KEGG   Elaeis guineensis (African oil palm): 105035197
Entry
105035197         CDS       T03921                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03030  DNA replication
egu03410  Base excision repair
egu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105035197
   03410 Base excision repair
    105035197
   03420 Nucleotide excision repair
    105035197
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:egu03032]
    105035197
   03400 DNA repair and recombination proteins [BR:egu03400]
    105035197
Enzymes [BR:egu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     105035197
DNA replication proteins [BR:egu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    105035197
DNA repair and recombination proteins [BR:egu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      105035197
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf_DPOE_2 zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 105035197
NCBI-ProteinID: XP_073099549
LinkDB
Position
9:34654321..34713428
AA seq 2209 aa
MNSGGKWRERSSRNPSKQKLRLNAEEVLERKLGFDLFTEGEKRLGWLLTFAPSSWEDQDT
NKIYSCVDLYFVTQDGSTFKVKYRFRPYFYAATKEKMELEVEAYLRRRYEGEIADIEIVE
KEDLDLKNHLSGLHKAYLKLSFDTVQQLMHVKNDLMHVVERNQAKSDAAEAFESIYNGKS
KERPQDYIDCITDLREYDVPYHVRFAIDNDVRCGQWYDVNVSSAGILLEKRADLLQRAEV
HVCAFDIETTKLPLKFPDAEYDLIMMISYMIDGQGYLIINRECVGEDIEDLEYTPKAEFE
GCFKVRNVKNEEELLKVWFSHMQDVKPGIYVTYNGDFFDWPFIEKRAAHHGLKLSEEIGF
HCDNNQGECRAXFSCHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFA
MEQPQMMASYSVSDAVATYYLYMTYIHPFIFSLATIIPMTPDEVLRKGSGTLCEMLLMVQ
AYKANIICPNKHQDDPEKFYNNRLLESETYIGGHVECLESGVFRSDLPTKFQLEPSAYEQ
LIRNLDRDLQYAITVEGKMDIDSILNYEDVKNAILEKLIFLRDHPMREECPLIYHLDVAA
MYPNIILTNRLQPPSIVSDVVCTACDFNRPGKNCLRKLEWVWRGEIYMAKKSDYYHIKKQ
IESELVENGEGQAIKPFLDLPKSEQQLKLKERLRKYSQKAYKRVLDKPITELREAGICMR
ENPFYVDTVRSFRDRRYEYKGLNKVWKGKLAEAKSSGNSIKIQELQDMVVLYDSLQLAHK
CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWCALP
GSFPENYSFRTKDPNRKLTISYPCVMLNVDVARNNTNDQYQTLEDPITKTYTTHSECSIE
FEVDGPYKAMILPASKAEGILIKKRYAVFNHDGTLAELKGFEIKRRGELKLIKVFQAEVF
DKFLHGLTLEECYAAVASVANRWLDLLDNQGIDIADSELLDYISESSTMSKSLSDYGEQK
SCAVTTARRLADFLGDTMVKDKGLHCQYIVAQEPRGTPVSERAIPVAIFETDAEIAKFYL
RKWCKISSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLHKKVR
EKEDRFRQRKLVDIFSTVNKDETIMQDEMNVGDMEDLIAKKDVSKGPRPVVHSYEVNKEN
YSSKQSCPEAGLILSHKQQNATLCRPLMSLSQNGTCGESVDRNIDYQAWLEVKKRKWKDT
REERKRRRLGITKMSQQSAGAAKLPASMFNYRRGQDRNGXSSFFRRQELALVQSHWQIIQ
LVPSTQPGRFFAWVVADGIMQKVPIDVPKVFYLNTKAPVTEEFPGRCVKKILPHSRPSFN
LIEVVINEDQFRAAKKKLAAHLADPEVEGIYETNMPLEFNAILQIGCVCKVDKAARLRNL
