Elaeis guineensis (African oil palm): 105036801
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Entry
105036801 CDS
T03921
Name
(RefSeq) sm-like protein LSM4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03018
RNA degradation
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105036801
09123 Folding, sorting and degradation
03018 RNA degradation
105036801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105036801
03041 Spliceosome [BR:
egu03041
]
105036801
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105036801
mRNA degradation factors
5'-3' decay
Lsm complex
105036801
Spliceosome [BR:
egu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105036801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
105036801
NCBI-ProteinID:
XP_073113890
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All DBs
Position
5:complement(26198127..26208085)
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AA seq
147 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETTKSRSDRKPPGVGRGRGRGREDGGSGRPAKGIGRGQE
DGGKGGRGKGASGSRGGGGRGGGRGRG
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgttatcgctcctgaagacggcccaagggcatcccatgctggtggagctgaag
aatggggagacgtacaatgggcatttggtgaactgtgatacctggatgaacattcacctt
cgtgaggtcatttgcacttcaaaggatggagataggttttggagaatgcctgaatgctac
attcgagggaacaccattaagtatcttcgagttcctgatgaggtaattgacaaggtccaa
gaagaaactaccaagagccgttcagacagaaagccacctggtgttggccgtggaagggga
agaggtagagaggatggtggcagcggtaggcctgctaaaggcattggacgtggtcaggaa
gatggtggcaaaggtggtcgtggcaagggtgcaagtggcagtagaggtggtggcggcaga
ggtggagggcgcggccgtggctga
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