KEGG   Elaeis guineensis (African oil palm): 105038192
Entry
105038192         CDS       T03921                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
egu  Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:egu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:egu03400]
    105038192
DNA repair and recombination proteins [BR:egu03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    105038192
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-RING_UBOX zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_2 DEAD Prok-RING_4 zf-C3HC4_4 zf-RING_5 ResIII RING_XB3-XBAT31 zf-RING_4 Baculo_IE-1 zf-ANAPC11 MEIOC UBA_Rad5
Other DBs
NCBI-GeneID: 105038192
NCBI-ProteinID: XP_010912212
UniProt: A0A6I9QMJ6
LinkDB
Position
1:103366337..103381319
AA seq 1031 aa
MGNKATEEQIGVVRSVVGRDFSDMDIIRALHMANNDAAAAINIIFDTPHIRLTGEPTAST
TTTATARKKSLTPPVVPDREEVVRRTNMDLPVDPNTDNDAVRPSGPATSRTSDSDWWLVG
SSELSGLSTCKGRRLKAGDRVTFSFPPANTSTSSPSTARFPGRGRSLASCSDIVRFSTQE
HGEIGRIPNEWARCILPLVRANKIRIEGSCKSAPDALGIMDTILLSVSVYINSSMFRKYH
QTSVKPARPASVESTVHPLPNLFRLLGLTPFKKAEITPEDLYSRKRPTASKDSSGVLVPS
ERCRKVSNSGSKIENDHEIISDSDLDNIVGISDRSELEEMVPPETLQCELRPYQKQALHW
MVQIEKGRCFEEAATTLHPCWDAYRLADKRGLVVYLNVFSGDASSEFPSTLEIARGGILA
DAMGLGKTIMTIALLLAYSNQGCSPTSPASQAFLEANERSHMSDQSPNDLKKLIGISGFC
KLLKPKATLVGGGSLIVCPMTLLGQWKAEIETHVQPGALTVYVHYGQSRPKDAKFLAQSD
VVLTTYGVLASEFSAENAEGNGGLYSVRWFRIVLDEAHTIKSSKSQISMAAASLTADRRW
CLTGTPIQNNLEDIYSLLRFLKVEPWADWGLWHKLIQKPYEEGDERGLKLVQSILKPIML
RRTKSSTDRDGRPILVLPPANVEVHYCEMSAAEKDFYEALFRRSKVKFDQFVEQGRVLHN
YASILELLLRLRQCCDHPFLVMSRGDTQEYSNLNKLAKRFLKGGKDADGRDSSAIPSRAY
IKEVVEELRKGEEGECPICLEAFEDAVLTPCAHRLCRECLLASWRSTMSGLCPVCRKSMN
KQDLITAPTDNRFQIDIEKNWVESSKVSVLLRELENLRSLGAKSIVFSQWTAFLDLLQIP
LSRHNLTFVRLDGTLNQQQREKVINEFSEDKNILVLLMSLKAGGVGINLTAASNAFVMDP
WWNPAVEEQAVMRIHRIGQTKNVSIKRFIVKGTVEERMEAVQARKQRLISGALTDQEVRT
ARIEELKMLFT
NT seq 3096 nt   +upstreamnt  +downstreamnt
atggggaacaaggccacggaggagcaaatcggcgtcgtccgctccgtggtcggccgggat
ttctcggatatggacataatccgtgcccttcacatggccaacaacgatgctgccgccgcc
atcaacatcatcttcgacaccccgcacatccgcctcaccggcgaacccaccgcctccact
accactaccgccaccgctcgaaagaaaagcctcactcctcccgtggttccggatcgcgaa
gaggtcgttcggagaaccaacatggatctgcctgtggatcccaataccgacaatgatgcg
gtgcggccgtctggacctgctacctccaggacatcggacagcgactggtggctcgttgga
agctccgagctttctgggctgtcaacatgcaaggggaggcggctcaaggctggcgatagg
gtcaccttctccttccctcccgcaaatacctcgacttcttctccttcaaccgcaagattt
cctggccgagggcggtccctggcttcttgttctgacatcgtgcggttctctactcaagaa
cacggagagattggtcgcatcccaaacgagtgggcacgttgcattttgccgcttgtgagg
gcgaataagatcagaatcgaaggtagctgcaagtctgctccagatgcccttggcatcatg