QDGWNLSELHMKTTAECSYLEQTISXFYLYHSMSEGRAIYVIYFPVSYTIFAVVVNPFQN
KELSSSLLERLFREACQTLSVEPPMAGSATYKVEYVRSIEAGSKXLQRTLIDYRHRHPGP
AIGVIECPNVQVIRSGMRILDDFPCISIPCNARDSNYQALGWQVMAGKIGMQRCAASSQW
FSERILLSRYAHVPLGNFELDWLLFTVDVFYSRVLRDQQQVLWISDDGIPDLGGTYEADT
CFADEVIQPALTYPGAYRRVTVELKIHHLAVNALLKSNQVDEIEGGSIFGFDHEMHHGPV
VNETDFDEASACAPAFQVLKQLIQRCISDAVASGNVFADAILQHLYRWLCSPLSKLHDPA
LHRVLHKVMKKLFALLLAEFRKLGATIIFANFSKIVIDTGKIDLSAARAYCDCLLKTLQT
RDLFEWIELEPLHFWHSLLFMDQYNYGGIQAKSTTLSHTDNLEDEAEVDIVSSWNIAEYL
PKITQDHFVLIVSEFLYIPWKHLKEQVATRTTMRDDNACTQSITITAAEALEVCVTEYLK
DQISNYFTEKLLRIVRDTLHHFKGRNKIDKNEPAYHGLSQSTDSQVHKGDAALEFIKHVC
AVLALDQNVQHDILRMRKNLLKLVHVKEFAPEAQFNDPSPSFILPNVICSYCNDCRDLDL
CRDSALSDNEWRCSVPQCGQSYNREQMENSLLQIVRQREKLYHLQDLVCLRCRQVKAAHL
AEQCVCGGLFRCKEDSFEFLRKMQVFLNIAANQKFQLLDDCTSWILEVR
NT seq 6630 nt   +upstreamnt  +downstreamnt
atgaatagcggcggcaaatggagggaaaggtccagccggaatccatcgaagcagaagctc
cgcctgaacgccgaggaggttcttgaacgcaagctagggttcgatctcttcaccgaaggc
gaaaagaggctcggatggttgctcacctttgcaccgtcatcatgggaagatcaagatacc
aacaagatctacagctgcgtagatctttactttgttactcaggatggatctacattcaaa
gtaaagtacaggtttcgaccttatttctatgccgccaccaaggaaaagatggagctggaa
gttgaggcatatctcagacgtcgatatgaaggagaaattgctgatatagagattgtggag
aaagaggacctggatctgaaaaaccatctatctggcttacataaagcatacttaaagctt
agctttgatactgtccaacaattgatgcatgtaaagaatgaccttatgcatgtcgttgaa
aggaaccaagcaaaatcagatgcagctgaagcatttgaatccatatataatgggaaaagc
aaagaaaggccacaggattatatagattgtatcactgatctacgtgaatacgatgttccc
tatcatgttcgttttgcaattgataatgatgttagatgtggacagtggtatgatgttaat
gtatctagtgctggcattttgcttgaaaaaagagccgatcttcttcagcgtgctgaagtt
catgtttgtgcatttgatattgagacaacaaagcttcctctgaaatttccagatgctgaa
tatgatctgataatgatgatatcatatatgatagatggacaaggttacttgataatcaat
cgagagtgtgttggggaagatattgaagatttggaatatacccctaaagcagaattcgaa
ggatgctttaaagttagaaatgtgaaaaatgaggaagagcttctcaaagtgtggttttcc
cacatgcaagatgtgaaacctggtatttatgttacctataatggtgatttctttgattgg
ccattcatagagaaaagagctgcccaccatgggcttaaactgagtgaggaaataggcttt
cattgtgacaataatcaaggagaatgccgtgctnaattttcttgccatcttgactgtttt
gcttgggtcaaacgtgacagttatcttcctcaaggaagccatggccttaaggctgttaca
aaggctaagttgggttatgatccattggaggtgaatcctgaagacatggttcgctttgcc
atggaacaacctcagatgatggcttcttattctgtatctgatgcggtggcaacttactac
ctgtacatgacatacattcatccatttattttctctcttgcaactataatacctatgaca
ccagatgaggtcttgcgcaagggaagtggaacactttgtgaaatgcttctcatggtccag
gcttacaaggcaaatattatttgtcctaacaagcaccaagatgatccagagaagttctac
aacaaccgtcttttagaaagtgagacatacatagggggccatgttgaatgccttgaaagt
ggtgtttttagatctgatcttccaactaaatttcagcttgagccatctgcatatgagcaa
ttgatcagaaatcttgatcgtgatctgcaatatgccataacagttgaggggaaaatggac
