KEGG   Elaeis guineensis (African oil palm): 105036801
Entry
105036801         CDS       T03921                                 
Name
(RefSeq) sm-like protein LSM4 isoform X1
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03018  RNA degradation
egu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105036801
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105036801
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egu03019]
    105036801
   03041 Spliceosome [BR:egu03041]
    105036801
Messenger RNA biogenesis [BR:egu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105036801
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105036801
Spliceosome [BR:egu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105036801
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 105036801
NCBI-ProteinID: XP_073113890
LinkDB
Position
5:complement(26198127..26208085)
AA seq 147 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETTKSRSDRKPPGVGRGRGRGREDGGSGRPAKGIGRGQE
DGGKGGRGKGASGSRGGGGRGGGRGRG
NT seq 444 nt   +upstreamnt  +downstreamnt
atgcttccgttatcgctcctgaagacggcccaagggcatcccatgctggtggagctgaag
aatggggagacgtacaatgggcatttggtgaactgtgatacctggatgaacattcacctt
cgtgaggtcatttgcacttcaaaggatggagataggttttggagaatgcctgaatgctac
attcgagggaacaccattaagtatcttcgagttcctgatgaggtaattgacaaggtccaa
gaagaaactaccaagagccgttcagacagaaagccacctggtgttggccgtggaagggga
agaggtagagaggatggtggcagcggtaggcctgctaaaggcattggacgtggtcaggaa
gatggtggcaaaggtggtcgtggcaagggtgcaagtggcagtagaggtggtggcggcaga
ggtggagggcgcggccgtggctga

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