Elaeis guineensis (African oil palm): 105035438
Help
Entry
105035438 CDS
T03921
Name
(RefSeq) SWI/SNF complex subunit SWI3A homolog isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105035438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105035438
03036 Chromosome and associated proteins [BR:
egu03036
]
105035438
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105035438
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105035438
PBAF complex
105035438
GBAF(ncBAF) complex
105035438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
105035438
NCBI-ProteinID:
XP_010909293
UniProt:
A0A6I9QHD6
LinkDB
All DBs
Position
11:complement(29090746..29111512)
Genome browser
AA seq
550 aa
AA seq
DB search
MMPSSEGDIGRDLYSIPGSSSWFRWDEIHETERRALPEFFDGSAASRNHRVYKEYRDFII
NKFREDPSRRLTFTEVRKSLIGDVGTLHKVFLFLERWGLINFGVSGGRPSPPEEVGPQVE
VEEPGAGVQLVPASAKLPSGRLPVAANDPGAGENGFRLPPLSSYSDVYGDWAPGKGPVCA
VCGDQCASGRHERPMEGGFVVCLKCSENKNGTEEKSAGDNSVHADGNANHASDAWTDAET
LLLLEAVLKHGDDWDLIAQHVRTKNRLDCIERLIQLPFGDHMLSTFSDKYGARNSGNQAT
NSRAIQHASGKLTQVSKTDGHVQNDIKKKVAEESTPVHPSKRRCIPSIANATDSLMRQVA
LLSTVAGPHVAAAAAEAAVTALCNENPCAEKVFIIVDDEARRKLKSFPTNNEPKSDVKVE
DQDVEMHKQTDTPELLPERNFDATAFQIKAAIATALGAAAAHAKQLADQEQREMEHLMAS
IIEAQMRKIQYKIKHFKELEFIMEKEYILIQKLKESLLDKWVEVIQQTFQARIPRWKDHA
FPKSLLNNGS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgagctccgaaggcgacatcggccgcgatctctattccatccctggctcttcc
agctggttccgatgggacgaaatccacgagacggagcggcgggcgctgccggagttcttc
gacggaagcgccgcctcccggaaccatagggtctacaaggagtaccgcgacttcatcatc
aacaagttccgggaagacccctcccgccggctgaccttcacagaggtccggaaatcgctg
attggagacgttgggaccctccacaaggtgttccttttcttggagagatggggtctgatc
aattttggggtatcaggtgggcggccgtcgccgccggaggaggtggggccgcaggttgaa
gtggaggagcctggggctggggtgcaattggtgccggcgtccgcaaagttgccttcgggg
cggttgccggtggccgcaaatgatcctggggctggggagaatgggttcaggttgccgccg
ctgtcgtcgtactcggatgtgtatggggactgggcgccagggaagggccctgtgtgtgcg
gtctgcggcgaccagtgtgcctctggtcgacatgaacgacctatggagggtggttttgtg
gtgtgtttgaaatgttctgaaaataagaatggcactgaagaaaaatcagcaggtgacaat
agtgttcatgctgacggcaatgctaatcatgcaagtgatgcatggacagatgcagagacc
ttgcttcttttagaagctgttctaaagcatggagatgattgggatcttattgcccagcat
gtgcgaacaaagaacagacttgattgtattgaaaggcttatacagcttcctttcggtgac
catatgttgagcaccttcagtgataaatatggtgccagaaactcaggcaaccaagcaacc
aattctagagcaatccaacatgcttctggcaagctaacacaagtgtctaagacagatggt
catgtgcagaatgatatcaagaagaaggttgcagaagaatctactccagtacatccatca
aagcgaagatgcattccatctattgcaaatgctacagattctttgatgagacaggtagct
ctcttgtctacagtagctggcccacatgttgctgccgcagctgcagaggcagctgttact
gcattgtgcaatgagaacccatgtgcagagaaggtctttattattgttgatgatgaagct
agaagaaagcttaaatcattcccaactaacaatgagcctaagagtgatgtgaaggttgag
gatcaggatgtggagatgcataaacaaacagatactccagaactcctgccagagaggaat
tttgatgctacagcattccaaattaaagctgccattgcaacagctcttggggcagcagct
gctcatgccaagcaactagcagaccaagagcagagggaaatggaacacttgatggcatca
attattgaagctcagatgagaaagatccaatataaaatcaagcattttaaggagctggag
ttcattatggagaaggaatacatcttaatacagaagttgaaggaatctcttcttgacaag
tgggtggaggtcattcagcagacatttcaggctaggattccaagatggaaggaccatgct
tttcccaaatctttgttgaacaatggctcctaa
DBGET
integrated database retrieval system