attgattcaatcttgaactatgaagatgtgaaaaatgctatactggaaaagcttatcttc
ttgcgagatcatccaatgcgtgaggagtgtcctcttatttatcatcttgatgttgccgca
atgtatccaaacattattttaacaaacagacttcagccaccatcaatagtctcagatgta
gtttgcacagcatgcgatttcaatcgtccaggaaaaaattgcctgcgtaagcttgaatgg
gtttggcgaggggagatctatatggcaaagaaaagtgattattatcatataaagaagcaa
attgagtcagaactggtggaaaatggtgaaggtcaggcaataaagccctttcttgacctc
cccaaatcagaacaacagttgaagctgaaagaacgcttgagaaaatatagtcagaaggcg
tataaaagggttcttgacaagcccatcacggaacttagagaagctgggatatgcatgcgt
gaaaatcctttctatgtggatactgttaggagctttcgggatagaaggtatgagtacaaa
ggtcttaataaggtatggaagggaaaactggcagaggcaaaatccagtgggaattctatt
aagattcaggagttgcaggatatggttgttctatatgattccttacagcttgctcataaa
tgtatacttaactcgttttatggatatgtcatgcgcaagggcgcaagatggtactcaatg
gaaatggctggagttgtcacatacactggtgcaaagataattcagaatgctcgtttactt
gtcgaaaagatcgggaggcctctggaattggacacagatggcatctggtgtgctcttcct
ggatctttccctgagaattattccttcagaacaaaagatccaaacaggaaactgacaatc
tcatatccatgtgttatgcttaatgtggatgttgcaagaaacaatactaatgatcagtac
cagacacttgaagatcctattactaaaacatatacgacccacagtgaatgctccattgaa
tttgaagtggatgggccatataaggcaatgatcctcccagcttcgaaggcagaagggatc
ctgatcaagaagcggtatgctgtttttaatcatgatggtacactagcagagctcaaaggt
tttgagattaaacgtaggggtgagctgaagctcataaaagttttccaggcggaggtcttt
gacaaatttctccatggattaaccttagaggaatgctatgcagctgttgcttcagttgca
aaccgctggcttgatctgttggataatcaaggaatagatattgctgacagtgagttgctt
gattacatatcagagtcaagcacgatgagtaaatctttatctgattatggagaacagaag
tcatgtgctgtgactactgcaagacgacttgctgattttcttggagatacaatggttaaa
gacaaagggctacattgccaatatatagttgctcaagagccacgaggaaccccagtaagt
gagcgcgccatccctgttgcgatatttgaaacagatgcagaaattgcgaagttctatcta
cggaaatggtgtaaaatttcatctgatgtaggcattcgatccattgttgattggtcctat
tacaagcagcgccttagttcagctattcaaaagattatcactattcctgctgcaatgcag
aaggtttctaaccctgttcctcgagtggttcatcctgattggctacacaaaaaggtccgt
gagaaagaggaccgatttcgccagcgtaagcttgttgatatcttcagtacagtgaacaaa
gatgaaacaatcatgcaagatgagatgaatgttggagacatggaagacttgattgccaaa
aaagatgtttcaaaaggaccccgaccagtagttcatagctatgaagttaacaaagaaaac
tattcatccaagcaatcctgtccagaagctggattaatcttaagccacaagcagcaaaat
gcaactttatgcagacctctcatgtcattgagccaaaatggtacctgtggtgaaagtgtt
gacagaaacatcgattatcaggcatggcttgaagtcaagaagaggaaatggaaagacact
cgtgaggaaaggaagagacgcaggttaggtatcacaaagatgtcacagcaatctgctggt
gcagctaagttgcctgcctccatgttcaactatagacgtggtcaagacagaaatgggntt
agttcgttcttcagaagacaagagttggctcttgtgcaatctcactggcagataatacaa
cttgttcccagtacacaacctgggcgattttttgcttgggttgttgcagatggaattatg
caaaaggttcccatagatgttccaaaagtgttttatcttaacaccaaggcccctgttaca
gaagaatttccgggacggtgtgtgaaaaagattcttcctcatagcagaccaagtttcaat
ctcattgaggttgttatcaatgaagatcagttcagggctgcaaaaaagaaacttgcggct
