Elaeis guineensis (African oil palm): 105036041
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Entry
105036041 CDS
T03921
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 27
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egu03041
]
105036041
03009 Ribosome biogenesis [BR:
egu03009
]
105036041
Enzymes [BR:
egu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105036041
Spliceosome [BR:
egu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105036041
Ribosome biogenesis [BR:
egu03009
]
Eukaryotic type
90S particles
Helicases
105036041
Pre-60S particles
105036041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
105036041
NCBI-ProteinID:
XP_010910077
UniProt:
A0A6I9QIS3
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All DBs
Position
2:complement(86884157..86891221)
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AA seq
584 aa
AA seq
DB search
MCASAMEAKKEKKKSKKRKDKPNPRAEEESPIDGKIEKEEEHGEDGSQNSKGMEEEEANG
GGGEGEGHGDDGEEEKAPVAKKQKTGEKKGTGIMTSDPFSRLPLSEPTMTAIEEMGFVNM
TQIQARAIPPLLEGKEVMGAARTGSGKTLAFLIPAVELLYNIKFTARNGTGVIIICPTRE
LAIQTHAVAKDLLKHHSQTLGLVIGGAGRRGEAEHLAKGVNILVATPGRLLDHLQNTKGF
IYKNLMCLIIDEADRILEANFEEDMKQIFKRLPEKRQTALFTATQTKEVEDFAHLSFKGK
PIYIGVDDGRSKVTVEGLQQGYCIVPSNKRFLVLYAFLKRNLSKKIMVFFSSCNSVKYHA
ELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDP
PDEPKEYIHRVGRTARGEGGKGHALLFLLPEELQFLCYLKEAKVPVKEYEFNEKKVPNLQ
SHLEKIVGENYYLNQSAKDAYRSYILAYNSHSMKHIFDVHHLNLKDVAASFCFSNPPKIN
LELESSASKFRKKMRKVDGSRHGISASNPYGRKSGDGERQFSRF
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcttccgccatggaggcgaagaaggagaagaagaagtccaagaagagaaaggac
aaaccaaaccctcgcgccgaagaggagagtcctattgacggcaaaatagaaaaggaggaa
gagcacggagaggacgggtcccagaactccaaaggtatggaggaggaggaggccaatggc
ggcggcggtgaaggagaagggcatggtgacgacggcgaagaggagaaggctcccgttgcc
aagaagcaaaagacgggagagaagaagggcacggggatcatgacatccgatcccttctcc
cggcttccgctttccgagcccaccatgacggccatcgaagagatgggattcgtcaacatg
acccagattcaagctagagcaatcccgcctctgttggaagggaaagaggttatgggagct
gcaaggacaggttcaggaaagactctagctttcttgatacctgcagtcgagttgctgtac
aatatcaagtttactgctaggaatggaactggagttattatcatttgtcccacaagggag
ctggctattcaaacacatgctgtggcgaaggaccttttgaagcatcattcacaaactcta
ggattggttataggtggtgcaggacggaggggagaagctgagcatcttgcaaagggagta
aatatattggtagctacacctggcaggcttttggaccatcttcaaaataccaaggggttt
atatataaaaatttaatgtgtctcataattgatgaagctgatagaatattggaggctaac
tttgaggaagatatgaagcaaatatttaagcgcctacctgagaaaaggcaaacagctctt
tttactgctacacaaacaaaggaggtagaagattttgcacatttgtcatttaaaggaaag
ccaatatacattggagttgatgatggtaggtcaaaggttactgttgaggggttgcagcag
ggttattgcattgttccaagcaacaaaagatttcttgttttatatgcttttctgaagaga
aacctgtccaaaaagatcatggttttcttttcttcctgcaactctgtcaagtaccatgca
gagctcctaaggtatattcaggttgattgttttgatatccatggaaagcaaaagcagcag
aaacggaccaccaccttttttgacttctgcaaagcagagaagggaatcctattgtgcact
gatgttgctgcccgtggactggatatacctgctgtggactggattgtacagtatgatccc
cctgatgaaccaaaggagtatattcatagagttgggcgaacagcccgtggggaaggtggc
aaaggacatgccttgttgtttctgttgcccgaagagttgcaatttctttgctatttgaag
gaagccaaggtgcctgtgaaagaatacgagttcaatgaaaagaaggttccaaatttgcag
tctcacttggagaaaattgtgggagaaaactactatctcaatcagtcagcgaaagatgca
tacagatcctatatcttggcatacaactcacactctatgaagcacatcttcgatgtgcac
cacctcaatctaaaggatgtcgcagcttccttctgttttagtaatccaccaaaaataaat
ctagaattggagagcagcgcatccaagtttaggaagaagatgcgtaaagttgatggcagc
cgccatggtatcagtgcaagcaatccttatggaaggaagagtggtgatggcgaaagacag
ttttcgaggttttag
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