Elaeis guineensis (African oil palm): 105037942
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Entry
105037942 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
egu01001
]
105037942
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egu04121
]
105037942
Enzymes [BR:
egu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
105037942
Protein kinases [BR:
egu01001
]
Serine/threonine kinases: Other
Other
105037942
Ubiquitin system [BR:
egu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105037942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LisH
ANAPC4_WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
105037942
NCBI-ProteinID:
XP_010911880
UniProt:
A0A6I9QLX2
LinkDB
All DBs
Position
1:10206035..10229458
Genome browser
AA seq
1971 aa
AA seq
DB search
MEEGASSEAAAAAVVAETVEAAEAAALSEEARGENEDEALLTQAQKLISKIVASQANPNP
RLLHTLATMLEAQESRYVQESGSSSFNNARASHSIGRLCNLVRENDEFYEAISSKFLSES
TYSVTIHSAAARILLSCSLAWMYPHVFDDAVLDNIKTWVMEDPVISGDEYNWSQELGSNK
PTDSEMRRTYATGLLAISLTGGAQVVEDILTSGLSAKLMHYLRIRVLGEASSSQRDASFP
TEARPTKSREENRGRSRQVIDTSHLDSPRIADEAFLGDASADRNIAIRQVHGEVCWPDDG
ESLKSELTDSSSEVVGTCDMVEEDANLSCDGCQKRSLLDGKSKYGDRHVADRSSRDEDAD
ENVRDDSSRQGSTWNGQGPEGKECLMKVLENKLIIPSPSSRLQSGGIVWGSCDRNIPKNE
EIKKVVDMKENARGIDGDAFVVGEDNDDRFRECNVGSRDISEMVKKATRAAEAEARAANA
PAEAIKAAGDAAAELVQTAALEVWKNTSDEEAAVFAASEAASTVVDAAIATEVSRSCGKV
DEDLMDAKAVVPKEDEELEDFIILDGESLAQLREKYCIQCLEILGEYVEALGPILHEKGV
DVCLALLQRNFKEEAPDHLALLPEVLKLICALAAHRKFAALFVDRGGIQKLLSVRRVSQN
FFGLSSCLFTIGTLQGVMERVCALPSNVVNQVVDLALQLLECSVDQARKNAAIFFASAFV
FRAVLDSFDTQEGLQKMLNLLHGAASIRXGGNSGTLGMPNVNIRNGRSPAEVLTTSEKQI
AYHTCVALRQYFRAHLLLLVDSLRPNKSSRGVARSNPSARAAYKPLDISNEAMDSVFLQI
QRDRKLGPAFVRARWPVVDKFLASNGHITMLELCQAPPVERYLHDLAQYALGVLHVVTFV
PYSRKLIVNATLSNARVGMAVILDAANGAGYVDPEVIQPALNVLVNLVCPPPSISNKLPV
PAQGQQSASAQTLNGPSENRERHSERYVSDRSVPSAVQNESRECNGESNLAERSAAPLST
PFQGNNSQTPVSSGVVGDRRISLGPGAGCAGLAAQLEQGYHQAREAVRANNGIKVLLHLL
HPRMITPPASLDCIRALACRVLLGLARDETIAHILTKLQVGKKLSELIRDSGSQASGTGQ
GRWQTELAQVAIELIAIVTNSGRASSLAATDAAAPTLRRIERAAIAAATPITYHSRELLL
LIHEHLQASGLTATAALLQKEADLTPLPSLGVLTPPLHQTSVQETSNVQLQWPSGRALCG
FLSEIVKMAPREEDSGLKSDSAMPLLKKKSLVFSSSFSQGKSQPPSHSSVTNKTSSALKS
PSTPNGRAEAPSVSVLKSSTDAEPAFKTPILLPMKRKLMELKELFSSSPAKRLATTEIAL
QSPVSQTPNSGRRICLPTNMAGLSPVASCTPRVPFSRTTLSSGLGDISDDFQYQSTSGAP
TTPMSYLGLPADSQSGNVERMTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPS
RDLNAPANVTARVSTCEFRKHYGGIHASRRDRQFIYSRFRPCRTCRDDTALLTCITFLGD
SSRIAIGCHSSELKIFDAINGNVLDSQACHQTPVTLVQSALSGGSQLVLSSGLYDVRLWD
ATNISGGALHSFEGCKAARFSNSGTIFAALSSDTSRREVLLYDVQTCNMELSLPDSSNSH
TAPVRGHAQSLIHFSPSDTMLLWNGVLWDRRSAVAVHRFDQFTDYGGGGFHPAGNEAIIN
SEVWDLRKFKLLRSVPSLDQTVITFNGGGDVIYAILRRNPEDIMSAVLTRRVRHPLFSAF
RTIDAVSYSDIATVQVDRCVLDFATDPTDSFVGVLTMDDHDEMHSSARLFEVGRKRPTDD
DSDPDDGVDTEEEDNDESEADVEPILGADLDDDGGTDSDDMSNDEDDIDSGYELDEDRDF
NFDDVDDLDLEGGHGLLEIMAEGDEGDEDDSEVLESLSSGEEDFAANAFGF
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaggcgccagttccgaggcggcagcggcggcggtcgtggcggagacggtggag
gcggcggaagcggcggcgttatcggaggaggcgaggggggagaacgaggatgaggccttg
