Elaeis guineensis (African oil palm): 105036172
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Entry
105036172 CDS
T03921
Name
(RefSeq) RNA polymerase sigma factor sigA
KO
K03086
RNA polymerase primary sigma factor
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105036172
Transcription machinery [BR:
egu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
105036172
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Virulence_RhuM
Motif
Other DBs
NCBI-GeneID:
105036172
NCBI-ProteinID:
XP_010910226
UniProt:
A0A6I9QJ11
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Position
12:93162508..93168943
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AA seq
508 aa
AA seq
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MAMAAVFGLSRGKRLLSTSFYPSDLAEKLFAVPDHASMQFSTASTKNTIAAKKSSNFSTN
IRSNRHSQAIKALKEHVDTSALSTADTWFQRPDLLEDGESDLEYSLEVLLLLQKSMLEKQ
RKLPFEQIKTVDDPRESCKKTEVIRSGISARKRRTITRMTCFNQNAYMEPLNRVKEGKEL
RSTVSPELLQMHVRGYVRGTISQNLLSHAEVVHLSRKIRAGLSLEENRMKLKEKLGFEPS
DKQLASFLGMSNAELHSKLTECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLIQGGLI
GLLRGIEKFDSSKGCKISTYVYWWIRHGVSRALVENSRTLRLPAHLHERLSLIRNAKVRL
EDKGIIPSIDNIAESLNMSQKKVRNATEAVSKVFSLDREAFPSLNGLPGETLHSYIADKN
LGNNPWHGFENWSLKDEVDKLLRATLNKRERAIIRLYYGIGGECHTWEGISRQFGLSRER
VRQVGLVALEKLKHAARRRRLEALLVKQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggctgcagtttttgggctaagcagaggaaagaggcttctgagcacttcattc
tatccatccgatctcgccgagaagctgtttgctgttccagatcatgcatccatgcaattt
tcaactgcctcaaccaagaatacaatagctgcaaaaaaatcatctaattttagcacaaat
atccgatcaaaccgacactcgcaagctattaaggcgctgaaagagcatgtcgatacttct
gctctttcgactgctgatacctggtttcagaggcctgatctcctagaggatggtgaatct
gatcttgaatattctctagaggtccttcttttgttgcagaaatctatgctggaaaaacaa
aggaagcttccgtttgaacagataaagacagttgatgatcctagagaaagctgcaagaaa
actgaagttattcgttctgggatttctgctcggaaaaggagaacaattaccaggatgaca
tgctttaatcagaatgcttatatggaacctttaaatagagtgaaagagggaaaagaactt
cgctctactgttagtcctgaattgctgcagatgcatgtaagaggttatgtgaggggcacc
ataagtcaaaacctgctcagtcatgcagaggttgtgcatttgtcaaggaaaatcagggct
ggtctttccttggaggagaacagaatgaaactgaaggaaaaattgggttttgaaccctct
gataagcagttggcatcttttttggggatgtcgaatgctgaattgcattcgaaactaact
gaatgttctctagcaagggagaagctagcaatgagtaatgttcgcttggtcatgtctatt
gcccagaaatatgataacctgggtgctgagatggctgacctgattcagggaggcttgatt
ggattgcttcgtgggatagagaaatttgattcttcaaagggctgtaagatttcaacttat
gtctactggtggatacgtcacggtgtttcacgagcactggttgaaaactccagaacttta
aggctacctgcccatttacacgaaagattaagcttgattcggaatgcaaaggttagattg
gaagataaaggaattataccatcaatagataatatcgcagagtcccttaacatgtcacaa
aagaaagtcaggaatgctacagaggctgtcagcaaggtattttctcttgatagggaagcc
tttccctcactgaatggccttccaggcgagacccttcatagctatattgcagataagaat
cttggaaataatccgtggcatggatttgaaaattggtctctcaaggatgaagttgataag
cttctgcgtgcaacacttaacaaacgggagagagccataattagactctattatggcata
ggcggcgaatgccatacgtgggagggtatcagcaggcagtttggcttatcaagagaacga
gttaggcaagtgggtcttgtcgccttggagaaactgaagcatgccgcaaggaggcggcgg
ctggaggcattgttggtgaaacagtga
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