgctctat
ccagtttttatacactgcttcatggatcttgtggcagaagagcatatgcaggaagctcgg
acattttttcatacttttcgtgaagaccatgaactgatgcatttacgggaccttcaaaag
ttggaaggcattctctcaccttcacatttggaggagatggagcttgctcgttctttgcgg
caaaacaaagttaaaataaagctgtgtgagtattcctacgacctcctgctgcaatacctt
cagaagacacaatccgttaccatgcttgggataatcaatgaacatataaattttgaagta
tctgctgggcagccttcctcaatttctgatgatgtggatgttgtagccttagtggggagt
agccaggatatagctaaacagataaatcagaaggaagtacgctgggggttgcttgaagat
tcagttgaagaacgtttggagagaccagtttcagactccgagaagcctgagggtgaaaac
aaagaggtggacccagaagatagcaagcagaaaaggtctgtggagggaggaaaacaaggt
gtttctgtcaagaagttgaaaaaggacaagctcgttggtgcaacggggaaaaatatccgc
tctgagacaagcacagtctccatcgctcctcgagtgaaaccagagcttactctacctgtg
atgaccactgaagtagaacaatctattctcgaggacttaagaaatcgagtgcaattaagt
agcttggcattaccttctatcagcttctataccttcattaatgcacataacagtttaaat
tgttcatctatttctcatgatgggtcattggttgctggtggattttccgactcttctctg
aaggtttgggacatgtcaaagattggtcgacccaccaaaacatccaattcgcagggggaa
aatgaatctgttgaaagtgagcatttgctgggactggaagaggggaaaagatcgtacaca
ttatttcagggtcatgccgggcctgtttattcagctacgtttagtccttttggggatttt
cttttgtcttcatcatcagactcaacaatccgattgtggagtaccaagctgaattcaaat
cttgtttgctacaaaggtcataattacccagtatgggatgttcaatttagtcccgttggc
cattattttgctagttgttcacatgatcggactgctagaatttggtcgatggagagaatc
caacctctgcggataatggctggacatctttctgatgttgattgtgtacaatggcatgca
aattgtaattacattgcaaccggatcaagtgacaaaactgtcagactttgggatgtacaa
agtggggaatgtgtacgcattttcattggtcataggagcatggtattgtcattggcaatg
tctcctgatggacgatatatggcttctggtgatgaagatggtaccatcatgatgtgggat
ctctcaagcggtcggtgtgtttcaccattaatgggacataactcctgtgtgtggacactt
gctttcagttgtgaggggacattgcttgcttctggatctgctgactgtacggttaaatta
tgggatgtgaccgccagcatgaaggtgccacggatggaggagaacaaagctagcagcacg
aaccgactgagattattgaaagctctcccgaccaaatctactcctgtctacacattacgg
ttctctcggaggaatctcttgtttgctgcggggggactttcaaaacaggcatga
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