ctcacccaggcgcagaagctgatctccaagatcgtcgcctcccaagcgaatcctaaccct
aggctgctccacaccctcgccaccatgcttgaggcccaagaatctagatatgtgcaagag
tctgggagttcatcttttaacaatgctcgggcatctcatagtatcggaaggctgtgtaac
ttagtgcgggaaaatgatgaattttatgaggctatatcatcaaagtttttgtcagaaagt
acatactctgtcaccattcattcagctgctgcgagaatacttctcagctgctctttagct
tggatgtatcctcatgtttttgatgatgctgtcctggacaatattaaaacttgggtgatg
gaggatcctgtaatttctggtgatgagtacaattggagtcaagaattggggagtaacaag
cctacagattctgaaatgcggaggacttatgctactgggcttcttgctatatcactgacc
gggggtgctcaagtggtagaagatatcttaacatcaggtttgtcagcaaaacttatgcat
tatttgcgcatcagagtccttggagaggccagttctagtcaaagggatgctagttttcca
acagaggctaggcctacaaaaagtagagaagaaaacagaggcagatcacgacaggttatc
gatacgtctcatttagatagtccaaggattgcagatgaagcttttctgggtgatgcaagt
gctgatagaaatattgctatcaggcaagtgcatggagaagtgtgttggccagatgatggt
gagtcattgaaatctgaactcactgattcttcatcagaagttgttggtacatgtgacatg
gttgaagaagacgccaatctttcatgtgatggatgtcagaagagaagtttgcttgatggg
aagtcaaaatatggtgatagacatgttgcagacaggtcttcaagagatgaagatgccgat
gaaaatgtgagggatgactcatcaaggcaaggttcaacatggaatggtcaaggaccagag
ggaaaggaatgtctaatgaaggtccttgaaaataaattgattattccatctcctagttct
cgattacaatcaggtggaattgtttggggttcctgtgataggaatataccaaaaaatgaa
gagatcaaaaaagtggttgatatgaaagagaatgcaagagggattgatggtgatgctttt
gttgtgggagaggataatgatgatagatttagagagtgcaatgttggctcaagggatata
tctgaaatggtaaagaaagcaacaagagctgcggaagcagaagctagagcagctaatgca
cctgctgaggcaatcaaagctgcaggtgatgcagcagctgaacttgtccagactgctgca
ttggaggtttggaaaaatactagtgacgaagaagctgcagttttcgctgcttctgaagct
gcatctactgttgtggatgctgcaatagcaactgaggtctcgcggagttgtggcaaggtt
gacgaggatttgatggatgcaaaagctgtagtacccaaagaggatgaggaactggaagat
ttcattattttggatggtgaatctcttgcacagcttagagaaaaatactgcattcagtgt
cttgaaattttgggagaatatgttgaggctttgggacccattctgcatgagaagggtgtt
gatgtctgccttgccttgttgcaacgcaattttaaagaagaggcacctgatcatttagca
ttgttgcctgaagttctgaaactaatttgtgccctagctgctcatcggaaatttgctgca
ttatttgtggatcgtggtggcatacaaaaacttctctctgttcgtagagtctcacagaac
ttctttggtctttcatcttgcttatttaccattggtactcttcagggtgttatggaacgt
gtttgtgctcttccatccaacgtggtgaatcaggtggttgatttagcacttcaacttcta
gagtgctctgtagatcaagctagaaaaaatgcagctatttttttcgcttctgcatttgtc
ttcagagcagtcttggattcctttgacacacaagagggtctacagaaaatgttaaatctg
ttacatggtgctgcatccattagantcggtgggaactctggaacattaggtatgccaaat
gtaaatatccgaaatggtcgatcccctgcagaagtcctcacaacatcagaaaagcagatt
gcttatcatacttgtgttgcattacgtcagtatttcagagcccatcttctcttgcttgtg
gattctcttcgtccaaataaaagtagtcgtggtgtagcccggagtaatccaagtgcaagg
gctgcatataaaccactggacatcagcaatgaggctatggattcagtgtttctccagata
cagcgtgacaggaagctcgggcctgcatttgtgagagctcgttggcctgtggtggataag
ttcttagcctccaatgggcatataaccatgttggaattgtgtcaggcaccacctgttgaa
cggtatctgcatgatttggcacaatatgcattgggtgttcttcatgttgtcacatttgta
ccctacagccggaaactaattgttaatgctactttgagcaatgcccgtgtaggcatggca
gtcatcttggatgctgccaatggtgctggctatgtagatcctgaggtgatccagccagca
ttaaatgtcttggtaaatctggtatgccctcctccttcgattagtaataaactccctgtt
cctgcacaaggtcaacagtctgcttcagctcaaacattaaatggtccctcagagaatagg
gagaggcattctgagagatatgtctcagatcgtagtgtcccatcagctgttcagaacgag
tctcgggagtgcaatggggaatcaaacttggccgaaagaagtgcagcaccactaagtaca
