Elaeis guineensis (African oil palm): 105034003
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Entry
105034003 CDS
T03921
Name
(RefSeq) ubiquitin receptor RAD23d isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03420
Nucleotide excision repair
egu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105034003
09124 Replication and repair
03420 Nucleotide excision repair
105034003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
egu03051
]
105034003
03400 DNA repair and recombination proteins [BR:
egu03400
]
105034003
Proteasome [BR:
egu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
105034003
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105034003
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
UBA_RAD5A
CUE
Dsc3_N
TECR_N
Rad60-SLD_2
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
105034003
NCBI-ProteinID:
XP_010907325
UniProt:
A0A6I9QEG3
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Position
3:complement(65520229..65613429)
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AA seq
391 aa
AA seq
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MKVFVKTLKGTNFEIEVKPEDTVADVKRIIESTQGQSVYPSEQQMLIHQGKILKDDTTMN
DNKVSENNFIIIMLSKTKGSTSGASTTTSAPANQAPPTNTVPPVPSTPASAPPHAPATML
ASVPTSAPTPTATAAPASAVTVSTEVDAYGQAASNLVAGGNLEQTIQQILDMGGGTWERD
TVVRALHAACNNPERAVEYLYSGILEHVEASPLAQAPASGQAASSPVQASQPVQSAVPSS
GPNTNPLDLFPQGLPNMGSNAGGGSLDFLRNSPQFQAFKALVQANPQILRPMLQELGKQN
PLVMRLIQEHQDEFLCLINEPAEGGESNLLGQLAAAMPQALTVTPEECEAIERLEAMGFD
RALVLEVFFACNKNEELAANYLLDHMHEFED
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcttcgtgaagactcttaagggcaccaacttcgagatcgaagtcaagcccgaa
gacactgttgctgatgttaaaagaattatcgagagtactcaagggcagagtgtttaccca
tctgaacagcagatgctcatacatcaagggaaaattctaaaggatgatacaacaatgaat
gataataaagtttctgaaaataatttcataattataatgttgagcaagaccaagggctcc
acaagtggagcttcaaccactacaagtgcacctgcaaatcaggccccacccactaatacc
gtgccacctgtcccttcaacaccagcatcagctccacctcatgcacctgccacaatgctg
gcttcggttcccacaagtgcacctactccaactgccacagctgccccagcttctgcagtt
actgtgtccactgaagtagatgcatatggtcaagcggcatctaatcttgttgcgggtggt
aacttggaacaaaccatccaacagattcttgacatgggtggggggacctgggagagggac
actgttgttcgtgctttgcatgctgcatgtaacaaccctgagagggctgtcgaatatttg
tattcaggtatccttgaacatgttgaggcctcacccttggcccaagcgcccgcaagtggg
caagctgccagttccccagtccaggcttcacaacctgttcagtctgcagttccttccagt
ggacctaatactaatcctttggacctctttcctcagggtcttccaaacatggggtcaaat
gctggcggcggcagccttgattttttacgtaatagtccacagttccaagcctttaaggca
ttggtgcaggctaaccctcaaatcctacggcccatgcttcaagagctggggaagcaaaat
ccactagttatgaggctcattcaagaacatcaagatgaattcctttgcttgatcaatgaa
cctgctgagggaggagaaagcaatttattaggtcagttagctgccgcaatgcctcaagcc
ctgacagtcactccagaggaatgtgaagccattgaacgtcttgaggcaatgggcttcgat
cgggcactcgtgttggaggtcttctttgcctgcaacaagaatgaggagctggcagcaaac
tatcttttggatcatatgcatgagtttgaagactga
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