cacctagcagacccagaagttgaggggatatatgagacaaatatgccgttagaatttaat
gcgatcctccagattggttgtgtgtgtaaagtggacaaggctgctaggcttcgaaatctc
caagatggatggaatctgagcgagctgcatatgaagactacagctgagtgctcttatctg
gagcagactatctccnttttctacctgtatcacagcatgtccgaggggagggcgatatat
gttatatattttcctgtatcatacacaatatttgctgtggttgttaatccttttcaaaac
aaagaattgtcctcgtcacttcttgaaaggctgttccgtgaagcttgccaaacattatcc
gttgaaccaccaatggcaggaagtgctacttacaaggtggaatatgttcgatcaattgaa
gctggcagcaagnctttgcaaagaacattgattgattacagacatcggcatcctggtcct
gctattggtgtcatagaatgcccaaatgttcaagttattagatctggaatgcggatactt
gatgattttccatgcatcagtattccttgcaatgctcgtgacagtaattatcaggctctc
ggatggcaagtcatggctggcaaaattggcatgcaacgttgtgctgcatcatcccagtgg
ttcagtgagagaattttgctatctagatatgcacatgtgcctttggggaatttcgaactt
gattggcttctttttactgtggatgtcttttattctcgggtgttacgtgatcagcagcag
gtactttggatatctgatgatggtattccagatttaggaggcacttatgaggcagatact
tgctttgctgatgaggtcattcaaccagctcttacttatcctggggcctatagaagagtc
acagtagaactaaagattcatcacctagctgtaaatgctcttctgaagagcaaccaagtg
gatgaaatagaaggtggatctatatttggatttgaccatgaaatgcatcatgggcctgtt
gttaatgaaaccgacttcgatgaagctagcgcatgtgcacctgcatttcaagtactaaaa
caactcattcaaagatgtatttcagatgcagtggcatctggaaatgtgtttgctgatgct
atattgcagcatctttaccggtggctttgcagcccactgtcgaaactccatgaccctgct
ctccatcgtgttctccacaaggtcatgaaaaaattatttgcattattgctggccgagttt
cgaaaattaggagccacgattatctttgcaaacttctctaagattgtcatagacactgga
aagatagacctatcagcagcccgtgcttactgtgactgtttattgaaaactttgcagaca
agggatttattcgagtggattgagcttgaacctctgcatttctggcattcgttacttttt
atggatcagtacaactatggaggaattcaggcaaaatccaccactctgtcccatacagac
aatttagaggatgaagctgaagtggacatcgtgtcaagctggaatatagctgaatattta
ccaaagatcacccaggatcattttgtcttaattgtctctgagtttctatatatcccatgg
aagcatttaaaagaacaagttgcaactcggacaactatgagggatgataatgcttgtacc
caatcaatcaccatcacagctgctgaagctcttgaagtttgtgttacggagtaccttaaa
gaccagatcagcaattattttactgagaagcttctcagaattgtacgtgatacacttcac
cacttcaagggaagaaacaaaattgacaagaatgaacctgcatatcatggattatcccaa
tcaactgattctcaagtacataaaggagatgctgcattagaattcattaagcatgtctgc
gctgttcttgctctcgaccagaatgttcagcatgatattctgaggatgaggaagaatctg
ttaaaattggtccatgtgaaagagttcgctccagaagcacagtttaatgatcctagtcca
tcatttattcttccaaatgttatctgcagttattgcaatgactgccgagacctagacctc
tgtcgtgattcagctctttcggataatgaatggcgttgttctgtgccacaatgcggacaa
tcatacaatcgtgaacagatggagaattctctccttcaaatagttcgacaaagagagaag
ctatatcacttgcaggatctggtgtgcctgaggtgcagacaagttaaagctgctcatttg
gctgagcagtgtgtctgtggtgggttattcaggtgcaaagaagattcatttgaattcttg
aggaaaatgcaggtgtttctgaacatagcagccaaccagaaatttcagctgctcgatgac
tgcacatcgtggatcctcgaagtgagataa

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