ccatttcaaggtaataattcacaaacacctgtctcgtcaggtgtagttggagaccggaga
atatctttagggcctggtgctggttgtgccggtcttgctgctcaactggaacaaggatat
catcaggcaagggaagctgtcagggcaaacaatggtataaaggttcttttgcatcttctt
caccctcggatgatcacacctcctgcttctcttgactgcattagggctctggcatgccgt
gtcttgcttggcctagctagagatgaaacaattgcacatatactgacaaagctgcaggtg
gggaagaagctgtcagagcttattcgagattctggcagtcaggcatctggaaccgggcag
ggcaggtggcagactgagctggcccaagtggccatcgagttgattgccatcgtaacaaat
tctgggcgggcaagctccttggcagccactgatgctgctgctcctacactgaggcgcatt
gaaagagctgcaatagctgcagctactcctattacttatcattccagggagctgttactg
ttgattcatgaacatctccaggcatctgggttaacagctactgctgctttgctacagaag
gaggctgacttgacacctctgccatcattgggagtgttgacacctccacttcaccaaact
tcggtccaagaaacttcaaatgtacaacttcagtggccatctggccgtgcactctgtggc
tttctctcagagatagtaaagatggccccacgagaagaggattctggtctaaagtctgat
tcagctatgcctttgttgaagaagaaatcgctggtattctcctccagtttctcacaggga
aaaagtcagcctccatcacattcatccgtcactaataaaacatccagtgccttaaaaagt
ccatctacacctaatgggagagctgaagctccatctgtgtctgttctgaagtccagtaca
gatgcggaacccgcatttaaaacaccaattttgttaccgatgaaacgaaaattaatggaa
ttgaaggaattgttttcctcgtcaccagcaaagcggcttgcaacaacagagattgcactt
cagtctccagttagtcagacaccaaattctggtcgtagaatttgtctgccaacaaatatg
gcaggtctatctcctgtcgcaagttgtactcctcgagttccttttagtcggacaacattg
agcagtggccttggggacatttcagatgattttcagtaccagagcacttctggggcacca
acaacaccaatgtcctatcttggtctgccagctgactctcaatctggaaatgttgaacgg
atgacgcttgactctttggttgtgcaatacttgaagcaccagcatcggcagtgtcctgct
ccaataaccacgctgccaccactctctctcttgcacccacatgtgtgtccagaacctagc
cgagacctgaatgcgcctgcaaatgtgacagcgagggtaagcacctgtgaatttaggaaa
cattatggtgggatccatgccagccgtagagaccgtcaatttatctacagcaggttcagg
ccatgtcggacatgcagagatgatactgccctattaacatgcatcacttttctgggagat
tcttctcgtattgcaattgggtgccactctagtgagctaaagatatttgatgcaattaat
ggaaatgtattggatagtcaggcatgccaccaaactcctgttactcttgttcaatcagcc
ttatctggtggaagtcagctggtcctttcttcaggcttatatgacgtaaggttatgggat
gccaccaacatctctggtggggcattgcattcatttgaaggatgcaaggctgcacgtttt
agtaactcagggaccatttttgcagccctttcatcagacacgtctcgtcgtgaggttctt
ctatatgatgtgcagacctgcaatatggagctgagtctccctgatagctcaaatagccat
actgcccctgtacgagggcatgcacagtctcttatacatttcagtccttcggatacaatg
ttattatggaacggagtcttgtgggataggcggagtgcagttgctgttcatcgatttgac
cagttcacagactatggtggaggtggatttcatcctgctgggaatgaggctattataaat
tcagaggtgtgggatctccggaagttcaagcttctgagaagtgtgccctctctggaccaa
acggtgattacattcaatggaggtggtgatgtcatatatgcaattctcaggcgaaatcca
gaggacatcatgtcagctgttctcacgcgccgtgtacgtcaccctctgttttctgctttc
cgcaccatcgatgctgtgagctactctgatattgctacagtccaagtagaccgctgcgtc
cttgactttgctaccgatcccactgattcttttgttggagtgcttaccatggatgaccat
gacgagatgcactcctctgcacggctgtttgaggttgggaggaaacgacccaccgatgat
gactctgaccccgatgatggggttgacacagaggaggaggataatgatgaatcagaggca
gatgtggaaccgatccttggagctgatttggatgatgatggtggcacagactcagatgac
atgagtaatgatgaggatgatattgacagtgggtatgagctcgatgaggatagggatttt
aattttgatgatgttgatgatttggacttggaaggggggcatggtttgctggaaatcatg
gctgagggtgatgagggagatgaagatgacagcgaggtgctggaatctctcagcagtgga
gaagaggattttgctgccaatgcttttgggttctaa
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integrated database retrieval system