gacactattctcttgtcagtcagtgtatacatcaacagttcgatgttccgcaagtaccat
cagacatcagtgaagcctgctcgtcctgcatccgtggagtctacagttcatccgcttcca
aacctgtttagattgctcgggcttactcctttcaagaaggctgagattactccagaggac
ctttacagtaggaaacggcccacggcctccaaggacagctctggagtgcttgtaccttca
gaaagatgtagaaaagtatctaatagtggaagcaaaatagaaaatgatcatgagattatt
tcagattctgatttggataatattgtcggaatctcagaccgctcggaattagaggaaatg
gtgccaccagaaactctgcaatgcgagctacgtccttaccaaaaacaggctcttcactgg
atggtgcagattgagaaaggaagatgctttgaggaggcggcaacaactcttcacccatgt
tgggatgcataccgccttgcagataagagaggacttgttgtttacttgaatgtgttttcg
ggtgatgcttctagtgaatttcctagcactcttgaaattgcgagaggagggattctggca
gacgcaatgggactaggaaagacaattatgacaatagctcttcttcttgcctattctaat
caagggtgctcacccacttcccctgcaagtcaggcctttcttgaagctaatgaaaggagc
cacatgtctgatcaatctccaaatgatttgaagaaactaataggcatttctggcttctgc
aagctgttgaaacctaaggctacacttgtaggtggcggtagtctaattgtttgtcctatg
acattgcttggccaatggaaggctgagattgaaacacatgttcagccaggtgctcttact
gtttatgttcactatggacaaagcagaccaaaggatgcaaaatttctagcccagagtgat
gttgtcctgaccacctatggtgtgttagcatcagaattttcagctgagaatgctgaaggt
aatggtgggctttactctgtccggtggttcaggattgtgcttgatgaagcacatactata
aaatcatctaaaagccaaatttccatggctgctgcttctctcactgctgatcggcggtgg
tgtctcacaggcacacctattcaaaacaacctggaggatatatacagtcttcttcggttt
ttgaaagtagagccttgggcagactgggggctgtggcataaactcatacaaaagccatat
gaggaaggtgatgaacgtggattaaagctggtgcagtccatattaaagccaataatgtta
aggagaacgaagtccagcacagatagagatggcaggccaatccttgttctgcctccggca
aatgttgaagtacattattgtgagatgtcagcagctgagaaggacttctatgaggctctg
tttagaagatcaaaggtaaagttcgaccagtttgttgagcaagggcgtgttcttcacaat
tatgcttcaatattggagttgcttttacgccttcgtcaatgttgtgatcatccattcctt
gtaatgagccgtggtgatacacaagaatactccaatctgaacaaactggcaaagcggttc
cttaaaggtggtaaggatgctgatggcagagactctagtgctatcccttcaagggcatac
attaaagaggttgtggaagagttgcgtaaaggcgaagaaggagagtgtccaatttgccta
gaagcttttgaagatgcagtattaacaccatgcgctcaccgtttgtgtcgggaatgcctc
ttggctagttggcggagcaccatgagtggtctttgccctgtttgtaggaaatccatgaat
aagcaagatcttataaccgctcctactgataatcgattccagatagatattgagaagaat
tgggtagaatcctcaaaagtttcagttcttcttcgagaactggaaaaccttcgtagtctt
ggtgccaaaagcattgtctttagccagtggactgcttttttggatcttctccagatccct
ctttctcgacacaatctcacatttgttcgactggacgggaccttaaatcaacagcaacgg
gaaaaagtaataaatgagttttcagaggataagaatatattggtattacttatgtcatta
aaggctggtggagttggaataaaccttactgcagcatctaatgcctttgtcatggacccc
tggtggaacccagctgttgaggaacaggctgtgatgcgcattcatcgtattggtcaaact
aagaacgtatctatcaaaagattcattgtaaagggaacagtggaggaaagaatggaagct
gtgcaggcacgaaaacagaggctgatctctggggccctaactgatcaggaagttcgcact
gcacgcatagaagaactgaaaatgctcttcacttag

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