Elaeis guineensis (African oil palm): 105033702
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Entry
105033702 CDS
T03921
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7
KO
K14409
protein SMG7
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105033702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105033702
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105033702
mRNA cycle factors
Common to processing body (P body) and stress granule
105033702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
105033702
NCBI-ProteinID:
XP_010906901
UniProt:
A0A6I9QC38
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All DBs
Position
1:18659205..18673695
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AA seq
983 aa
AA seq
DB search
MMTVPMNSSSAPSSRERVQSLYNKNIELENGLRKSAKSKVPSDPNAWLQMRENYEAIILE
DHEFSEKHEIEYALWQLHYRRIEEFRAHINAAASSGGVTTLQVKSPVQPDRIKKIRAIFK
GFLLEATGFYHDLILKIRTKYGLPLDYFSDAPESQITLEKDEKNSFEIKKGLISCHRCLI
YLGDLARYKGLYGEGDSVSRDYAAASGYYLQAASLWPSSGNPHHQLAILASYSADDLLAL
YRYFRSLAVNNPFLTARDNLIIAFEKNRQNCSQLPGSSKVSSARTLPSRATGKGRGRGDF
RPAAKETKVESTRIKERELSTPEVFKAFLTRFIRLNGILFTRTSLETFGEVFALVISDLL
ELLSSGPEEKLNFGQDAAENGLVIVRLIAILIFSVHNAKRESEGQSYAEILQRTVLLQNA
FTAAFDFVGHILKRCTQLHDAASSYLLPGILVFMEWLACHSDIAAGIDIEEKQAAARSFF
WDQCVLLMNKLLLSGLADGDEDKTCFLEMSWYDDGESGSMLALWEDFELRGFSPLAPAQL
ILDFSRKYLLENDGSNKENSARVKRILAAGRALMNVVRIGQQEIYYDSKLKKFVIGTKPP
AYEDLDASKLDDFKVVGPVGNMGMMQSNTANLQAKQSWGQLYADGEEEDEVIVFKPMAVE
KYANMSMSEANAFGNIQPAQSSSLGDQSAYGGLLSAAFSNSQVSAALNGISRPPITMCSV
SQPPAQHITPSTSKWSTEQESFIMGGLKNLSIAENDIYANPGLLSGRSSLQPTSFSPSLS
ATSNLNTSSSNQLSGHINAGKAVIPAEVDSIIPLEANSDGADMKVAASLPASRKIPVSRP
ARHFGPPPGFSNPAKQLEDSNFKFTIKEEQPQMDDYSWLDGFKTSSISGMGMENSINRAT
HIYPQVTASNSNSVSGPITFPFPGKQFSTVQPEMAYEKKWQDFQLFEHLKLDAEKQLPQA
SQQSALLPEQYQAPSLWSSHFFV
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgatgacggtaccaatgaatagctcatctgctccctcgtcaagggagcgtgtacagagt
ctttacaacaagaatattgaattggagaatggattgaggaagtcagcaaagtcaaaagtc
ccttcagatcccaatgcatggcttcaaatgcgtgaaaactacgaggcaataattcttgaa
gatcatgaattctctgaaaaacatgagatagagtatgctttatggcagttacactacagg
aggattgaggagttccgagcacacattaatgccgcagcatcctcaggaggagtaaccaca
ttacaagttaaaagtcctgttcagcctgatcgaataaagaaaatacgtgctatttttaaa
ggttttcttttagaggcaactggattttatcatgatttaatacttaagatcagaacaaaa
tatggcttgcctctggattatttttctgatgctcctgagagccaaattacactggaaaaa
gatgaaaaaaactcttttgagataaagaaagggctgatctcttgtcaccgctgtctgata
tatttgggtgatcttgctcgttacaaaggactttatggggaaggggactctgtcagtcga
gattatgctgctgcttctggttactacctacaggctgcttccctttggccttcaagtggc
aatccacatcatcagcttgcaatacttgcatcatattctgctgatgatcttctggcactc
tatcggtattttcggagcttggcagtgaataatcctttcttaacagcaagggacaatttg
attattgcatttgaaaagaaccgccaaaattgttctcagctccctggtagttccaaagtt
tcttctgctaggacattgcctagtcgagcgactgggaagggaagaggacgaggagatttc
aggcctgcagctaaagagacaaaagtcgaaagcactcgaatcaaagaacgagaacttagt
acccctgaggtttttaaagctttcttgactcgatttattcgacttaatggcatcctcttc
acacgaacaagcttggaaacttttggagaagtatttgctctggtcatcagtgatcttctt
gagctgctatcttctggacctgaggagaagctaaattttggtcaagatgctgcggaaaat
ggactggtcattgtgaggcttattgccattcttatattctcagttcataatgcgaagagg
gagtctgaagggcaatcatatgctgaaattttgcagcgtactgtgttgcttcaaaatgca
tttacagctgcctttgattttgtgggacatatcctgaaaagatgcacacaattgcatgat
gctgcatcaagttatcttttaccaggtattctagttttcatggagtggcttgcatgccat
tcagatattgcagctggcattgatattgaagaaaagcaagctgctgcaaggtcattcttt
tgggatcagtgtgtattactgatgaacaaactactgctgagtgggcttgctgatggagat
gaggataaaacctgctttttggaaatgagctggtatgatgatggggaaagtggtagtatg
cttgcattgtgggaggactttgagttgagagggttttcacccttagcgccagcacagctc
atcttagacttctcaaggaagtatttacttgaaaatgatgggagcaacaaggagaacagt
gctcgtgtgaaaaggattcttgcagcaggacgggctcttatgaatgtcgttcggattggt
caacaagaaatttattatgactcaaaactgaagaaatttgtaataggtaccaagcctcct
gcatatgaagatttagatgcatccaagttagatgatttcaaagtagtaggtccagttgga
aatatgggaatgatgcaatcaaatacagctaatctacaagccaaacaatcttgggggcag
ctatatgcagatggagaagaagaagatgaagtaattgttttcaagcctatggctgtggaa
aagtacgccaacatgagtatgtcagaggcaaatgcttttggaaacatccagcctgcacag
agttcttccttaggtgatcagtcagcttatggtggtttgctttctgctgctttcagtaat
agtcaggtgtcagctgctctaaatggcatttcgcgaccacccataactatgtgcagtgtc
tctcagcctcctgctcagcatatcactccaagcacttcaaagtggtctacggagcaagag
tcatttatcatgggcgggcttaagaatttgagcattgcggaaaatgacatatatgctaat
ccaggtttgctaagtggtcggagtagtttgcagcctacttcattttccccatcactttct
gcaacttccaatctgaataccagctctagcaatcagttatctggtcatataaatgcgggc
aaagctgttataccagcagaagttgattccataattcctttggaagcaaattctgatggt
gcggatatgaaagttgcagcatctttgccagcttcgaggaaaatccctgttagccggccg
gcaaggcactttggaccaccacctggatttagcaaccctgctaagcaactggaggactcc
aattttaaatttactatcaaggaagaacagcctcagatggatgactatagctggctagat
ggatttaaaacatcatcaatcagtggtatggggatggaaaattccatcaatcgtgccacg
catatatatccgcaagttactgccagtaatagtaacagtgtttctggtcctattaccttt
ccttttcctgggaaacagttttctactgttcagcctgagatggcatatgagaagaagtgg
caagatttccagctttttgagcatttgaagttggatgcagaaaagcagcttccccaagca
agtcagcagtctgcattgctaccagagcagtatcaagcaccatcgttatggtctagccat
ttctttgtgtga
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